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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:232145..234531+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011293-T1 ID=KJC3_011293-T1|Name=KJC3_011293-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2387bp|location=Sequence derived from alignment at ch8:232145..234531+ (Aspergillus niger KJC3)
TCTACACCCCGTTCAAGCAGACTTCCGTCTGGGATCTCCTCCTGGCAAGC
CCCCGATGATCATTCAATCGGCAATCGCAATGAGGAATGGCAGCCGTTCG
CGGTGGGTCTCCCGAGTGCAGGACGGATAAATCGGATGCTGGCCTAGGGT
GCCACACCAGTGGAGGCAAGCAAGCTGTTTTCGTTTATTATTCAGGCTAG
ACCCCCATCGCTCAGCCTTTGTCTGTCCCTGTTGGTCCCTTTGCGTGCAA
GCACATCCTGTTATCCCTGGCTTCAGGGCCCGTCGTCCAGATCAGACCAG
ATCCTGCTCCCTGCTGGCTGCCAATATGTCTCCCATCGACGAGCAACTAG
AGATGGCGGAGGTCGATGCTCGGCCCCATACTAATGGCGCGAGCAAGGAG
GAAGGCCTCGAGAGGCCATCATCCTCAGGTACCACTGGCTCGACCGGTTA
CAGTAGCTCGCTTGAATACAATCCCCAGCTGCACACCCTTCATTCGCGGA
ACACCGAACTCGATCTAGAGCGTCATCGCACGGCCACTTCCCATGCCCTA
AGCAGGATCGAAACCCAGCGGCTTCAGCATCAGTTGACCGTGGGTGAAAG
TGTCAAGTCTCGCGCCTCCCGCACGCCTTTGCCTCGTATGGGCGCCAACA
AGGATTACCCACCACCTCTTCCCGATCGCGAGGACTACGTCGTCGAGTTT
GACGGTCCAGAAGATCCTTTATACCCTCAGAACTGGGAATTGGGGACGAA
GTATGCCTTTCCAACCCTGTCGCGCATGAAAGACATGTTGGTCGACCGAA
TACTGACTTATGTTCTCGCCTAGGATTTACATTAGCGCCATCCTCGCCTT
CACCAGTATCTGCAGTACCTTCGATTCCGCTATCTTTAGTTCCTCTACCA
CCAACGTTGCGCGGGTATTCGGTGTAGGTATTGAAGTCGCCACCCTGTCG
AGTTCGTTGTATATCTGCGGTTATGCGTCCGGTCCCCTGGTGTGGGCTCC
CCTTTCCGAGCTGAAGGGACGGAAGCCACCCATTGTGGTGGCTATGTTGG
GATTCGGTATCTTCAACACCGCTGTCGCCGTCGCCAAGGACCTGCAGACG
ATCATGATCTGTCGCTTCTTCTGTGGTGTCTTTGGCAGTTGTCCGCTGGC
GGTTGTGGCTGCCGTTTTCTCCGATATCTATAACAACCGCACTCGTGGTG
TTGCCATTGCCATGTTTTCCAGCACAGTGTTCTTGGGTCCGCTTCTGGCT
CCGTTTATCGGTGGTTTCATTAATACGTCGTACCTGGGTTGGCGCTGGAC
CGCCTACATCCCCGCGTTCATGGGCTATGCCGCCTTCGTGTTGAACATGT
TCTTCCTGAAGGAATCCTATCCGCCGATCATCCTGGTCTCGAAGGCTTCA
GAACTGCGCCGTCGCACCAAGAACTGGGGCATCCACGCCAAACAGGAGGA
AATCGAGGTTGACTTGCGGGAGTTGCTGGTGAACAACTTTTCCCGTCCCC
TTCGGTTGCTCTTTGGCGAGCCATTGATTCTGGCGGTGACGATTTACCTC
AGTTTCATCTATGGCCTGTTGTACTGCTTCTTGACAGCCTACACACTCGT
CTTCCAGGGCGTGTACGGTATGTCTGCTGGAGTTGGCGGATTGACGTTGT
TTGGCATGGTGGTCGGTTTGTTCATTGCGGCCTCTTATATCATTTTCGCC
AGTCGCGGGTACAACAAGAAGTTGGAAGCGAATGGGGGCATTCCCGTCCC
TGAATGGCGTCTGCCGCCTGTGATTATCGGTGGTGCGCTCTTCGCTGGAG
GACTATTCTGGTTCGGTTGGACCGGATTCACGAAGAGTATCCATTGGATT
GTACCCACACTGAGTGGATTGTTCACTGGATTTGGTCTGTTGATCATCTT
CATCCAGTTGTTTAACTATCTGATCGACACCTACCTTATGTTGTAAGTTG
CCTTGCCTTACTCGTTGTTAGTGGACCCTGTTCTAATCATCATTCCAGTG
CCGCATCGGCTATCGCAGCGAACACCTTCTGTCGTTCCCTAGTGGCAGCC
AGCTTCCCCCTCTTCTCACGTCAAATGTTTAACAACATGGGCATCCAGTG
GGCTGCCACGCTGCTGGGCTGTGTGGCGTCTATCCTGGTGCCCATCCCGG
TTGCTTTCTATTTCTATGGTAAAAACCTGAGGAAGCGGAGCAAGTTTGCG
CCGTTTTATGACAAGGTTGCTGAGTCTCATGCGGAGGATCCAGTGGAGGA
GAACGGAGTCGCGGAGCACTAAACGCTTCCTTAATAAACAAAAGTTTTGC
ATATAGCTATCTGGGCGGTTGCATTTTTTCCATACCCTGTACATTATTAA
TGTTAATGTGGATAATCAGAAGACAAGTAATGATCAG back to topCoding sequence (CDS) from alignment at ch8:232145..234531+ >KJC3_011293-T1 ID=KJC3_011293-T1|Name=KJC3_011293-T1|organism=Aspergillus niger KJC3|type=CDS|length=5454bp|location=Sequence derived from alignment at ch8:232145..234531+ (Aspergillus niger KJC3)
ATGTCTCCCATCGACGAGCAACTAGAGATGGCGGAGGTCGATGCTCGGCC
CCATACTAATGGCGCGAGCAAGGAGGAAGGCCTCGAGAGGCCATCATCCT
CAGGTACCACTGGCTCGACCGGTTACAGTAGCTCGCTTGAATACAATCCC
CAGCTGCACACCCTTCATTCGCGGAACACCGAACTCGATCTAGAGCGTCA
TCGCACGGCCACTTCCCATGCCCTAAGCAGGATCGAAACCCAGCGGCTTC
AGCATCAGTTGACCGTGGGTGAAAGTGTCAAGTCTCGCGCCTCCCGCACG
CCTTTGCCTCGTATGGGCGCCAACAAGGATTACCCACCACCTCTTCCCGA
TCGCGAGGACTACGTCGTCGAGTTTGACGGTCCAGAAGATCCTTTATACC
CTCAGAACTGGGAATTGGGGACGAAGATTTACATTAGCGCCATCCTCGCC
TTCACCAGTATCTGCAGTACCTTCGATTCCGCTATCTTTAGTTCCTCTAC
CACCAACGTTGCGCGGGTATTCGGTGTAGGTATTGAAGTCGCCACCCTGT
CGAGTTCGTTGTATATCTGCGGTTATGCGTCCGGTCCCCTGGTGTGGGCT
CCCCTTTCCGAGCTGAAGGGACGGAAGCCACCCATTGTGGTGGCTATGTT
GGGATTCGGTATCTTCAACACCGCTGTCGCCGTCGCCAAGGACCTGCAGA
CGATCATGATCTGTCGCTTCTTCTGTGGTGTCTTTGGCAGTTGTCCGCTG
GCGGTTGTGGCTGCCGTTTTCTCCGATATCTATAACAACCGCACTCGTGG
TGTTGCCATTGCCATGTTTTCCAGCACAGTGTTCTTGGGTCCGCTTCTGG
CTCCGTTTATCGGTGGTTTCATTAATACGTCGTACCTGGGTTGGCGCTGG
ACCGCCTACATCCCCGCGTTCATGGGCTATGCCGCCTTCGTGTTGAACAT
GTTCTTCCTGAAGGAATCCTATCCGCCGATCATCCTGGTCTCGAAGGCTT
CAGAACTGCGCCGTCGCACCAAGAACTGGGGCATCCACGCCAAACAGGAG
GAAATCGAGGTTGACTTGCGGGAGTTGCTGGTGAACAACTTTTCCCGTCC
CCTTCGGTTGCTCTTTGGCGAGCCATTGATTCTGGCGGTGACGATTTACC
TCAGTTTCATCTATGGCCTGTTGTACTGCTTCTTGACAGCCTACACACTC
GTCTTCCAGGGCGTGTACGGTATGTCTGCTGGAGTTGGCGGATTGACGTT
GTTTGGCATGGTGGTCGGTTTGTTCATTGCGGCCTCTTATATCATTTTCG
CCAGTCGCGGGTACAACAAGAAGTTGGAAGCGAATGGGGGCATTCCCGTC
CCTGAATGGCGTCTGCCGCCTGTGATTATCGGTGGTGCGCTCTTCGCTGG
AGGACTATTCTGGTTCGGTTGGACCGGATTCACGAAGAGTATCCATTGGA
TTGTACCCACACTGAGTGGATTGTTCACTGGATTTGGTCTGTTGATCATC
TTCATCCAGTTGTTTAACTATCTGATCGACACCTACCTTATGTTTGCCGC
ATCGGCTATCGCAGCGAACACCTTCTGTCGTTCCCTAGTGGCAGCCAGCT
TCCCCCTCTTCTCACGTCAAATGTTTAACAACATGGGCATCCAGTGGGCT
GCCACGCTGCTGGGCTGTGTGGCGTCTATCCTGGTGCCCATCCCGGTTGC
TTTCTATTTCTATGGTAAAAACCTGAGGAAGCGGAGCAAGTTTGCGCCGT
TTTATGACAAGGTTGCTGAGTCTCATGCGGAGGATCCAGTGGAGGAGAAC
GGAGTCGCGGAGCACTAAATGTCTCCCATCGACGAGCAACTAGAGATGGC
GGAGGTCGATGCTCGGCCCCATACTAATGGCGCGAGCAAGGAGGAAGGCC
TCGAGAGGCCATCATCCTCAGGTACCACTGGCTCGACCGGTTACAGTAGC
TCGCTTGAATACAATCCCCAGCTGCACACCCTTCATTCGCGGAACACCGA
ACTCGATCTAGAGCGTCATCGCACGGCCACTTCCCATGCCCTAAGCAGGA
TCGAAACCCAGCGGCTTCAGCATCAGTTGACCGTGGGTGAAAGTGTCAAG
TCTCGCGCCTCCCGCACGCCTTTGCCTCGTATGGGCGCCAACAAGGATTA
CCCACCACCTCTTCCCGATCGCGAGGACTACGTCGTCGAGTTTGACGGTC
CAGAAGATCCTTTATACCCTCAGAACTGGGAATTGGGGACGAAGATTTAC
ATTAGCGCCATCCTCGCCTTCACCAGTATCTGCAGTACCTTCGATTCCGC
TATCTTTAGTTCCTCTACCACCAACGTTGCGCGGGTATTCGGTGTAGGTA
TTGAAGTCGCCACCCTGTCGAGTTCGTTGTATATCTGCGGTTATGCGTCC
GGTCCCCTGGTGTGGGCTCCCCTTTCCGAGCTGAAGGGACGGAAGCCACC
CATTGTGGTGGCTATGTTGGGATTCGGTATCTTCAACACCGCTGTCGCCG
TCGCCAAGGACCTGCAGACGATCATGATCTGTCGCTTCTTCTGTGGTGTC
TTTGGCAGTTGTCCGCTGGCGGTTGTGGCTGCCGTTTTCTCCGATATCTA
TAACAACCGCACTCGTGGTGTTGCCATTGCCATGTTTTCCAGCACAGTGT
TCTTGGGTCCGCTTCTGGCTCCGTTTATCGGTGGTTTCATTAATACGTCG
TACCTGGGTTGGCGCTGGACCGCCTACATCCCCGCGTTCATGGGCTATGC
CGCCTTCGTGTTGAACATGTTCTTCCTGAAGGAATCCTATCCGCCGATCA
TCCTGGTCTCGAAGGCTTCAGAACTGCGCCGTCGCACCAAGAACTGGGGC
ATCCACGCCAAACAGGAGGAAATCGAGGTTGACTTGCGGGAGTTGCTGGT
GAACAACTTTTCCCGTCCCCTTCGGTTGCTCTTTGGCGAGCCATTGATTC
TGGCGGTGACGATTTACCTCAGTTTCATCTATGGCCTGTTGTACTGCTTC
TTGACAGCCTACACACTCGTCTTCCAGGGCGTGTACGGTATGTCTGCTGG
AGTTGGCGGATTGACGTTGTTTGGCATGGTGGTCGGTTTGTTCATTGCGG
CCTCTTATATCATTTTCGCCAGTCGCGGGTACAACAAGAAGTTGGAAGCG
AATGGGGGCATTCCCGTCCCTGAATGGCGTCTGCCGCCTGTGATTATCGG
TGGTGCGCTCTTCGCTGGAGGACTATTCTGGTTCGGTTGGACCGGATTCA
CGAAGAGTATCCATTGGATTGTACCCACACTGAGTGGATTGTTCACTGGA
TTTGGTCTGTTGATCATCTTCATCCAGTTGTTTAACTATCTGATCGACAC
CTACCTTATGTTTGCCGCATCGGCTATCGCAGCGAACACCTTCTGTCGTT
CCCTAGTGGCAGCCAGCTTCCCCCTCTTCTCACGTCAAATGTTTAACAAC
ATGGGCATCCAGTGGGCTGCCACGCTGCTGGGCTGTGTGGCGTCTATCCT
GGTGCCCATCCCGGTTGCTTTCTATTTCTATGGTAAAAACCTGAGGAAGC
GGAGCAAGTTTGCGCCGTTTTATGACAAGGTTGCTGAGTCTCATGCGGAG
GATCCAGTGGAGGAGAACGGAGTCGCGGAGCACTAAATGTCTCCCATCGA
CGAGCAACTAGAGATGGCGGAGGTCGATGCTCGGCCCCATACTAATGGCG
CGAGCAAGGAGGAAGGCCTCGAGAGGCCATCATCCTCAGGTACCACTGGC
TCGACCGGTTACAGTAGCTCGCTTGAATACAATCCCCAGCTGCACACCCT
TCATTCGCGGAACACCGAACTCGATCTAGAGCGTCATCGCACGGCCACTT
CCCATGCCCTAAGCAGGATCGAAACCCAGCGGCTTCAGCATCAGTTGACC
GTGGGTGAAAGTGTCAAGTCTCGCGCCTCCCGCACGCCTTTGCCTCGTAT
GGGCGCCAACAAGGATTACCCACCACCTCTTCCCGATCGCGAGGACTACG
TCGTCGAGTTTGACGGTCCAGAAGATCCTTTATACCCTCAGAACTGGGAA
TTGGGGACGAAGATTTACATTAGCGCCATCCTCGCCTTCACCAGTATCTG
CAGTACCTTCGATTCCGCTATCTTTAGTTCCTCTACCACCAACGTTGCGC
GGGTATTCGGTGTAGGTATTGAAGTCGCCACCCTGTCGAGTTCGTTGTAT
ATCTGCGGTTATGCGTCCGGTCCCCTGGTGTGGGCTCCCCTTTCCGAGCT
GAAGGGACGGAAGCCACCCATTGTGGTGGCTATGTTGGGATTCGGTATCT
TCAACACCGCTGTCGCCGTCGCCAAGGACCTGCAGACGATCATGATCTGT
CGCTTCTTCTGTGGTGTCTTTGGCAGTTGTCCGCTGGCGGTTGTGGCTGC
CGTTTTCTCCGATATCTATAACAACCGCACTCGTGGTGTTGCCATTGCCA
TGTTTTCCAGCACAGTGTTCTTGGGTCCGCTTCTGGCTCCGTTTATCGGT
GGTTTCATTAATACGTCGTACCTGGGTTGGCGCTGGACCGCCTACATCCC
CGCGTTCATGGGCTATGCCGCCTTCGTGTTGAACATGTTCTTCCTGAAGG
AATCCTATCCGCCGATCATCCTGGTCTCGAAGGCTTCAGAACTGCGCCGT
CGCACCAAGAACTGGGGCATCCACGCCAAACAGGAGGAAATCGAGGTTGA
CTTGCGGGAGTTGCTGGTGAACAACTTTTCCCGTCCCCTTCGGTTGCTCT
TTGGCGAGCCATTGATTCTGGCGGTGACGATTTACCTCAGTTTCATCTAT
GGCCTGTTGTACTGCTTCTTGACAGCCTACACACTCGTCTTCCAGGGCGT
GTACGGTATGTCTGCTGGAGTTGGCGGATTGACGTTGTTTGGCATGGTGG
TCGGTTTGTTCATTGCGGCCTCTTATATCATTTTCGCCAGTCGCGGGTAC
AACAAGAAGTTGGAAGCGAATGGGGGCATTCCCGTCCCTGAATGGCGTCT
GCCGCCTGTGATTATCGGTGGTGCGCTCTTCGCTGGAGGACTATTCTGGT
TCGGTTGGACCGGATTCACGAAGAGTATCCATTGGATTGTACCCACACTG
AGTGGATTGTTCACTGGATTTGGTCTGTTGATCATCTTCATCCAGTTGTT
TAACTATCTGATCGACACCTACCTTATGTTTGCCGCATCGGCTATCGCAG
CGAACACCTTCTGTCGTTCCCTAGTGGCAGCCAGCTTCCCCCTCTTCTCA
CGTCAAATGTTTAACAACATGGGCATCCAGTGGGCTGCCACGCTGCTGGG
CTGTGTGGCGTCTATCCTGGTGCCCATCCCGGTTGCTTTCTATTTCTATG
GTAAAAACCTGAGGAAGCGGAGCAAGTTTGCGCCGTTTTATGACAAGGTT
GCTGAGTCTCATGCGGAGGATCCAGTGGAGGAGAACGGAGTCGCGGAGCA
CTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011293-T1.utr5p1 | KJC3_011293-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011293-T1.utr3p1 | KJC3_011293-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:232145..234531 + |
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