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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:238573..240472+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011296-T1 ID=KJC3_011296-T1|Name=KJC3_011296-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1900bp|location=Sequence derived from alignment at ch8:238573..240472+ (Aspergillus niger KJC3) CCTCACCCACATCCCTTACCGCAACCCCGCAAAGCGAATCTCACCCTCTC
TCATTATGCTGGTCTACCTTACCAACTTCTTCATAGCATGGCTCGCCTAC
TTTTGGCAGCCGAAGCAACAACCCTGCGGTAGTTTAACCCTGCCACATAT
CCCCGGGGTTGACATCATATCCATGACGCGCCAAGAGGTCCATAACTACA
GCGTAGCAACCTCCCCGCCATACAATCTCGCAGACGTACACAATCTTGAC
TTCTGCAACGTATCCGTCACTCTGACTCACCCTGGTGAAGATGACACCGT
CTCCGTCTCCGTCTGGCTCCCCCTAAACAACTGGAACGGCCGTTTCCAGG
CTACTGGTGGCGGCGGCCTCGCAGCCGGTATCATTGGCTTAGCACCAGCT
CACCCAGTCAGCCAGGGCTACGCAACAGCTGCTACCGATGGCGGACTAAC
CTTGAATGGAACCAGTAATCCCCAGACGGGGGCCTGGATTCTGCGCCCCG
ACGGTTCCATCAACACTGCTCTGCTACTGAACTTTGCCCATCGCTCGATC
TATGACATGACTATCATCGGGAAGACTCTCGCCGAGCGCTTCTACGGATC
CCCGCCAAGATACTCCTACTGGAGCGGCTGCTCTACCGGCGGCAGGCAGG
GATACTTTGCTGCAGCAAAGTATCCGAATCTCTTCGATGGAGTTCTAGCC
GGTGCACCGGCCCTCAATTTCCCACGTTTGATCGGGTATATGTTCTGGCC
GCCGGTGCATATGTTCCATTCCGCCGCGCCACCACAGTGCGTCTTTGACA
CCTTTTGGAAAGCAATTATAGACGAATGCGATCCACTTGATGGAGCCACG
GACGGGTTGATATCGGATTACAATCCACAGAGCTGCCCATTCAATCCCGA
AACACTTGTTGGGCACACGGTAACCTGTCCGGAGATGGGCTCAGATTCCC
CAGTGACCATCACAGCCCAGCACGCCACCCTCGTCAAGCAAATCCTGCAG
GGCCCTGATCTACAAGATCACCCCGACCTCTGGACAGGCCTTCCACCGGG
CGCCTCATTCCGCGGAACGGCAAACACTCAAGTAATCAACGGATCCATCG
TCAGGCCCGTCCCCTTCTTCCCCATCATCGGCTGGATTAAGAACTTCGTT
TATCGGGACCCGGACTACAACGTATTCGACATGACCTTCGACGACTTCAA
CACCGCCTACCGCCTCACGCTGGACGGTTACAATGGCATTCTCGGATCGG
ATGATCTGAATCTCTCTGAGTTTCGTCGTGCAGGGGGGAAGCTATTGACC
TGGCACGGGTTGGCGGATGAGTTAATTCCAGCGTCATGGACGAACGCATT
CTGGGAGGGGATTGATAAGACGGACGGTGCGGATGTGGATGAGTTCTATC
GGGTTTTCCTTGCCCCTGGCCTGGGTCACTGCTCGGCTGGGCATGGACCG
AAACCCGTTGATCTGTTGGGCGCATTGGTGCGCTGGGTGGAGGAAGGGAT
TGCGCCTGATAGGTTGAGTGCGGCGGCTGTCAAGGCGGATGGGAAGGAGG
TGACGAGGGAGTTGTGTCGGTATCCGGCGACGCTGGTGTACGATGGGCAT
GGGGATGTGAATGATGCGGGGAGTTTTTCGTGTAGGCCTCGGGAGGGGTG
AGGCTTAGGGAGTTATATAGTATAGATATATACTACGATTGTAGTGGTAT
TTGTGGGGGCTTAGAAGTGGGACTTCAGTACTAGCTTAAGACTGATTGAG
TTGGGATCTAACGGGATAGAAGATGCTTCGGTATTTGATGCTATGAGGCG
TTTAACGAACTGGCTAATTTCGGGCTTCAATTTGGTTAACATTGAATGGG
TTTACAATAGTGTGCTGGGACACATACTGATACGGATTACTTTGACCACA
back to topCoding sequence (CDS) from alignment at ch8:238573..240472+ >KJC3_011296-T1 ID=KJC3_011296-T1|Name=KJC3_011296-T1|organism=Aspergillus niger KJC3|type=CDS|length=1596bp|location=Sequence derived from alignment at ch8:238573..240472+ (Aspergillus niger KJC3) ATGCTGGTCTACCTTACCAACTTCTTCATAGCATGGCTCGCCTACTTTTG GCAGCCGAAGCAACAACCCTGCGGTAGTTTAACCCTGCCACATATCCCCG GGGTTGACATCATATCCATGACGCGCCAAGAGGTCCATAACTACAGCGTA GCAACCTCCCCGCCATACAATCTCGCAGACGTACACAATCTTGACTTCTG CAACGTATCCGTCACTCTGACTCACCCTGGTGAAGATGACACCGTCTCCG TCTCCGTCTGGCTCCCCCTAAACAACTGGAACGGCCGTTTCCAGGCTACT GGTGGCGGCGGCCTCGCAGCCGGTATCATTGGCTTAGCACCAGCTCACCC AGTCAGCCAGGGCTACGCAACAGCTGCTACCGATGGCGGACTAACCTTGA ATGGAACCAGTAATCCCCAGACGGGGGCCTGGATTCTGCGCCCCGACGGT TCCATCAACACTGCTCTGCTACTGAACTTTGCCCATCGCTCGATCTATGA CATGACTATCATCGGGAAGACTCTCGCCGAGCGCTTCTACGGATCCCCGC CAAGATACTCCTACTGGAGCGGCTGCTCTACCGGCGGCAGGCAGGGATAC TTTGCTGCAGCAAAGTATCCGAATCTCTTCGATGGAGTTCTAGCCGGTGC ACCGGCCCTCAATTTCCCACGTTTGATCGGGTATATGTTCTGGCCGCCGG TGCATATGTTCCATTCCGCCGCGCCACCACAGTGCGTCTTTGACACCTTT TGGAAAGCAATTATAGACGAATGCGATCCACTTGATGGAGCCACGGACGG GTTGATATCGGATTACAATCCACAGAGCTGCCCATTCAATCCCGAAACAC TTGTTGGGCACACGGTAACCTGTCCGGAGATGGGCTCAGATTCCCCAGTG ACCATCACAGCCCAGCACGCCACCCTCGTCAAGCAAATCCTGCAGGGCCC TGATCTACAAGATCACCCCGACCTCTGGACAGGCCTTCCACCGGGCGCCT CATTCCGCGGAACGGCAAACACTCAAGTAATCAACGGATCCATCGTCAGG CCCGTCCCCTTCTTCCCCATCATCGGCTGGATTAAGAACTTCGTTTATCG GGACCCGGACTACAACGTATTCGACATGACCTTCGACGACTTCAACACCG CCTACCGCCTCACGCTGGACGGTTACAATGGCATTCTCGGATCGGATGAT CTGAATCTCTCTGAGTTTCGTCGTGCAGGGGGGAAGCTATTGACCTGGCA CGGGTTGGCGGATGAGTTAATTCCAGCGTCATGGACGAACGCATTCTGGG AGGGGATTGATAAGACGGACGGTGCGGATGTGGATGAGTTCTATCGGGTT TTCCTTGCCCCTGGCCTGGGTCACTGCTCGGCTGGGCATGGACCGAAACC CGTTGATCTGTTGGGCGCATTGGTGCGCTGGGTGGAGGAAGGGATTGCGC CTGATAGGTTGAGTGCGGCGGCTGTCAAGGCGGATGGGAAGGAGGTGACG AGGGAGTTGTGTCGGTATCCGGCGACGCTGGTGTACGATGGGCATGGGGA TGTGAATGATGCGGGGAGTTTTTCGTGTAGGCCTCGGGAGGGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_011296-T1.utr5p1 | KJC3_011296-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_011296-T1.utr3p1 | KJC3_011296-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | SECRETED:SignalP(1-16) |
DBxref | InterPro:IPR029058 |
DBxref | InterPro:IPR011118 |
DBxref | PFAM:PF07519 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:238573..240472 + |
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