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KJC3_011296-T1, KJC3_011296-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011296-T1
Unique NameKJC3_011296-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:238573..240472+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011296-T1 ID=KJC3_011296-T1|Name=KJC3_011296-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1900bp|location=Sequence derived from alignment at ch8:238573..240472+ (Aspergillus niger KJC3)
CCTCACCCACATCCCTTACCGCAACCCCGCAAAGCGAATCTCACCCTCTC TCATTATGCTGGTCTACCTTACCAACTTCTTCATAGCATGGCTCGCCTAC TTTTGGCAGCCGAAGCAACAACCCTGCGGTAGTTTAACCCTGCCACATAT CCCCGGGGTTGACATCATATCCATGACGCGCCAAGAGGTCCATAACTACA GCGTAGCAACCTCCCCGCCATACAATCTCGCAGACGTACACAATCTTGAC TTCTGCAACGTATCCGTCACTCTGACTCACCCTGGTGAAGATGACACCGT CTCCGTCTCCGTCTGGCTCCCCCTAAACAACTGGAACGGCCGTTTCCAGG CTACTGGTGGCGGCGGCCTCGCAGCCGGTATCATTGGCTTAGCACCAGCT CACCCAGTCAGCCAGGGCTACGCAACAGCTGCTACCGATGGCGGACTAAC CTTGAATGGAACCAGTAATCCCCAGACGGGGGCCTGGATTCTGCGCCCCG ACGGTTCCATCAACACTGCTCTGCTACTGAACTTTGCCCATCGCTCGATC TATGACATGACTATCATCGGGAAGACTCTCGCCGAGCGCTTCTACGGATC CCCGCCAAGATACTCCTACTGGAGCGGCTGCTCTACCGGCGGCAGGCAGG GATACTTTGCTGCAGCAAAGTATCCGAATCTCTTCGATGGAGTTCTAGCC GGTGCACCGGCCCTCAATTTCCCACGTTTGATCGGGTATATGTTCTGGCC GCCGGTGCATATGTTCCATTCCGCCGCGCCACCACAGTGCGTCTTTGACA CCTTTTGGAAAGCAATTATAGACGAATGCGATCCACTTGATGGAGCCACG GACGGGTTGATATCGGATTACAATCCACAGAGCTGCCCATTCAATCCCGA AACACTTGTTGGGCACACGGTAACCTGTCCGGAGATGGGCTCAGATTCCC CAGTGACCATCACAGCCCAGCACGCCACCCTCGTCAAGCAAATCCTGCAG GGCCCTGATCTACAAGATCACCCCGACCTCTGGACAGGCCTTCCACCGGG CGCCTCATTCCGCGGAACGGCAAACACTCAAGTAATCAACGGATCCATCG TCAGGCCCGTCCCCTTCTTCCCCATCATCGGCTGGATTAAGAACTTCGTT TATCGGGACCCGGACTACAACGTATTCGACATGACCTTCGACGACTTCAA CACCGCCTACCGCCTCACGCTGGACGGTTACAATGGCATTCTCGGATCGG ATGATCTGAATCTCTCTGAGTTTCGTCGTGCAGGGGGGAAGCTATTGACC TGGCACGGGTTGGCGGATGAGTTAATTCCAGCGTCATGGACGAACGCATT CTGGGAGGGGATTGATAAGACGGACGGTGCGGATGTGGATGAGTTCTATC GGGTTTTCCTTGCCCCTGGCCTGGGTCACTGCTCGGCTGGGCATGGACCG AAACCCGTTGATCTGTTGGGCGCATTGGTGCGCTGGGTGGAGGAAGGGAT TGCGCCTGATAGGTTGAGTGCGGCGGCTGTCAAGGCGGATGGGAAGGAGG TGACGAGGGAGTTGTGTCGGTATCCGGCGACGCTGGTGTACGATGGGCAT GGGGATGTGAATGATGCGGGGAGTTTTTCGTGTAGGCCTCGGGAGGGGTG AGGCTTAGGGAGTTATATAGTATAGATATATACTACGATTGTAGTGGTAT TTGTGGGGGCTTAGAAGTGGGACTTCAGTACTAGCTTAAGACTGATTGAG TTGGGATCTAACGGGATAGAAGATGCTTCGGTATTTGATGCTATGAGGCG TTTAACGAACTGGCTAATTTCGGGCTTCAATTTGGTTAACATTGAATGGG TTTACAATAGTGTGCTGGGACACATACTGATACGGATTACTTTGACCACA
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Coding sequence (CDS) from alignment at ch8:238573..240472+

>KJC3_011296-T1 ID=KJC3_011296-T1|Name=KJC3_011296-T1|organism=Aspergillus niger KJC3|type=CDS|length=1596bp|location=Sequence derived from alignment at ch8:238573..240472+ (Aspergillus niger KJC3)
ATGCTGGTCTACCTTACCAACTTCTTCATAGCATGGCTCGCCTACTTTTG
GCAGCCGAAGCAACAACCCTGCGGTAGTTTAACCCTGCCACATATCCCCG
GGGTTGACATCATATCCATGACGCGCCAAGAGGTCCATAACTACAGCGTA
GCAACCTCCCCGCCATACAATCTCGCAGACGTACACAATCTTGACTTCTG
CAACGTATCCGTCACTCTGACTCACCCTGGTGAAGATGACACCGTCTCCG
TCTCCGTCTGGCTCCCCCTAAACAACTGGAACGGCCGTTTCCAGGCTACT
GGTGGCGGCGGCCTCGCAGCCGGTATCATTGGCTTAGCACCAGCTCACCC
AGTCAGCCAGGGCTACGCAACAGCTGCTACCGATGGCGGACTAACCTTGA
ATGGAACCAGTAATCCCCAGACGGGGGCCTGGATTCTGCGCCCCGACGGT
TCCATCAACACTGCTCTGCTACTGAACTTTGCCCATCGCTCGATCTATGA
CATGACTATCATCGGGAAGACTCTCGCCGAGCGCTTCTACGGATCCCCGC
CAAGATACTCCTACTGGAGCGGCTGCTCTACCGGCGGCAGGCAGGGATAC
TTTGCTGCAGCAAAGTATCCGAATCTCTTCGATGGAGTTCTAGCCGGTGC
ACCGGCCCTCAATTTCCCACGTTTGATCGGGTATATGTTCTGGCCGCCGG
TGCATATGTTCCATTCCGCCGCGCCACCACAGTGCGTCTTTGACACCTTT
TGGAAAGCAATTATAGACGAATGCGATCCACTTGATGGAGCCACGGACGG
GTTGATATCGGATTACAATCCACAGAGCTGCCCATTCAATCCCGAAACAC
TTGTTGGGCACACGGTAACCTGTCCGGAGATGGGCTCAGATTCCCCAGTG
ACCATCACAGCCCAGCACGCCACCCTCGTCAAGCAAATCCTGCAGGGCCC
TGATCTACAAGATCACCCCGACCTCTGGACAGGCCTTCCACCGGGCGCCT
CATTCCGCGGAACGGCAAACACTCAAGTAATCAACGGATCCATCGTCAGG
CCCGTCCCCTTCTTCCCCATCATCGGCTGGATTAAGAACTTCGTTTATCG
GGACCCGGACTACAACGTATTCGACATGACCTTCGACGACTTCAACACCG
CCTACCGCCTCACGCTGGACGGTTACAATGGCATTCTCGGATCGGATGAT
CTGAATCTCTCTGAGTTTCGTCGTGCAGGGGGGAAGCTATTGACCTGGCA
CGGGTTGGCGGATGAGTTAATTCCAGCGTCATGGACGAACGCATTCTGGG
AGGGGATTGATAAGACGGACGGTGCGGATGTGGATGAGTTCTATCGGGTT
TTCCTTGCCCCTGGCCTGGGTCACTGCTCGGCTGGGCATGGACCGAAACC
CGTTGATCTGTTGGGCGCATTGGTGCGCTGGGTGGAGGAAGGGATTGCGC
CTGATAGGTTGAGTGCGGCGGCTGTCAAGGCGGATGGGAAGGAGGTGACG
AGGGAGTTGTGTCGGTATCCGGCGACGCTGGTGTACGATGGGCATGGGGA
TGTGAATGATGCGGGGAGTTTTTCGTGTAGGCCTCGGGAGGGGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011296KJC3_011296Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011296-T1.utr5p1KJC3_011296-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011296-T1.exon1KJC3_011296-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011296-T1.cdsKJC3_011296-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011296-T1.utr3p1KJC3_011296-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011296-T1KJC3_011296-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-16)
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR011118
DBxrefPFAM:PF07519
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:238573..240472 +