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KJC3_011300-T1, KJC3_011300-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011300-T1
Unique NameKJC3_011300-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:245719..247668-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011300-T1 ID=KJC3_011300-T1|Name=KJC3_011300-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1950bp|location=Sequence derived from alignment at ch8:245719..247668- (Aspergillus niger KJC3)
GTGGTTTTTTGCCTGCAGGATCCTGCATGTAACCTCCCATCCCGGCATTC
CTTTCCCTGACTGTGTCTTGTTCTTTCATTATTTTCCCGCAATTTTCCCC
CTTGTCTCTTTTCTTTTCTTTTGCTTCTGGTCCCTTGTCGACAGATCTAT
AGATTCAACATGGAGGAGAAGCTGCCGGGCGCCTTTTCTCAGGCTCTGCC
TGTGGATCGCACCGACGATGCTGTGGAATACCTCCAGGGCCATGCGGCCG
CCGACAGCCCTCAGATCGACCTACGGGCATTGCGTCGGAAGATCGACTGG
CATCTGATACCCTTTATGTTCTCGTGCTATGTCCTGCAATTCTTGGACAA
GGTCATGCTCAACGTAAGTCGTCGCAAGCCTCCTGCCAACACACCCCTCA
TTGACGCAAGGGGGGACATAGTATGCTGCCGTCATGGGGATGAAAACGGA
ACTTCACCTCGCGGGGAACGAGTACACCAACACCGCAACGTGGTTCTTCC
TGGCCTATTTGATCGCTGAAGCTCCCAATAGTATGTTCGTTTGCCTCAAC
AAACATGAATAGTGCGCTGACGCCTTTCTCTCATCAGTCTACTGTCTGCA
GAAAGTCCCCGCCGCCAAGTGGCTCGGTGTAAATGTCGCTCTTTGGGGAG
TTGCCGCTGCAGCCTCCGCAGGAGCCAAAAACTATGCGACCCTCCTGACG
GCCCGTGTCTTCCTGGGTATCTTCGAAGCCACGATTGGCCCGTCGCTGAT
GCTGATCAGCAGTCAGTACTATACAAAAAGCGAGCAGGCACCTCGCTTCA
CCCTCTGGTATAATGGTTTGGGAGTGGCCCAGATCATTGGTGGCCTGGTA
TCCTTTGGGTTCCAGCATGTTCACCATGGAGCCACCCTGGCCGGGTGGCG
CATCATGTTCCTAGTCATTGGCTTGGTCACGGTACTGATTGGTGTACTCA
CTCTGCTCTTCATTCCTGACACCCCGATGAAGGCCAAGTGGCTGTCCGAG
GAAGAAAAGGTGGCTCTCCTGCAGCACGTCAGTGTCAACCAGACGGGAGT
GTGGAGCAGCGCCATCAACCTTAAGCAGATCTGGGAAGGCGTGCTTGACA
TCCAACTCTGGCTATTGGTCTTGATCACCATCCTCGTAAGATGAGTCCCT
GTCCATCACACACCTCACTTCCAAGCTAACCCCGTGCCAGATCTCTGTTT
CTAGCGGTGTTGTAACCACCTACTCCGCCACTCTCATCGCCGGGTTTGGA
TACTCCGGCCCCATCTCCGCCCTTCTCAACATGCCCTCCGGAATTGTCAG
TATCTTCTTCACCCTCCTCGTCGGCTTTGGTATCCGCAGAACCTCGCACC
GCTGGGCCTGGAACGCCTTCTGCACTATTCCCGGCATTATCGGCGGTGGC
CTTCTCTCCTTCCTCCCTAAGAGCAACAAAGCCGGTGTCCTCATCGGTAT
TTACCTGGTCAATGCCATTGTTGCCACCCTCCCCATCCTGTATCAGTGGA
CCATGGCCAACTGTGCCGGTCACACCAAGCGCGCTTTCAGCAGTGCACTG
ATCGCCGGCTCCTTCTCGGTCGGGAACATCATCGGGCCCCAGACCTTCCA
GGCCCGTGATGCCCCTGAATATCGTCCCGCGAAGATTGCGGTGCTGGCCA
CGCAGGCAGCGGCAGCCGTCATGTCTGTCGTGCTGTTCGCATATTATGTG
TGGGAGAACCGGAGACGGGATCGCCGGTATGGCAAGGTGGAGGATTCAAT
GGTGGATGAAGCCAAGTGGGCTGGGCTGACAGACAAAGAAAACACGAGGT
TTCGGTATGTGTATTAATGAAGAGGAAAATGTGATCTTTTTCAATTATTG
TATAGCAGCCAGCAAAGGGCTCTTATCAGGCCTCAGTTGTCTGGTTTGTG
CATGTCCTGACTTTGTGAATGGACGAATATAGCATTATATTCCATCTTTC
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Coding sequence (CDS) from alignment at ch8:245719..247668-

>KJC3_011300-T1 ID=KJC3_011300-T1|Name=KJC3_011300-T1|organism=Aspergillus niger KJC3|type=CDS|length=5952bp|location=Sequence derived from alignment at ch8:245719..247668- (Aspergillus niger KJC3)
ATCTCTGTTTCTAGCGGTGTTGTAACCACCTACTCCGCCACTCTCATCGC
CGGGTTTGGATACTCCGGCCCCATCTCCGCCCTTCTCAACATGCCCTCCG
GAATTGTCAGTATCTTCTTCACCCTCCTCGTCGGCTTTGGTATCCGCAGA
ACCTCGCACCGCTGGGCCTGGAACGCCTTCTGCACTATTCCCGGCATTAT
CGGCGGTGGCCTTCTCTCCTTCCTCCCTAAGAGCAACAAAGCCGGTGTCC
TCATCGGTATTTACCTGGTCAATGCCATTGTTGCCACCCTCCCCATCCTG
TATCAGTGGACCATGGCCAACTGTGCCGGTCACACCAAGCGCGCTTTCAG
CAGTGCACTGATCGCCGGCTCCTTCTCGGTCGGGAACATCATCGGGCCCC
AGACCTTCCAGGCCCGTGATGCCCCTGAATATCGTCCCGCGAAGATTGCG
GTGCTGGCCACGCAGGCAGCGGCAGCCGTCATGTCTGTCGTGCTGTTCGC
ATATTATGTGTGGGAGAACCGGAGACGGGATCGCCGGTATGGCAAGGTGG
AGGATTCAATGGTGGATGAAGCCAAGTGGGCTGGGCTGACAGACAAAGAA
AACACGAGGTTTCGGTATGTGTATTAATCTACTGTCTGCAGAAAGTCCCC
GCCGCCAAGTGGCTCGGTGTAAATGTCGCTCTTTGGGGAGTTGCCGCTGC
AGCCTCCGCAGGAGCCAAAAACTATGCGACCCTCCTGACGGCCCGTGTCT
TCCTGGGTATCTTCGAAGCCACGATTGGCCCGTCGCTGATGCTGATCAGC
AGTCAGTACTATACAAAAAGCGAGCAGGCACCTCGCTTCACCCTCTGGTA
TAATGGTTTGGGAGTGGCCCAGATCATTGGTGGCCTGGTATCCTTTGGGT
TCCAGCATGTTCACCATGGAGCCACCCTGGCCGGGTGGCGCATCATGTTC
CTAGTCATTGGCTTGGTCACGGTACTGATTGGTGTACTCACTCTGCTCTT
CATTCCTGACACCCCGATGAAGGCCAAGTGGCTGTCCGAGGAAGAAAAGG
TGGCTCTCCTGCAGCACGTCAGTGTCAACCAGACGGGAGTGTGGAGCAGC
GCCATCAACCTTAAGCAGATCTGGGAAGGCGTGCTTGACATCCAACTCTG
GCTATTGGTCTTGATCACCATCCTCTATGCTGCCGTCATGGGGATGAAAA
CGGAACTTCACCTCGCGGGGAACGAGTACACCAACACCGCAACGTGGTTC
TTCCTGGCCTATTTGATCGCTGAAGCTCCCAATAATGGAGGAGAAGCTGC
CGGGCGCCTTTTCTCAGGCTCTGCCTGTGGATCGCACCGACGATGCTGTG
GAATACCTCCAGGGCCATGCGGCCGCCGACAGCCCTCAGATCGACCTACG
GGCATTGCGTCGGAAGATCGACTGGCATCTGATACCCTTTATGTTCTCGT
GCTATGTCCTGCAATTCTTGGACAAGGTCATGCTCAACATCTCTGTTTCT
AGCGGTGTTGTAACCACCTACTCCGCCACTCTCATCGCCGGGTTTGGATA
CTCCGGCCCCATCTCCGCCCTTCTCAACATGCCCTCCGGAATTGTCAGTA
TCTTCTTCACCCTCCTCGTCGGCTTTGGTATCCGCAGAACCTCGCACCGC
TGGGCCTGGAACGCCTTCTGCACTATTCCCGGCATTATCGGCGGTGGCCT
TCTCTCCTTCCTCCCTAAGAGCAACAAAGCCGGTGTCCTCATCGGTATTT
ACCTGGTCAATGCCATTGTTGCCACCCTCCCCATCCTGTATCAGTGGACC
ATGGCCAACTGTGCCGGTCACACCAAGCGCGCTTTCAGCAGTGCACTGAT
CGCCGGCTCCTTCTCGGTCGGGAACATCATCGGGCCCCAGACCTTCCAGG
CCCGTGATGCCCCTGAATATCGTCCCGCGAAGATTGCGGTGCTGGCCACG
CAGGCAGCGGCAGCCGTCATGTCTGTCGTGCTGTTCGCATATTATGTGTG
GGAGAACCGGAGACGGGATCGCCGGTATGGCAAGGTGGAGGATTCAATGG
TGGATGAAGCCAAGTGGGCTGGGCTGACAGACAAAGAAAACACGAGGTTT
CGGTATGTGTATTAATCTACTGTCTGCAGAAAGTCCCCGCCGCCAAGTGG
CTCGGTGTAAATGTCGCTCTTTGGGGAGTTGCCGCTGCAGCCTCCGCAGG
AGCCAAAAACTATGCGACCCTCCTGACGGCCCGTGTCTTCCTGGGTATCT
TCGAAGCCACGATTGGCCCGTCGCTGATGCTGATCAGCAGTCAGTACTAT
ACAAAAAGCGAGCAGGCACCTCGCTTCACCCTCTGGTATAATGGTTTGGG
AGTGGCCCAGATCATTGGTGGCCTGGTATCCTTTGGGTTCCAGCATGTTC
ACCATGGAGCCACCCTGGCCGGGTGGCGCATCATGTTCCTAGTCATTGGC
TTGGTCACGGTACTGATTGGTGTACTCACTCTGCTCTTCATTCCTGACAC
CCCGATGAAGGCCAAGTGGCTGTCCGAGGAAGAAAAGGTGGCTCTCCTGC
AGCACGTCAGTGTCAACCAGACGGGAGTGTGGAGCAGCGCCATCAACCTT
AAGCAGATCTGGGAAGGCGTGCTTGACATCCAACTCTGGCTATTGGTCTT
GATCACCATCCTCTATGCTGCCGTCATGGGGATGAAAACGGAACTTCACC
TCGCGGGGAACGAGTACACCAACACCGCAACGTGGTTCTTCCTGGCCTAT
TTGATCGCTGAAGCTCCCAATAATGGAGGAGAAGCTGCCGGGCGCCTTTT
CTCAGGCTCTGCCTGTGGATCGCACCGACGATGCTGTGGAATACCTCCAG
GGCCATGCGGCCGCCGACAGCCCTCAGATCGACCTACGGGCATTGCGTCG
GAAGATCGACTGGCATCTGATACCCTTTATGTTCTCGTGCTATGTCCTGC
AATTCTTGGACAAGGTCATGCTCAACATCTCTGTTTCTAGCGGTGTTGTA
ACCACCTACTCCGCCACTCTCATCGCCGGGTTTGGATACTCCGGCCCCAT
CTCCGCCCTTCTCAACATGCCCTCCGGAATTGTCAGTATCTTCTTCACCC
TCCTCGTCGGCTTTGGTATCCGCAGAACCTCGCACCGCTGGGCCTGGAAC
GCCTTCTGCACTATTCCCGGCATTATCGGCGGTGGCCTTCTCTCCTTCCT
CCCTAAGAGCAACAAAGCCGGTGTCCTCATCGGTATTTACCTGGTCAATG
CCATTGTTGCCACCCTCCCCATCCTGTATCAGTGGACCATGGCCAACTGT
GCCGGTCACACCAAGCGCGCTTTCAGCAGTGCACTGATCGCCGGCTCCTT
CTCGGTCGGGAACATCATCGGGCCCCAGACCTTCCAGGCCCGTGATGCCC
CTGAATATCGTCCCGCGAAGATTGCGGTGCTGGCCACGCAGGCAGCGGCA
GCCGTCATGTCTGTCGTGCTGTTCGCATATTATGTGTGGGAGAACCGGAG
ACGGGATCGCCGGTATGGCAAGGTGGAGGATTCAATGGTGGATGAAGCCA
AGTGGGCTGGGCTGACAGACAAAGAAAACACGAGGTTTCGGTATGTGTAT
TAATCTACTGTCTGCAGAAAGTCCCCGCCGCCAAGTGGCTCGGTGTAAAT
GTCGCTCTTTGGGGAGTTGCCGCTGCAGCCTCCGCAGGAGCCAAAAACTA
TGCGACCCTCCTGACGGCCCGTGTCTTCCTGGGTATCTTCGAAGCCACGA
TTGGCCCGTCGCTGATGCTGATCAGCAGTCAGTACTATACAAAAAGCGAG
CAGGCACCTCGCTTCACCCTCTGGTATAATGGTTTGGGAGTGGCCCAGAT
CATTGGTGGCCTGGTATCCTTTGGGTTCCAGCATGTTCACCATGGAGCCA
CCCTGGCCGGGTGGCGCATCATGTTCCTAGTCATTGGCTTGGTCACGGTA
CTGATTGGTGTACTCACTCTGCTCTTCATTCCTGACACCCCGATGAAGGC
CAAGTGGCTGTCCGAGGAAGAAAAGGTGGCTCTCCTGCAGCACGTCAGTG
TCAACCAGACGGGAGTGTGGAGCAGCGCCATCAACCTTAAGCAGATCTGG
GAAGGCGTGCTTGACATCCAACTCTGGCTATTGGTCTTGATCACCATCCT
CTATGCTGCCGTCATGGGGATGAAAACGGAACTTCACCTCGCGGGGAACG
AGTACACCAACACCGCAACGTGGTTCTTCCTGGCCTATTTGATCGCTGAA
GCTCCCAATAATGGAGGAGAAGCTGCCGGGCGCCTTTTCTCAGGCTCTGC
CTGTGGATCGCACCGACGATGCTGTGGAATACCTCCAGGGCCATGCGGCC
GCCGACAGCCCTCAGATCGACCTACGGGCATTGCGTCGGAAGATCGACTG
GCATCTGATACCCTTTATGTTCTCGTGCTATGTCCTGCAATTCTTGGACA
AGGTCATGCTCAACATCTCTGTTTCTAGCGGTGTTGTAACCACCTACTCC
GCCACTCTCATCGCCGGGTTTGGATACTCCGGCCCCATCTCCGCCCTTCT
CAACATGCCCTCCGGAATTGTCAGTATCTTCTTCACCCTCCTCGTCGGCT
TTGGTATCCGCAGAACCTCGCACCGCTGGGCCTGGAACGCCTTCTGCACT
ATTCCCGGCATTATCGGCGGTGGCCTTCTCTCCTTCCTCCCTAAGAGCAA
CAAAGCCGGTGTCCTCATCGGTATTTACCTGGTCAATGCCATTGTTGCCA
CCCTCCCCATCCTGTATCAGTGGACCATGGCCAACTGTGCCGGTCACACC
AAGCGCGCTTTCAGCAGTGCACTGATCGCCGGCTCCTTCTCGGTCGGGAA
CATCATCGGGCCCCAGACCTTCCAGGCCCGTGATGCCCCTGAATATCGTC
CCGCGAAGATTGCGGTGCTGGCCACGCAGGCAGCGGCAGCCGTCATGTCT
GTCGTGCTGTTCGCATATTATGTGTGGGAGAACCGGAGACGGGATCGCCG
GTATGGCAAGGTGGAGGATTCAATGGTGGATGAAGCCAAGTGGGCTGGGC
TGACAGACAAAGAAAACACGAGGTTTCGGTATGTGTATTAATCTACTGTC
TGCAGAAAGTCCCCGCCGCCAAGTGGCTCGGTGTAAATGTCGCTCTTTGG
GGAGTTGCCGCTGCAGCCTCCGCAGGAGCCAAAAACTATGCGACCCTCCT
GACGGCCCGTGTCTTCCTGGGTATCTTCGAAGCCACGATTGGCCCGTCGC
TGATGCTGATCAGCAGTCAGTACTATACAAAAAGCGAGCAGGCACCTCGC
TTCACCCTCTGGTATAATGGTTTGGGAGTGGCCCAGATCATTGGTGGCCT
GGTATCCTTTGGGTTCCAGCATGTTCACCATGGAGCCACCCTGGCCGGGT
GGCGCATCATGTTCCTAGTCATTGGCTTGGTCACGGTACTGATTGGTGTA
CTCACTCTGCTCTTCATTCCTGACACCCCGATGAAGGCCAAGTGGCTGTC
CGAGGAAGAAAAGGTGGCTCTCCTGCAGCACGTCAGTGTCAACCAGACGG
GAGTGTGGAGCAGCGCCATCAACCTTAAGCAGATCTGGGAAGGCGTGCTT
GACATCCAACTCTGGCTATTGGTCTTGATCACCATCCTCTATGCTGCCGT
CATGGGGATGAAAACGGAACTTCACCTCGCGGGGAACGAGTACACCAACA
CCGCAACGTGGTTCTTCCTGGCCTATTTGATCGCTGAAGCTCCCAATAAT
GGAGGAGAAGCTGCCGGGCGCCTTTTCTCAGGCTCTGCCTGTGGATCGCA
CCGACGATGCTGTGGAATACCTCCAGGGCCATGCGGCCGCCGACAGCCCT
CAGATCGACCTACGGGCATTGCGTCGGAAGATCGACTGGCATCTGATACC
CTTTATGTTCTCGTGCTATGTCCTGCAATTCTTGGACAAGGTCATGCTCA
AC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011300KJC3_011300Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011300-T1KJC3_011300-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011300-T1.cdsKJC3_011300-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011300-T1.utr3p1KJC3_011300-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011300-T1.exon4KJC3_011300-T1.exon4Aspergillus niger KJC3exon
KJC3_011300-T1.exon3KJC3_011300-T1.exon3Aspergillus niger KJC3exon
KJC3_011300-T1.exon2KJC3_011300-T1.exon2Aspergillus niger KJC3exon
KJC3_011300-T1.exon1KJC3_011300-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011300-T1.utr5p1KJC3_011300-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:245719..247668 -
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