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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:247900..249638+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011301-T2 ID=KJC3_011301-T2|Name=KJC3_011301-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1739bp|location=Sequence derived from alignment at ch8:247900..249638+ (Aspergillus niger KJC3)
CTTGGCCTGACCGAAGTTAATTGCTGAAGGATTCTGAATCCGAATCATGT
TCCAGCTCTGAGGACCAAATTTGCCCCTTGTTGTAGGGCTTCAGCATGAT
CCTGCGAAGCCCAGGATCGAAAAATCCCTTCAACCAGCGCACAGCACGAC
TTGCATAATCACTACGCAAATATCCCTTCTCCCTCATGTCTCTCCCCTCT
TTCTCCTTGACCTTCTACATTTACTGCCAGTATGGGCTGGGTGCACCATG
CCTCGCCTGAAGTGGAAGCGGAGTCGCAATATCGCCTCATTCTAGGGGTG
TGCCTGGGCTTGACCCTGTTGATGATTATCACAGTCTGCCTGCGTTTAGC
AATCCGATTCAACGCCCGCCGATTGGAAGCGTCCGATTTTGTGATGCTGG
TGACTATGGTGGGTTACCTTCGGTGGATAGACGATCCGACCGCTAATCGG
TGCCAGATCTTCAGCATCATATACAGCGCATTGTGCGTCGCTCGTGAGTC
GACCAAGCCTTGAGTCCAGTCTAAGCGCTCACTTTCAACAGAGAGCAGGT
ACGGCCTCGGATTACCCTTGTCGCTGCGCCCCAAGGCAGACCTTCCGGAT
TACACAAAGGTATGCGCTGTGCCTGAATTTCAGTCAAGACGAAGTATTTA
TAAAAACACCAACAGCTCAATTATGCCGGTCGCCCATTCTACCAACTTGG
AATCGCAGGATTCAAAGCTTCCCTATGCCTCAATTATTTGCGATTGATTT
CCGGAACATCCAAGAATTTCTACCGAATCCTTATATGGGCCGTGATAGCT
GTCTCGACACTTGGCCATCTTGCGGGAACATTAGTTCTGATATTCGACTG
CCAGCCGGTGAGAGAGTGAAATATTTTCCAGTCGCAGGGCAAGCTGGCTG
ATATGACGATCGAAAGGTTGAGCGCGCCTGGAACCCCAACATCTCAGGGT
CGTGTCTTCCAGCAGGGCCAACATTCTATGGATTAGCCATCTTCACCATT
ATCTGCGACATCACCATCATCATCCTTCCCATTCCGCTGTTGCTTCAACT
GAATATCAAGACCGCACAGAAAGCGGGAGTAGTTTGTCTGTTCCTGCTGG
GGCTGTTCACCACGATCTGCTCTATCCTTCGCCTCACGCAAATCCATCGG
GTGGCATATGGCGATGGAAATTCGACCATGTTGGTGCTGTGGGGCACAAT
TGAGTTCAATGTCGGGGTAGGTTTCCACGAGCACGCGAAATAGGATTATG
CACCGAGTCACTGACTAATTGTATTAGAACATTGTAACTTGTGTCCCCTT
CCTCGCTCCTTTGCTGAAAGGTGCAGTGCGCGATTTCCGATCGTACAGTG
GCCGGAAAGGGTACGATAGCCGGAGCTATGCTTTGCAGACCTGGTCCAAA
GACCCGCGCTCGCAGTTACGGTCGACAACTTCGGCGGCGCCGCAACCCAA
ACGCACGCCCAGCGAAGAGCTTATCCTCGAGAGTGGGGGCGTCGACGAGG
GAGGCATTCATATGACGGTGGAGCTGCGCGTGTCGCTAGAGAAGAGGCCA
ACGACAGAGGTCAGAGAGTGATGCCAGTACTCTTGCCAACGACTGATGGC
GCCATTCCTTAGAACTAATCTCTTAGACTTTCGTTATGTATATTAATCAC
TCACTGGGTCTTCCTTTTTCTTCTCGTCCTATTGTGAGCCACTTTCCGGC
GATTTCTGAAATAGTGCAATGCAGGAATCTTATTAGGTG back to topCoding sequence (CDS) from alignment at ch8:247900..249638+ >KJC3_011301-T2 ID=KJC3_011301-T2|Name=KJC3_011301-T2|organism=Aspergillus niger KJC3|type=CDS|length=4005bp|location=Sequence derived from alignment at ch8:247900..249638+ (Aspergillus niger KJC3)
ATGGGCTGGGTGCACCATGCCTCGCCTGAAGTGGAAGCGGAGTCGCAATA
TCGCCTCATTCTAGGGGTGTGCCTGGGCTTGACCCTGTTGATGATTATCA
CAGTCTGCCTGCGTTTAGCAATCCGATTCAACGCCCGCCGATTGGAAGCG
TCCGATTTTGTGATGCTGGTGACTATGATCTTCAGCATCATATACAGCGC
ATTGTGCGTCGCTCAGAGCAGGTACGGCCTCGGATTACCCTTGTCGCTGC
GCCCCAAGGCAGACCTTCCGGATTACACAAAGCTCAATTATGCCGGTCGC
CCATTCTACCAACTTGGAATCGCAGGATTCAAAGCTTCCCTATGCCTCAA
TTATTTGCGATTGATTTCCGGAACATCCAAGAATTTCTACCGAATCCTTA
TATGGGCCGTGATAGCTGTCTCGACACTTGGCCATCTTGCGGGAACATTA
GTTCTGATATTCGACTGCCAGCCGGTTGAGCGCGCCTGGAACCCCAACAT
CTCAGGGTCGTGTCTTCCAGCAGGGCCAACATTCTATGGATTAGCCATCT
TCACCATTATCTGCGACATCACCATCATCATCCTTCCCATTCCGCTGTTG
CTTCAACTGAATATCAAGACCGCACAGAAAGCGGGAGTAGTTTGTCTGTT
CCTGCTGGGGCTGTTCACCACGATCTGCTCTATCCTTCGCCTCACGCAAA
TCCATCGGGTGGCATATGGCGATGGAAATTCGACCATGTTGGTGCTGTGG
GGCACAATTGAGTTCAATGTCGGGGTAGGTTTCCACGAGCACGCGAAATA
GATGGGCTGGGTGCACCATGCCTCGCCTGAAGTGGAAGCGGAGTCGCAAT
ATCGCCTCATTCTAGGGGTGTGCCTGGGCTTGACCCTGTTGATGATTATC
ACAGTCTGCCTGCGTTTAGCAATCCGATTCAACGCCCGCCGATTGGAAGC
GTCCGATTTTGTGATGCTGGTGACTATGATCTTCAGCATCATATACAGCG
CATTGTGCGTCGCTCAGAGCAGGTACGGCCTCGGATTACCCTTGTCGCTG
CGCCCCAAGGCAGACCTTCCGGATTACACAAAGCTCAATTATGCCGGTCG
CCCATTCTACCAACTTGGAATCGCAGGATTCAAAGCTTCCCTATGCCTCA
ATTATTTGCGATTGATTTCCGGAACATCCAAGAATTTCTACCGAATCCTT
ATATGGGCCGTGATAGCTGTCTCGACACTTGGCCATCTTGCGGGAACATT
AGTTCTGATATTCGACTGCCAGCCGGTTGAGCGCGCCTGGAACCCCAACA
TCTCAGGGTCGTGTCTTCCAGCAGGGCCAACATTCTATGGATTAGCCATC
TTCACCATTATCTGCGACATCACCATCATCATCCTTCCCATTCCGCTGTT
GCTTCAACTGAATATCAAGACCGCACAGAAAGCGGGAGTAGTTTGTCTGT
TCCTGCTGGGGCTGTTCACCACGATCTGCTCTATCCTTCGCCTCACGCAA
ATCCATCGGGTGGCATATGGCGATGGAAATTCGACCATGTTGGTGCTGTG
GGGCACAATTGAGTTCAATGTCGGGGTAGGTTTCCACGAGCACGCGAAAT
AGATGGGCTGGGTGCACCATGCCTCGCCTGAAGTGGAAGCGGAGTCGCAA
TATCGCCTCATTCTAGGGGTGTGCCTGGGCTTGACCCTGTTGATGATTAT
CACAGTCTGCCTGCGTTTAGCAATCCGATTCAACGCCCGCCGATTGGAAG
CGTCCGATTTTGTGATGCTGGTGACTATGATCTTCAGCATCATATACAGC
GCATTGTGCGTCGCTCAGAGCAGGTACGGCCTCGGATTACCCTTGTCGCT
GCGCCCCAAGGCAGACCTTCCGGATTACACAAAGCTCAATTATGCCGGTC
GCCCATTCTACCAACTTGGAATCGCAGGATTCAAAGCTTCCCTATGCCTC
AATTATTTGCGATTGATTTCCGGAACATCCAAGAATTTCTACCGAATCCT
TATATGGGCCGTGATAGCTGTCTCGACACTTGGCCATCTTGCGGGAACAT
TAGTTCTGATATTCGACTGCCAGCCGGTTGAGCGCGCCTGGAACCCCAAC
ATCTCAGGGTCGTGTCTTCCAGCAGGGCCAACATTCTATGGATTAGCCAT
CTTCACCATTATCTGCGACATCACCATCATCATCCTTCCCATTCCGCTGT
TGCTTCAACTGAATATCAAGACCGCACAGAAAGCGGGAGTAGTTTGTCTG
TTCCTGCTGGGGCTGTTCACCACGATCTGCTCTATCCTTCGCCTCACGCA
AATCCATCGGGTGGCATATGGCGATGGAAATTCGACCATGTTGGTGCTGT
GGGGCACAATTGAGTTCAATGTCGGGGTAGGTTTCCACGAGCACGCGAAA
TAGATGGGCTGGGTGCACCATGCCTCGCCTGAAGTGGAAGCGGAGTCGCA
ATATCGCCTCATTCTAGGGGTGTGCCTGGGCTTGACCCTGTTGATGATTA
TCACAGTCTGCCTGCGTTTAGCAATCCGATTCAACGCCCGCCGATTGGAA
GCGTCCGATTTTGTGATGCTGGTGACTATGATCTTCAGCATCATATACAG
CGCATTGTGCGTCGCTCAGAGCAGGTACGGCCTCGGATTACCCTTGTCGC
TGCGCCCCAAGGCAGACCTTCCGGATTACACAAAGCTCAATTATGCCGGT
CGCCCATTCTACCAACTTGGAATCGCAGGATTCAAAGCTTCCCTATGCCT
CAATTATTTGCGATTGATTTCCGGAACATCCAAGAATTTCTACCGAATCC
TTATATGGGCCGTGATAGCTGTCTCGACACTTGGCCATCTTGCGGGAACA
TTAGTTCTGATATTCGACTGCCAGCCGGTTGAGCGCGCCTGGAACCCCAA
CATCTCAGGGTCGTGTCTTCCAGCAGGGCCAACATTCTATGGATTAGCCA
TCTTCACCATTATCTGCGACATCACCATCATCATCCTTCCCATTCCGCTG
TTGCTTCAACTGAATATCAAGACCGCACAGAAAGCGGGAGTAGTTTGTCT
GTTCCTGCTGGGGCTGTTCACCACGATCTGCTCTATCCTTCGCCTCACGC
AAATCCATCGGGTGGCATATGGCGATGGAAATTCGACCATGTTGGTGCTG
TGGGGCACAATTGAGTTCAATGTCGGGGTAGGTTTCCACGAGCACGCGAA
ATAGATGGGCTGGGTGCACCATGCCTCGCCTGAAGTGGAAGCGGAGTCGC
AATATCGCCTCATTCTAGGGGTGTGCCTGGGCTTGACCCTGTTGATGATT
ATCACAGTCTGCCTGCGTTTAGCAATCCGATTCAACGCCCGCCGATTGGA
AGCGTCCGATTTTGTGATGCTGGTGACTATGATCTTCAGCATCATATACA
GCGCATTGTGCGTCGCTCAGAGCAGGTACGGCCTCGGATTACCCTTGTCG
CTGCGCCCCAAGGCAGACCTTCCGGATTACACAAAGCTCAATTATGCCGG
TCGCCCATTCTACCAACTTGGAATCGCAGGATTCAAAGCTTCCCTATGCC
TCAATTATTTGCGATTGATTTCCGGAACATCCAAGAATTTCTACCGAATC
CTTATATGGGCCGTGATAGCTGTCTCGACACTTGGCCATCTTGCGGGAAC
ATTAGTTCTGATATTCGACTGCCAGCCGGTTGAGCGCGCCTGGAACCCCA
ACATCTCAGGGTCGTGTCTTCCAGCAGGGCCAACATTCTATGGATTAGCC
ATCTTCACCATTATCTGCGACATCACCATCATCATCCTTCCCATTCCGCT
GTTGCTTCAACTGAATATCAAGACCGCACAGAAAGCGGGAGTAGTTTGTC
TGTTCCTGCTGGGGCTGTTCACCACGATCTGCTCTATCCTTCGCCTCACG
CAAATCCATCGGGTGGCATATGGCGATGGAAATTCGACCATGTTGGTGCT
GTGGGGCACAATTGAGTTCAATGTCGGGGTAGGTTTCCACGAGCACGCGA
AATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011301-T2.utr5p1 | KJC3_011301-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011301-T2.utr3p1 | KJC3_011301-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:247900..249638 + |
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