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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:250604..252342+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011302-T1 ID=KJC3_011302-T1|Name=KJC3_011302-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1739bp|location=Sequence derived from alignment at ch8:250604..252342+ (Aspergillus niger KJC3)
TTCTCATCCCATTGGCACATTCCCAATGATCATGGTTCCACCAATCCAAT
TCCTGCGCACCTGCCACACGTGTGACCGTCCGATTCCAGCCGGCACCCCG
TCCGGCCCTTGATTACAGCAGTATTACAGCGATGCGTCTTCAGGTAAAAG
GGTCAGGGGATGAACCCGTGTTCCCGTGGAACCGAACATCCGTGCCTCCT
CGCTGCCCACATCATGGATGATCTTCCCGTTCTCATCGTCGGCGCAGGCA
TCAGTGGCCTTCTTCTGGCCCAGCATCTCCAGAAGCTCGGTGTCCCTTAC
AAGATCTTCGAGCGCGATGCCGCCATCGACGCACGGAGCGGGGGTTGGGG
GTTGACGCTTCATTGGGCGCTCCCTGCACTGCGGGAACTCCTACCGGACC
ACCTCGTGCAACGCCTCCCAGAGGCATATGTCAACAAGGCGGCGGCTGCT
CGCGGTGACACCGGTCGCTTTTCGTTCTTTGACCTGAAAACCGGATCTGC
GTTGTACAGCGTTCCAGCTGCGGAGCGGATTCGGGTCAGTCGTGTTCGAT
TGAGGCAGCTGGTAGCCACGGGGCTCGATGTTCAGGTAAGTCTTTATCCA
CTACCTTGGTGAGATGGAATGGAATGAGTTCAAACCTTTCAGACCACTCT
GACCAGAATTGTAGTGGAACAAAACTCTCCAAAATATCGAGTCCACCGCC
GATACCGTCACCGCGCATTTCGCAGACGGAACCTCCTACACAGGATGCCT
CTTGATCGGCTGCGATGGATCGCGATCCCCCACCCGCGAGATCTTGTACC
CGGACAGCCATGAGATGAATCCACTACCGGTGCAGATCCTCGGCGCAGCT
ACTCTGTATACAGCAGAGGAGATGGCAGGGGCTGCAGAGATTGATCCATT
CATATTTCAGGGCTCGCACCCTGAATCTAACGTCTTTCTCTTCTTCAGCA
GTATGTATATATCCCCATTCTATCACAAGTCCCACATACACACGATGGCT
AACTTACTATCCTCTATCTTAGTACTCGATACCCCCAACAACTTCGTCGA
AAGCAGCAAAGACAAATATGAATGCCAGATCATACTATCATGGGCAGATT
CCAAGGATATCGCAGTCCCCAGCGACAACGGGGAGCGAATCGCCCTCATG
AAATCCTTGGCCTCGGACTGGGCGGAGCCATTCAGGACCCTGGTCCATCG
GTTATCTGAGGACACGGAGGCACGGTCAATCCGCATCGCGGACTGGATGT
TCCGACCGCTGCAAAATCGCTCGCACCCCAGGGTTGTGCTGATGGGTGAT
TCGGCGCATACAATGACTATGTGTATGTTCATATAATGCTGTGCTATATG
GGAATATACATGCTGACAGGGATAATTTAGACCGTGGAGAAGGGGCCAAT
AATGCCATCGTCGATGTACTGGATCTGACCCAACGTGTGGATATGCGTTC
GCTAGGGTGAGTCTATCAGCGGATGTACTACTGTGGTTGGAGACAACTAA
CTAATCGGTCCAAACAGAACCATGTCGACACAAGCGCTGCGAGATGCATT
GGACGCCTACGAGAACGACGTCTTCAGGCGCGCAGAGCCTAGTGTACTTA
ACTCGCGCCAGGCCTGTGTCGACGCTCATGACTTCACACGTATCCTAGAC
GAGAGCCCCCTCGTATCAGCCCGCGTGCTGAAGGAGGATACCACGGAGCA
ATAGTCTTAGCCAGAGAATCATCACAGTGTTGCGGGGAG back to topCoding sequence (CDS) from alignment at ch8:250604..252342+ >KJC3_011302-T1 ID=KJC3_011302-T1|Name=KJC3_011302-T1|organism=Aspergillus niger KJC3|type=CDS|length=6375bp|location=Sequence derived from alignment at ch8:250604..252342+ (Aspergillus niger KJC3)
ATGAACCCGTGTTCCCGTGGAACCGAACATCCGTGCCTCCTCGCTGCCCA
CATCATGGATGATCTTCCCGTTCTCATCGTCGGCGCAGGCATCAGTGGCC
TTCTTCTGGCCCAGCATCTCCAGAAGCTCGGTGTCCCTTACAAGATCTTC
GAGCGCGATGCCGCCATCGACGCACGGAGCGGGGGTTGGGGGTTGACGCT
TCATTGGGCGCTCCCTGCACTGCGGGAACTCCTACCGGACCACCTCGTGC
AACGCCTCCCAGAGGCATATGTCAACAAGGCGGCGGCTGCTCGCGGTGAC
ACCGGTCGCTTTTCGTTCTTTGACCTGAAAACCGGATCTGCGTTGTACAG
CGTTCCAGCTGCGGAGCGGATTCGGGTCAGTCGTGTTCGATTGAGGCAGC
TGGTAGCCACGGGGCTCGATGTTCAGTGGAACAAAACTCTCCAAAATATC
GAGTCCACCGCCGATACCGTCACCGCGCATTTCGCAGACGGAACCTCCTA
CACAGGATGCCTCTTGATCGGCTGCGATGGATCGCGATCCCCCACCCGCG
AGATCTTGTACCCGGACAGCCATGAGATGAATCCACTACCGGTGCAGATC
CTCGGCGCAGCTACTCTGTATACAGCAGAGGAGATGGCAGGGGCTGCAGA
GATTGATCCATTCATATTTCAGGGCTCGCACCCTGAATCTAACGTCTTTC
TCTTCTTCAGCATACTCGATACCCCCAACAACTTCGTCGAAAGCAGCAAA
GACAAATATGAATGCCAGATCATACTATCATGGGCAGATTCCAAGGATAT
CGCAGTCCCCAGCGACAACGGGGAGCGAATCGCCCTCATGAAATCCTTGG
CCTCGGACTGGGCGGAGCCATTCAGGACCCTGGTCCATCGGTTATCTGAG
GACACGGAGGCACGGTCAATCCGCATCGCGGACTGGATGTTCCGACCGCT
GCAAAATCGCTCGCACCCCAGGGTTGTGCTGATGGGTGATTCGGCGCATA
CAATGACTATGTACCGTGGAGAAGGGGCCAATAATGCCATCGTCGATGTA
CTGGATCTGACCCAACGTGTGGATATGCGTTCGCTAGGAACCATGTCGAC
ACAAGCGCTGCGAGATGCATTGGACGCCTACGAGAACGACGTCTTCAGGC
GCGCAGAGCCTAGTGTACTTAACTCGCGCCAGGCCTGTGTCGACGCTCAT
GACTTCACACGTATCCTAGACGAGAGCCCCCTCGTATCAGCCCGCGTGCT
GAAGGAGGATACCACGGAGCAATAGATGAACCCGTGTTCCCGTGGAACCG
AACATCCGTGCCTCCTCGCTGCCCACATCATGGATGATCTTCCCGTTCTC
ATCGTCGGCGCAGGCATCAGTGGCCTTCTTCTGGCCCAGCATCTCCAGAA
GCTCGGTGTCCCTTACAAGATCTTCGAGCGCGATGCCGCCATCGACGCAC
GGAGCGGGGGTTGGGGGTTGACGCTTCATTGGGCGCTCCCTGCACTGCGG
GAACTCCTACCGGACCACCTCGTGCAACGCCTCCCAGAGGCATATGTCAA
CAAGGCGGCGGCTGCTCGCGGTGACACCGGTCGCTTTTCGTTCTTTGACC
TGAAAACCGGATCTGCGTTGTACAGCGTTCCAGCTGCGGAGCGGATTCGG
GTCAGTCGTGTTCGATTGAGGCAGCTGGTAGCCACGGGGCTCGATGTTCA
GTGGAACAAAACTCTCCAAAATATCGAGTCCACCGCCGATACCGTCACCG
CGCATTTCGCAGACGGAACCTCCTACACAGGATGCCTCTTGATCGGCTGC
GATGGATCGCGATCCCCCACCCGCGAGATCTTGTACCCGGACAGCCATGA
GATGAATCCACTACCGGTGCAGATCCTCGGCGCAGCTACTCTGTATACAG
CAGAGGAGATGGCAGGGGCTGCAGAGATTGATCCATTCATATTTCAGGGC
TCGCACCCTGAATCTAACGTCTTTCTCTTCTTCAGCATACTCGATACCCC
CAACAACTTCGTCGAAAGCAGCAAAGACAAATATGAATGCCAGATCATAC
TATCATGGGCAGATTCCAAGGATATCGCAGTCCCCAGCGACAACGGGGAG
CGAATCGCCCTCATGAAATCCTTGGCCTCGGACTGGGCGGAGCCATTCAG
GACCCTGGTCCATCGGTTATCTGAGGACACGGAGGCACGGTCAATCCGCA
TCGCGGACTGGATGTTCCGACCGCTGCAAAATCGCTCGCACCCCAGGGTT
GTGCTGATGGGTGATTCGGCGCATACAATGACTATGTACCGTGGAGAAGG
GGCCAATAATGCCATCGTCGATGTACTGGATCTGACCCAACGTGTGGATA
TGCGTTCGCTAGGAACCATGTCGACACAAGCGCTGCGAGATGCATTGGAC
GCCTACGAGAACGACGTCTTCAGGCGCGCAGAGCCTAGTGTACTTAACTC
GCGCCAGGCCTGTGTCGACGCTCATGACTTCACACGTATCCTAGACGAGA
GCCCCCTCGTATCAGCCCGCGTGCTGAAGGAGGATACCACGGAGCAATAG
ATGAACCCGTGTTCCCGTGGAACCGAACATCCGTGCCTCCTCGCTGCCCA
CATCATGGATGATCTTCCCGTTCTCATCGTCGGCGCAGGCATCAGTGGCC
TTCTTCTGGCCCAGCATCTCCAGAAGCTCGGTGTCCCTTACAAGATCTTC
GAGCGCGATGCCGCCATCGACGCACGGAGCGGGGGTTGGGGGTTGACGCT
TCATTGGGCGCTCCCTGCACTGCGGGAACTCCTACCGGACCACCTCGTGC
AACGCCTCCCAGAGGCATATGTCAACAAGGCGGCGGCTGCTCGCGGTGAC
ACCGGTCGCTTTTCGTTCTTTGACCTGAAAACCGGATCTGCGTTGTACAG
CGTTCCAGCTGCGGAGCGGATTCGGGTCAGTCGTGTTCGATTGAGGCAGC
TGGTAGCCACGGGGCTCGATGTTCAGTGGAACAAAACTCTCCAAAATATC
GAGTCCACCGCCGATACCGTCACCGCGCATTTCGCAGACGGAACCTCCTA
CACAGGATGCCTCTTGATCGGCTGCGATGGATCGCGATCCCCCACCCGCG
AGATCTTGTACCCGGACAGCCATGAGATGAATCCACTACCGGTGCAGATC
CTCGGCGCAGCTACTCTGTATACAGCAGAGGAGATGGCAGGGGCTGCAGA
GATTGATCCATTCATATTTCAGGGCTCGCACCCTGAATCTAACGTCTTTC
TCTTCTTCAGCATACTCGATACCCCCAACAACTTCGTCGAAAGCAGCAAA
GACAAATATGAATGCCAGATCATACTATCATGGGCAGATTCCAAGGATAT
CGCAGTCCCCAGCGACAACGGGGAGCGAATCGCCCTCATGAAATCCTTGG
CCTCGGACTGGGCGGAGCCATTCAGGACCCTGGTCCATCGGTTATCTGAG
GACACGGAGGCACGGTCAATCCGCATCGCGGACTGGATGTTCCGACCGCT
GCAAAATCGCTCGCACCCCAGGGTTGTGCTGATGGGTGATTCGGCGCATA
CAATGACTATGTACCGTGGAGAAGGGGCCAATAATGCCATCGTCGATGTA
CTGGATCTGACCCAACGTGTGGATATGCGTTCGCTAGGAACCATGTCGAC
ACAAGCGCTGCGAGATGCATTGGACGCCTACGAGAACGACGTCTTCAGGC
GCGCAGAGCCTAGTGTACTTAACTCGCGCCAGGCCTGTGTCGACGCTCAT
GACTTCACACGTATCCTAGACGAGAGCCCCCTCGTATCAGCCCGCGTGCT
GAAGGAGGATACCACGGAGCAATAGATGAACCCGTGTTCCCGTGGAACCG
AACATCCGTGCCTCCTCGCTGCCCACATCATGGATGATCTTCCCGTTCTC
ATCGTCGGCGCAGGCATCAGTGGCCTTCTTCTGGCCCAGCATCTCCAGAA
GCTCGGTGTCCCTTACAAGATCTTCGAGCGCGATGCCGCCATCGACGCAC
GGAGCGGGGGTTGGGGGTTGACGCTTCATTGGGCGCTCCCTGCACTGCGG
GAACTCCTACCGGACCACCTCGTGCAACGCCTCCCAGAGGCATATGTCAA
CAAGGCGGCGGCTGCTCGCGGTGACACCGGTCGCTTTTCGTTCTTTGACC
TGAAAACCGGATCTGCGTTGTACAGCGTTCCAGCTGCGGAGCGGATTCGG
GTCAGTCGTGTTCGATTGAGGCAGCTGGTAGCCACGGGGCTCGATGTTCA
GTGGAACAAAACTCTCCAAAATATCGAGTCCACCGCCGATACCGTCACCG
CGCATTTCGCAGACGGAACCTCCTACACAGGATGCCTCTTGATCGGCTGC
GATGGATCGCGATCCCCCACCCGCGAGATCTTGTACCCGGACAGCCATGA
GATGAATCCACTACCGGTGCAGATCCTCGGCGCAGCTACTCTGTATACAG
CAGAGGAGATGGCAGGGGCTGCAGAGATTGATCCATTCATATTTCAGGGC
TCGCACCCTGAATCTAACGTCTTTCTCTTCTTCAGCATACTCGATACCCC
CAACAACTTCGTCGAAAGCAGCAAAGACAAATATGAATGCCAGATCATAC
TATCATGGGCAGATTCCAAGGATATCGCAGTCCCCAGCGACAACGGGGAG
CGAATCGCCCTCATGAAATCCTTGGCCTCGGACTGGGCGGAGCCATTCAG
GACCCTGGTCCATCGGTTATCTGAGGACACGGAGGCACGGTCAATCCGCA
TCGCGGACTGGATGTTCCGACCGCTGCAAAATCGCTCGCACCCCAGGGTT
GTGCTGATGGGTGATTCGGCGCATACAATGACTATGTACCGTGGAGAAGG
GGCCAATAATGCCATCGTCGATGTACTGGATCTGACCCAACGTGTGGATA
TGCGTTCGCTAGGAACCATGTCGACACAAGCGCTGCGAGATGCATTGGAC
GCCTACGAGAACGACGTCTTCAGGCGCGCAGAGCCTAGTGTACTTAACTC
GCGCCAGGCCTGTGTCGACGCTCATGACTTCACACGTATCCTAGACGAGA
GCCCCCTCGTATCAGCCCGCGTGCTGAAGGAGGATACCACGGAGCAATAG
ATGAACCCGTGTTCCCGTGGAACCGAACATCCGTGCCTCCTCGCTGCCCA
CATCATGGATGATCTTCCCGTTCTCATCGTCGGCGCAGGCATCAGTGGCC
TTCTTCTGGCCCAGCATCTCCAGAAGCTCGGTGTCCCTTACAAGATCTTC
GAGCGCGATGCCGCCATCGACGCACGGAGCGGGGGTTGGGGGTTGACGCT
TCATTGGGCGCTCCCTGCACTGCGGGAACTCCTACCGGACCACCTCGTGC
AACGCCTCCCAGAGGCATATGTCAACAAGGCGGCGGCTGCTCGCGGTGAC
ACCGGTCGCTTTTCGTTCTTTGACCTGAAAACCGGATCTGCGTTGTACAG
CGTTCCAGCTGCGGAGCGGATTCGGGTCAGTCGTGTTCGATTGAGGCAGC
TGGTAGCCACGGGGCTCGATGTTCAGTGGAACAAAACTCTCCAAAATATC
GAGTCCACCGCCGATACCGTCACCGCGCATTTCGCAGACGGAACCTCCTA
CACAGGATGCCTCTTGATCGGCTGCGATGGATCGCGATCCCCCACCCGCG
AGATCTTGTACCCGGACAGCCATGAGATGAATCCACTACCGGTGCAGATC
CTCGGCGCAGCTACTCTGTATACAGCAGAGGAGATGGCAGGGGCTGCAGA
GATTGATCCATTCATATTTCAGGGCTCGCACCCTGAATCTAACGTCTTTC
TCTTCTTCAGCATACTCGATACCCCCAACAACTTCGTCGAAAGCAGCAAA
GACAAATATGAATGCCAGATCATACTATCATGGGCAGATTCCAAGGATAT
CGCAGTCCCCAGCGACAACGGGGAGCGAATCGCCCTCATGAAATCCTTGG
CCTCGGACTGGGCGGAGCCATTCAGGACCCTGGTCCATCGGTTATCTGAG
GACACGGAGGCACGGTCAATCCGCATCGCGGACTGGATGTTCCGACCGCT
GCAAAATCGCTCGCACCCCAGGGTTGTGCTGATGGGTGATTCGGCGCATA
CAATGACTATGTACCGTGGAGAAGGGGCCAATAATGCCATCGTCGATGTA
CTGGATCTGACCCAACGTGTGGATATGCGTTCGCTAGGAACCATGTCGAC
ACAAGCGCTGCGAGATGCATTGGACGCCTACGAGAACGACGTCTTCAGGC
GCGCAGAGCCTAGTGTACTTAACTCGCGCCAGGCCTGTGTCGACGCTCAT
GACTTCACACGTATCCTAGACGAGAGCCCCCTCGTATCAGCCCGCGTGCT
GAAGGAGGATACCACGGAGCAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011302-T1.utr5p1 | KJC3_011302-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011302-T1.utr3p1 | KJC3_011302-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002938 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF01494 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:250604..252342 + |
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