You are here

Home

KJC3_011306-T1, KJC3_011306-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011306-T1
Unique NameKJC3_011306-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:259980..260789+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011306-T1 ID=KJC3_011306-T1|Name=KJC3_011306-T1|organism=Aspergillus niger KJC3|type=mRNA|length=810bp|location=Sequence derived from alignment at ch8:259980..260789+ (Aspergillus niger KJC3)
ATGTACATGAAAGAGATATACACGGACTCCACCCCCTCCACCCTCCACAC
CTTCATCCAACAAAACCCCCTGGGCGTCCTCACTACCGCCATCCCCTCCT
CTACACACCCGTTACTCCAATCCACCCACATTCCCTGGGTACTCGACATT
CCTCCTCCCAGCACTGCCGATAACAGTAACACAGTCAAACTCCGCGGCCA
CATCGCCCGCGCCAACCCCCAATGCTCTGCCATCCTCGACTCCCTAACCA
CTCAACCCGAATCCATCCTCCCCACCGAAGTCCTCATCCTCTTCACCTCC
CCCTACCACAGCTACATCACCCCGCACTTCTACACCACCACCAAGCCCCT
CACCGGCAAAGTCGCCCCAACATGGAACTACGCCGCCGTGCAAGTCTACG
GCCGCGCACGGATCTACAACCCCCGTTCAGAGGGAGAGCTCGGCGAGCAG
GCCTCGATGTTCTTGGATACACAGCTCCGCGATCTATCGGCGCACTGTGA
GGGGGAGATCATGGGGCATACTACCACCGGTACTAGTGATACTCATACTC
ATAACAACCCGGAGGAGAAACCATGTCCCCGAGCATGGACCGTCGACGAA
GCGCCCGACGCATACATCAACATCCTGAAGAAGAATATCATCGGGATCGA
AGTGACTGTGACGGGAATGGACGGGAAATATAAAATGAGCCAGGAACGCG
GTGAGGGGGATCGGGAAGGGGTGCTAAAGGGTTTGGATGGGATGGGAGGG
GATGTCGCGAGGGGAGTGGCGGGGATGGTGAGGGAGTGTTGTTGTGATAC
TAGACCATGA
back to top

Coding sequence (CDS) from alignment at ch8:259980..260789+

>KJC3_011306-T1 ID=KJC3_011306-T1|Name=KJC3_011306-T1|organism=Aspergillus niger KJC3|type=CDS|length=810bp|location=Sequence derived from alignment at ch8:259980..260789+ (Aspergillus niger KJC3)
ATGTACATGAAAGAGATATACACGGACTCCACCCCCTCCACCCTCCACAC
CTTCATCCAACAAAACCCCCTGGGCGTCCTCACTACCGCCATCCCCTCCT
CTACACACCCGTTACTCCAATCCACCCACATTCCCTGGGTACTCGACATT
CCTCCTCCCAGCACTGCCGATAACAGTAACACAGTCAAACTCCGCGGCCA
CATCGCCCGCGCCAACCCCCAATGCTCTGCCATCCTCGACTCCCTAACCA
CTCAACCCGAATCCATCCTCCCCACCGAAGTCCTCATCCTCTTCACCTCC
CCCTACCACAGCTACATCACCCCGCACTTCTACACCACCACCAAGCCCCT
CACCGGCAAAGTCGCCCCAACATGGAACTACGCCGCCGTGCAAGTCTACG
GCCGCGCACGGATCTACAACCCCCGTTCAGAGGGAGAGCTCGGCGAGCAG
GCCTCGATGTTCTTGGATACACAGCTCCGCGATCTATCGGCGCACTGTGA
GGGGGAGATCATGGGGCATACTACCACCGGTACTAGTGATACTCATACTC
ATAACAACCCGGAGGAGAAACCATGTCCCCGAGCATGGACCGTCGACGAA
GCGCCCGACGCATACATCAACATCCTGAAGAAGAATATCATCGGGATCGA
AGTGACTGTGACGGGAATGGACGGGAAATATAAAATGAGCCAGGAACGCG
GTGAGGGGGATCGGGAAGGGGTGCTAAAGGGTTTGGATGGGATGGGAGGG
GATGTCGCGAGGGGAGTGGCGGGGATGGTGAGGGAGTGTTGTTGTGATAC
TAGACCATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011306KJC3_011306Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011306-T1.exon1KJC3_011306-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011306-T1.cdsKJC3_011306-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011306-T1KJC3_011306-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012349
DBxrefInterPro:IPR007396
DBxrefPFAM:PF04299
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:259980..260789 +
Powered by Drupal