You are here

Home

KJC3_011322-T1, KJC3_011322-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011322-T1
Unique NameKJC3_011322-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:300846..302041-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011322-T1 ID=KJC3_011322-T1|Name=KJC3_011322-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1196bp|location=Sequence derived from alignment at ch8:300846..302041- (Aspergillus niger KJC3)
ATGGAGCCCGCCCCGCTGCCTGCAATCATGTCCTCTGATTCGACCCCCGA
CCCCCGTCTGGAGAAGCCCCGGGTTGCAGTGGCCAGCCGGCTCAACTTCT
TCACCTCCCAACTGAACACCTCGATCGAGGCCTCCAGTATCGAGGACTTA
TGTTCCGTGTATAGGCCCTTTGAGCTCCTCCTGGAAACAGGGGCTCACAG
TGGCCTATGGTGGCTTGATATTACGGCCCCATCGGAAGAAGACATTGAAG
CCCTTGCGCGATTCTTCAACCTCCATCCCCTGACTACGGAGGATATCAAG
ACCCGTGAAACCAGAGAGAAGATCGAACTTTTCGGTCAGTATTACTTTCT
CTCTCTGCGACCGCCGCGTCGGCTCGAGACGGACACTGGAGTGCGTATCG
TCTCGCACAACCTGTACGCCGTGGTGTTTCGAGGCGGCGTTCTCAGCTTC
AGCTTCGACCCCAGTCTGCACACTAGCCATGTGCGACAGCGTATCAAGGA
GCACAGCAGCCATCTGCTGTTGACCAGCGATTGGATTTGCTATGCCCTGA
TGTAAGCCCCACCACTACTCTAGCTCTGTTACGGCTGTGTTTACTGATGC
CTGGCAGCGATGATATCGTTGACGGCTTTGCCCCGTTCATCAGTCGCGTT
GAAAATGGTGTTGTAACCGTGGAAGACTCTGTCTCCATCACTCGACCTGA
CGACATGGGACTCGCTTTGCAGCGCATCTTCAAACTGCGCAAGGAGGTCA
TGAATATTCGTCAGCCGCTGCACGACAAGATCGATGTCATCCGCTCCTTT
GCGCGGCACTGCGATATCTCCGACACCTCGTCGTCGCAAGTTGCCCTGTA
TCTTAGCGATATCTGCGATCACGTCGTCACCATGATTGCCAACCTCGAGC
AGGCCGAGCAGATGCTCTCGCGATTGCAGTCCAAGTACCTCACTCAGGTT
CATTTCGACTCCGGACGCATGCGCAATGGTATTGCATCGGCACTTAGCAA
GCTAACGGTTCTTGCTTCTATTCTCGTGCCGATGCAGTTCATCACGGGTC
TATTTGGAATGAATGTCAGAGTGCCAGGGAAGACACATGATGGGGACAAT
TCACTCACATGGTGGTTTAGCATTCTAGGTTTCATCCTGGGATTGACTGT
TATATTTGCCTGGGTGGCCAAACGAATCGGATTGCTCGATCGGTAA
back to top

Coding sequence (CDS) from alignment at ch8:300846..302041-

>KJC3_011322-T1 ID=KJC3_011322-T1|Name=KJC3_011322-T1|organism=Aspergillus niger KJC3|type=CDS|length=2280bp|location=Sequence derived from alignment at ch8:300846..302041- (Aspergillus niger KJC3)
CGATGATATCGTTGACGGCTTTGCCCCGTTCATCAGTCGCGTTGAAAATG
GTGTTGTAACCGTGGAAGACTCTGTCTCCATCACTCGACCTGACGACATG
GGACTCGCTTTGCAGCGCATCTTCAAACTGCGCAAGGAGGTCATGAATAT
TCGTCAGCCGCTGCACGACAAGATCGATGTCATCCGCTCCTTTGCGCGGC
ACTGCGATATCTCCGACACCTCGTCGTCGCAAGTTGCCCTGTATCTTAGC
GATATCTGCGATCACGTCGTCACCATGATTGCCAACCTCGAGCAGGCCGA
GCAGATGCTCTCGCGATTGCAGTCCAAGTACCTCACTCAGGTTCATTTCG
ACTCCGGACGCATGCGCAATGGTATTGCATCGGCACTTAGCAAGCTAACG
GTTCTTGCTTCTATTCTCGTGCCGATGCAGTTCATCACGGGTCTATTTGG
AATGAATGTCAGAGTGCCAGGGAAGACACATGATGGGGACAATTCACTCA
CATGGTGGTTTAGCATTCTAGGTTTCATCCTGGGATTGACTGTTATATTT
GCCTGGGTGGCCAAACGAATCGGATTGCTCGATCGGTAAATGGAGCCCGC
CCCGCTGCCTGCAATCATGTCCTCTGATTCGACCCCCGACCCCCGTCTGG
AGAAGCCCCGGGTTGCAGTGGCCAGCCGGCTCAACTTCTTCACCTCCCAA
CTGAACACCTCGATCGAGGCCTCCAGTATCGAGGACTTATGTTCCGTGTA
TAGGCCCTTTGAGCTCCTCCTGGAAACAGGGGCTCACAGTGGCCTATGGT
GGCTTGATATTACGGCCCCATCGGAAGAAGACATTGAAGCCCTTGCGCGA
TTCTTCAACCTCCATCCCCTGACTACGGAGGATATCAAGACCCGTGAAAC
CAGAGAGAAGATCGAACTTTTCGGTCAGTATTACTTTCTCTCTCTGCGAC
CGCCGCGTCGGCTCGAGACGGACACTGGAGTGCGTATCGTCTCGCACAAC
CTGTACGCCGTGGTGTTTCGAGGCGGCGTTCTCAGCTTCAGCTTCGACCC
CAGTCTGCACACTAGCCATGTGCGACAGCGTATCAAGGAGCACAGCAGCC
ATCTGCTGTTGACCAGCGATTGGATTTGCTATGCCCTGATCGATGATATC
GTTGACGGCTTTGCCCCGTTCATCAGTCGCGTTGAAAATGGTGTTGTAAC
CGTGGAAGACTCTGTCTCCATCACTCGACCTGACGACATGGGACTCGCTT
TGCAGCGCATCTTCAAACTGCGCAAGGAGGTCATGAATATTCGTCAGCCG
CTGCACGACAAGATCGATGTCATCCGCTCCTTTGCGCGGCACTGCGATAT
CTCCGACACCTCGTCGTCGCAAGTTGCCCTGTATCTTAGCGATATCTGCG
ATCACGTCGTCACCATGATTGCCAACCTCGAGCAGGCCGAGCAGATGCTC
TCGCGATTGCAGTCCAAGTACCTCACTCAGGTTCATTTCGACTCCGGACG
CATGCGCAATGGTATTGCATCGGCACTTAGCAAGCTAACGGTTCTTGCTT
CTATTCTCGTGCCGATGCAGTTCATCACGGGTCTATTTGGAATGAATGTC
AGAGTGCCAGGGAAGACACATGATGGGGACAATTCACTCACATGGTGGTT
TAGCATTCTAGGTTTCATCCTGGGATTGACTGTTATATTTGCCTGGGTGG
CCAAACGAATCGGATTGCTCGATCGGTAAATGGAGCCCGCCCCGCTGCCT
GCAATCATGTCCTCTGATTCGACCCCCGACCCCCGTCTGGAGAAGCCCCG
GGTTGCAGTGGCCAGCCGGCTCAACTTCTTCACCTCCCAACTGAACACCT
CGATCGAGGCCTCCAGTATCGAGGACTTATGTTCCGTGTATAGGCCCTTT
GAGCTCCTCCTGGAAACAGGGGCTCACAGTGGCCTATGGTGGCTTGATAT
TACGGCCCCATCGGAAGAAGACATTGAAGCCCTTGCGCGATTCTTCAACC
TCCATCCCCTGACTACGGAGGATATCAAGACCCGTGAAACCAGAGAGAAG
ATCGAACTTTTCGGTCAGTATTACTTTCTCTCTCTGCGACCGCCGCGTCG
GCTCGAGACGGACACTGGAGTGCGTATCGTCTCGCACAACCTGTACGCCG
TGGTGTTTCGAGGCGGCGTTCTCAGCTTCAGCTTCGACCCCAGTCTGCAC
ACTAGCCATGTGCGACAGCGTATCAAGGAGCACAGCAGCCATCTGCTGTT
GACCAGCGATTGGATTTGCTATGCCCTGAT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011322KJC3_011322Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011322-T1KJC3_011322-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011322-T1.cdsKJC3_011322-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011322-T1.exon2KJC3_011322-T1.exon2Aspergillus niger KJC3exon
KJC3_011322-T1.exon1KJC3_011322-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefPFAM:PF01544
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:300846..302041 -
Powered by Drupal