|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:333131..336052+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011337-T1 ID=KJC3_011337-T1|Name=KJC3_011337-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2922bp|location=Sequence derived from alignment at ch8:333131..336052+ (Aspergillus niger KJC3)
CAGAAATTCAATCTATCAGTAGCCGCTCTGAAGATGCCTGTTCATATCTC
CGCGGGATTGATGATACTTGGTTCTGGCTCGTTCTAAGGTCAACCGAGTA
ACTAACAGACTGCTACACCCGCCATTTACTCCCTAGCTTGACATCTTGGT
AATGCTTTTGCAGCGTGCAAGTATACACCTCAGGAGAACACAATCATTGC
TATCGGCGATTTGTTGAAACTTGCAAGGATCGAATCGAGGCCCTGCTCCG
GCCGAACCAACACCCACCCTTCCGAGATGTAGCCGCCGCCGGCCGGATAT
TACACGGCTGCTCCTTCCAAGCGATAGGTCAGGCTATGTTATACTCCTGG
ATCATACGATGCCAGTATACTGATGGGTGTCATTGCTGCGTCAGGGCGAG
AGGAGGCGTTTTTGTTTCTCTGGGACGCCGAAAGCTTCCCCGCTCCAGGC
CCGGCGTTCGGCAACAACAGCCCTTGTAGGGTTCTACGGGAAGCAACCCC
GAAGGCAATAGCCCGTATACTAGAGGTTATATGAGTGCTATAATGTGTTG
ATTTGACATCTCAAGTATAATCAGTCGTGGTAAAGTTAACTGTAATAGGG
TGGTAATCATCATACGAAAATGAGTTCCGCTAGGTCGCCTTTCGACGCAG
AGTCCTGGTCTGGGAAACCACTAAATGTGTGATGATATGTTCATCTTAAA
ACAGACCGTCAGGATACTAACTTGACGTCTAGGTTATATACGCTGGAATT
ACAGAGCTCGTCTGCGACAATTCGAGCGGAAGAGTTGCAATTGCTATCCG
CAATTTGACAGATCTGGTCGACTTCCTTGTGTGTACTTGGCACGCTCTGC
GTCCAAACGTGTCGGACTATGCAACCGACACTATAATTGCAGAGCTGAAA
GACTACAGGGAGAAGAATACTGAGAAGATAATTAGCGCTGCTTTGCATCA
ATCCCTTGTCTATAGATGTCCGTCACTATGCTCGCGCCTATGGAGCGAAC
TCGATATAGTCCCTTTAGTTTTGGAGCATAAGGATCGTGAAAGACGACAT
GATGACCAGGGAGAGCTAGCGACGTTTGCCGGGTGGAATAAGAAGGAGCT
CGACGAGCGGGCGGATTCAATGGTGCGGAAGTGCATTCGGTTGGTGTTCC
CTTGATGGTGAGGGCTAAATACTGACTTGTGTAGTTCTTTTGGCATTGGC
CATGTGCTACATAATCATATAAATTTCGACGGGTCGGTGGATGTCGACAG
AGGCTATCATGTACACCTTGCTAATGCGAAAGACTATGAGAAGACTGTTG
ACCCTGCTACATGGTCTATGGCTCAATGTTTTGCCCAGGATCTGAGGGAA
AGGGAGGTGAAGGTGGCTTTCTTCAGTATGACTTGCCAAGGAAAACCAGA
TGTTCCGACCAGACATGCCTTGTCACGGTTCACCAAGAGTCTGGGAGTTC
GTATCAAATGGTATGACTCTCATCCTATGGGGTCAATCTAAACGATATTC
TTACATTGTGCCCACAGGTTTGTGCCAAAGCCACGTCCGGGGATGATTCC
CCTCATCCGGAAGATGCAGGACACCCTAGAGGGACAGGGCGATCCCCTGT
CGGATATCACCATCAACGATGAGCTACTCATCCTTGACTTTGCATACGCC
AACGCCAGGAGGTATTGGCTGTGCGAGAATGGACCGCTTAGGCCCCGTGC
GGAGGGAGGCGTGGACGTAGTGATCATTGACAGCGCGCCGCTTCTAACAT
TGGCAATTCTTTCTAAGCAGCAAGATCCTGAGCGGCCTGTCATATTTGAG
AGCAGCCTCCAGCCCCAGGGAGTCTCACTCAGTGGGACTAGTAGCCCGCA
GTCTCGAGCATGGGACTTTATACGAACCCGGCTAACACACGTTGATTTGG
TGGTATCGCTGCTCCCTAAGGAACTTGCGCCGCGCATAATGCCTGAGGAG
AATGTTGGCTACATGTCATTCTCTGTGGACCAGTACTGTCCCTAGCCTTC
TATGATTTGCACGGATGCTGATACAGTGTAGACTCGATGGTCAAAACAAA
CCTCTAACTGACTGGGACGTGGGCTTCTACGGTCGTGAGTTCAGCTCGCT
ATGCCGAACGCTTCAAATGTCCATCATACGCTATCCAGAGGGTAATACCC
CAGACCTGCCCCCTTGGCCAATACTAAACTGTCTGCACGTAGAGCAATAT
ATCCTCCACTTATCCCAATTCCGACCCGGAGACGGAACACTTTGTCTTCT
CCACTCATACCAGAAATTCTGCGATGCCTATACCAAGGAGCATCCAGGCC
GCCAAGTCCCCAAGCTCCTGATCTGTCACCGCGGACCCTTCCGAACCCCA
GAAAGTACCGTTTTCTACGACGCAGCAATGTCCCAAATTGACAGTAGTGA
GACCCTATCTACGTCCGTCTGCATCATTCCAATCGGAGCCGTCGATCAAA
TGTGGAACGCCCTACTCACGAATGCAAGAGCGCTCGTCCAGCTCTCCACG
CTGCACGGGGTCCCTGAAATGCTTCTCGCGGCTATTCAAAAGGGGACGCC
GGTGATTGCTGTTCGGGAAGCCGAGCTGTTCCCCTTTGTGCATGAATCAG
AAAATGCTATCCTGGTTGACAAGGGTGATGAGGAGGGGATTGCTCGGTGT
TTTTCGAGGATTTTCAGTGTTGATGAGGTTCGTCAGGGGGAAGGAGATGC
GGGGTTCAGGAAGCTGTCTGACTCGAATACTACGGTTGGAAATGCGGTCT
GTTGGTTGTATTTGGCGTCGAAGATGTCGAGGGGGGATAAGTTTGAGCCG
AGGGGGGCAGATATTTATAAGTTGGCGAGAGAGGAGGCCGGGTATAATGA
GTGTGATTGGCATGCAGTGTAGTTAGTCAGTCACAATTGGGAACATAATG
AGATTGAAAAATGCGATAGCTG back to topCoding sequence (CDS) from alignment at ch8:333131..336052+ >KJC3_011337-T1 ID=KJC3_011337-T1|Name=KJC3_011337-T1|organism=Aspergillus niger KJC3|type=CDS|length=4347bp|location=Sequence derived from alignment at ch8:333131..336052+ (Aspergillus niger KJC3)
ATGGCTCAATGTTTTGCCCAGGATCTGAGGGAAAGGGAGGTGAAGGTGGC
TTTCTTCAGTATGACTTGCCAAGGAAAACCAGATGTTCCGACCAGACATG
CCTTGTCACGGTTCACCAAGAGTCTGGGAGTTCGTATCAAATGGTTTGTG
CCAAAGCCACGTCCGGGGATGATTCCCCTCATCCGGAAGATGCAGGACAC
CCTAGAGGGACAGGGCGATCCCCTGTCGGATATCACCATCAACGATGAGC
TACTCATCCTTGACTTTGCATACGCCAACGCCAGGAGGTATTGGCTGTGC
GAGAATGGACCGCTTAGGCCCCGTGCGGAGGGAGGCGTGGACGTAGTGAT
CATTGACAGCGCGCCGCTTCTAACATTGGCAATTCTTTCTAAGCAGCAAG
ATCCTGAGCGGCCTGTCATATTTGAGAGCAGCCTCCAGCCCCAGGGAGTC
TCACTCAGTGGGACTAGTAGCCCGCAGTCTCGAGCATGGGACTTTATACG
AACCCGGCTAACACACGTTGATTTGGTGGTATCGCTGCTCCCTAAGGAAC
TTGCGCCGCGCATAATGCCTGAGGAGAATGTTGGCTACATGTCATTCTCT
GTGGACCAACTCGATGGTCAAAACAAACCTCTAACTGACTGGGACGTGGG
CTTCTACGGTCGTGAGTTCAGCTCGCTATGCCGAACGCTTCAAATGTCCA
TCATACGCTATCCAGAGGGTAATACCCCAGACCTGCCCCCTTGGCCAATA
CTAAACTGTCTGCACGTAGAGCAATATATCCTCCACTTATCCCAATTCCG
ACCCGGAGACGGAACACTTTGTCTTCTCCACTCATACCAGAAATTCTGCG
ATGCCTATACCAAGGAGCATCCAGGCCGCCAAGTCCCCAAGCTCCTGATC
TGTCACCGCGGACCCTTCCGAACCCCAGAAAGTACCGTTTTCTACGACGC
AGCAATGTCCCAAATTGACAGTAGTGAGACCCTATCTACGTCCGTCTGCA
TCATTCCAATCGGAGCCGTCGATCAAATGTGGAACGCCCTACTCACGAAT
GCAAGAGCGCTCGTCCAGCTCTCCACGCTGCACGGGGTCCCTGAAATGCT
TCTCGCGGCTATTCAAAAGGGGACGCCGGTGATTGCTGTTCGGGAAGCCG
AGCTGTTCCCCTTTGTGCATGAATCAGAAAATGCTATCCTGGTTGACAAG
GGTGATGAGGAGGGGATTGCTCGGTGTTTTTCGAGGATTTTCAGTGTTGA
TGAGGTTCGTCAGGGGGAAGGAGATGCGGGGTTCAGGAAGCTGTCTGACT
CGAATACTACGGTTGGAAATGCGGTCTGTTGGTTGTATTTGGCGTCGAAG
ATGTCGAGGGGGGATAAGTTTGAGCCGAGGGGGGCAGATATTTATAAGTT
GGCGAGAGAGGAGGCCGGGTATAATGAGTGTGATTGGCATGCAGTGTAGA
TGGCTCAATGTTTTGCCCAGGATCTGAGGGAAAGGGAGGTGAAGGTGGCT
TTCTTCAGTATGACTTGCCAAGGAAAACCAGATGTTCCGACCAGACATGC
CTTGTCACGGTTCACCAAGAGTCTGGGAGTTCGTATCAAATGGTTTGTGC
CAAAGCCACGTCCGGGGATGATTCCCCTCATCCGGAAGATGCAGGACACC
CTAGAGGGACAGGGCGATCCCCTGTCGGATATCACCATCAACGATGAGCT
ACTCATCCTTGACTTTGCATACGCCAACGCCAGGAGGTATTGGCTGTGCG
AGAATGGACCGCTTAGGCCCCGTGCGGAGGGAGGCGTGGACGTAGTGATC
ATTGACAGCGCGCCGCTTCTAACATTGGCAATTCTTTCTAAGCAGCAAGA
TCCTGAGCGGCCTGTCATATTTGAGAGCAGCCTCCAGCCCCAGGGAGTCT
CACTCAGTGGGACTAGTAGCCCGCAGTCTCGAGCATGGGACTTTATACGA
ACCCGGCTAACACACGTTGATTTGGTGGTATCGCTGCTCCCTAAGGAACT
TGCGCCGCGCATAATGCCTGAGGAGAATGTTGGCTACATGTCATTCTCTG
TGGACCAACTCGATGGTCAAAACAAACCTCTAACTGACTGGGACGTGGGC
TTCTACGGTCGTGAGTTCAGCTCGCTATGCCGAACGCTTCAAATGTCCAT
CATACGCTATCCAGAGGGTAATACCCCAGACCTGCCCCCTTGGCCAATAC
TAAACTGTCTGCACGTAGAGCAATATATCCTCCACTTATCCCAATTCCGA
CCCGGAGACGGAACACTTTGTCTTCTCCACTCATACCAGAAATTCTGCGA
TGCCTATACCAAGGAGCATCCAGGCCGCCAAGTCCCCAAGCTCCTGATCT
GTCACCGCGGACCCTTCCGAACCCCAGAAAGTACCGTTTTCTACGACGCA
GCAATGTCCCAAATTGACAGTAGTGAGACCCTATCTACGTCCGTCTGCAT
CATTCCAATCGGAGCCGTCGATCAAATGTGGAACGCCCTACTCACGAATG
CAAGAGCGCTCGTCCAGCTCTCCACGCTGCACGGGGTCCCTGAAATGCTT
CTCGCGGCTATTCAAAAGGGGACGCCGGTGATTGCTGTTCGGGAAGCCGA
GCTGTTCCCCTTTGTGCATGAATCAGAAAATGCTATCCTGGTTGACAAGG
GTGATGAGGAGGGGATTGCTCGGTGTTTTTCGAGGATTTTCAGTGTTGAT
GAGGTTCGTCAGGGGGAAGGAGATGCGGGGTTCAGGAAGCTGTCTGACTC
GAATACTACGGTTGGAAATGCGGTCTGTTGGTTGTATTTGGCGTCGAAGA
TGTCGAGGGGGGATAAGTTTGAGCCGAGGGGGGCAGATATTTATAAGTTG
GCGAGAGAGGAGGCCGGGTATAATGAGTGTGATTGGCATGCAGTGTAGAT
GGCTCAATGTTTTGCCCAGGATCTGAGGGAAAGGGAGGTGAAGGTGGCTT
TCTTCAGTATGACTTGCCAAGGAAAACCAGATGTTCCGACCAGACATGCC
TTGTCACGGTTCACCAAGAGTCTGGGAGTTCGTATCAAATGGTTTGTGCC
AAAGCCACGTCCGGGGATGATTCCCCTCATCCGGAAGATGCAGGACACCC
TAGAGGGACAGGGCGATCCCCTGTCGGATATCACCATCAACGATGAGCTA
CTCATCCTTGACTTTGCATACGCCAACGCCAGGAGGTATTGGCTGTGCGA
GAATGGACCGCTTAGGCCCCGTGCGGAGGGAGGCGTGGACGTAGTGATCA
TTGACAGCGCGCCGCTTCTAACATTGGCAATTCTTTCTAAGCAGCAAGAT
CCTGAGCGGCCTGTCATATTTGAGAGCAGCCTCCAGCCCCAGGGAGTCTC
ACTCAGTGGGACTAGTAGCCCGCAGTCTCGAGCATGGGACTTTATACGAA
CCCGGCTAACACACGTTGATTTGGTGGTATCGCTGCTCCCTAAGGAACTT
GCGCCGCGCATAATGCCTGAGGAGAATGTTGGCTACATGTCATTCTCTGT
GGACCAACTCGATGGTCAAAACAAACCTCTAACTGACTGGGACGTGGGCT
TCTACGGTCGTGAGTTCAGCTCGCTATGCCGAACGCTTCAAATGTCCATC
ATACGCTATCCAGAGGGTAATACCCCAGACCTGCCCCCTTGGCCAATACT
AAACTGTCTGCACGTAGAGCAATATATCCTCCACTTATCCCAATTCCGAC
CCGGAGACGGAACACTTTGTCTTCTCCACTCATACCAGAAATTCTGCGAT
GCCTATACCAAGGAGCATCCAGGCCGCCAAGTCCCCAAGCTCCTGATCTG
TCACCGCGGACCCTTCCGAACCCCAGAAAGTACCGTTTTCTACGACGCAG
CAATGTCCCAAATTGACAGTAGTGAGACCCTATCTACGTCCGTCTGCATC
ATTCCAATCGGAGCCGTCGATCAAATGTGGAACGCCCTACTCACGAATGC
AAGAGCGCTCGTCCAGCTCTCCACGCTGCACGGGGTCCCTGAAATGCTTC
TCGCGGCTATTCAAAAGGGGACGCCGGTGATTGCTGTTCGGGAAGCCGAG
CTGTTCCCCTTTGTGCATGAATCAGAAAATGCTATCCTGGTTGACAAGGG
TGATGAGGAGGGGATTGCTCGGTGTTTTTCGAGGATTTTCAGTGTTGATG
AGGTTCGTCAGGGGGAAGGAGATGCGGGGTTCAGGAAGCTGTCTGACTCG
AATACTACGGTTGGAAATGCGGTCTGTTGGTTGTATTTGGCGTCGAAGAT
GTCGAGGGGGGATAAGTTTGAGCCGAGGGGGGCAGATATTTATAAGTTGG
CGAGAGAGGAGGCCGGGTATAATGAGTGTGATTGGCATGCAGTGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011337-T1.utr3p1 | KJC3_011337-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:333131..336052 + |
|
