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KJC3_011365-T1, KJC3_011365-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011365-T1
Unique NameKJC3_011365-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:405585..407900+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011365-T1 ID=KJC3_011365-T1|Name=KJC3_011365-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2316bp|location=Sequence derived from alignment at ch8:405585..407900+ (Aspergillus niger KJC3)
ATGGCCGACGACGGTCTCCTTCTCAACTTCGCCATCCCGGACACGACAGT
CCTCAGACCCCAAAAAACCAAAGTAAAAGGCGGCACATGGCGGGACCGAC
TCAGCGCAAAGAAAATCGCCGCGCACCGAACGAACAACCCGCGCAAAGAG
AAATCAGCCTCAAATGGCGAGCAGAATAGCAACCCTCGGAATCCGAATCG
CATTCAAGTATCCGGTCCGCGGCCGGTGAAGAGACAGCGCATTGAAGATG
ATGACGGAAACGGAGGATCGCAACCACGCCAGCAGCAGCAACAACATCCC
GGGGCGCCCCGACAGTTCGTATCATCCCTGTTCTCGAAGAACCCGAGGCC
CCGGAACGCCGTTGAAGAGAAGAACGAAGCCGGAGCCGAGGTAGAGGACG
CCAAGCCGACGAACGCGCCGCTGATCGATGGACTGGACACATTCACGAAC
CTGGGACTATCGGCACCGCTGGCGGCGCATTTGCTGACAAAACTGGAGGT
GAAGGCGCCGACAGCGATTCAGAAAGCGAGTATCACGCAACTATTGAAGG
AGGAGAGTGATGCGTTCATACAGGCCGAGACCGGATCCGGAAAGACGATG
GCGTATCTGCTGCCGCTTGTGCAACGGATAATGACGATTTCGCTGAATCA
GAAGAAGAGGGAGGAAGGGGAGCAAGTGCAGCGCGATAGTGGGTTATTTG
CTATTGTGTTGGCGCCGACGAGAGAGTTGTGTAAGCAGATTGCGGTGGTA
TTGGAGGGGTTGTTGCGATGTGCGCATTGGATTGTGGCGGGGACGGTGAT
TGGAGGAGAGAAGAAGAAGAGTGAGAAGGCGCGGTTGAGGAAGGGATTGA
ATATCTTGGTTGCGACGCCGGGACGGTTGGCGGATCATTTGGAGAATACG
CAGGCGTTGGATGTGAGTAATGTGCGGTGGTTGGTGTTGGATGAGGGAGA
TCGGTTGATGGAGTTGGGGTTCGAGAAGGAGTTGGCGGGGATTATTCAGA
AGCTGGATGCTAGGCAGCGCCCGAGTCGGATTCCTGGGATCCCCGCGAAG
AGGACGACGATATTGTGTTCGGCTACGTTGAAGATGACTGTGCAGAAGCT
GGGAGAGATCAGTTTGAAGGATGCGGTGCATATTCAGGCGGATCCCGCGG
ATGAAGATGGCGAGCCAAGAAAGAAGGACGAGGATGATGCGTTCCGGGTG
CCGGCGCAGCTGAAGCAGTCATATGCGATTGTCGCGTCGAAGCTACGGCT
TGTTACGCTTACGGCTTTTATGAAACGGACGTTTATGAGAAAGGGGTCTG
TTATGAAGGCTATCATTTTTGTGTCTTGTGCGGACTCTGTCGACTTCCAC
TTTGAGGTGTTCACGCGGAAGAATGGAGATGAGGAAGAGAAGAAGGAAGA
GAGTGAGGATAGTGATGAGGAGGATGCAGAAGAGAAGAGGAAGAAGCTCG
GCGCTTCGGCTCATGGAACCATCGCGCCTGCCACGGCCTTTTCGAACCCC
TCCAACCCGGTGGCGCTGCATAGACTGCACGGTTCTCTGCCTCAACATGT
CCGGACAGCCACCCTGGGTGCTTTTGCCCGCAACCGCGAACCTTCCGTGC
TCATCTGTACTGACGTTGCGTCCCGTGGTCTGGATCTGCCGAATGTTGAC
CTGGTCGTGGAGTACGACCCTGCCTTCAGCGCCGAGGACCATCTGCACAG
AATCGGACGTACTGCGCGTCTGGGGCGTGACGGTCGTGCACTCATTTTCC
TCATGCCCGGCTGTGAGGAGGGATACGTCGACATTCTGAAGAAGGGCTAC
CGGGACGGTGGAAAGGCTCTGACACGCAACAGCGCGGACGACATTCTGAA
GCGCGGATTTGGAGGAAACGTCGAGTCGCAGAACGTAGACTGGGAGGAAA
AGGCAACCGAATGGCAGCTGGATGTGGAACGATGGGCTTTGGAAAACAAA
AACTACCTCGAAATGGCCCGGCGAGCTTATCAGTCTCATATTCGCGCCTA
TGCCACACATATCGCCAACGAGCGGAGCATGTTCAACATTAAGGAGCTTC
ATCTCGGACATCTGGCGAAGAGTTTCGCTCTGCGTGATCGTCCCAGCAAG
ATCAATGTCCCTGGTCTTCGCCAAGCACAGGCTGACACCAAGAAGGATTT
CAAGGCCGACCGCAAACCGGTCGCTGGAAAGAAGAGGAAGGCTGGTGGTC
ACGACGACGACGATGATGATGTTCCTCGTCAAACCGACACTCTCACGGCA
GCTCAAAAGATGAGGGCCAAGATGAAGGAGCACATGGCCGGTGCAAGCGA
GTTCAATCTTGCTTGA
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Coding sequence (CDS) from alignment at ch8:405585..407900+

>KJC3_011365-T1 ID=KJC3_011365-T1|Name=KJC3_011365-T1|organism=Aspergillus niger KJC3|type=CDS|length=2316bp|location=Sequence derived from alignment at ch8:405585..407900+ (Aspergillus niger KJC3)
ATGGCCGACGACGGTCTCCTTCTCAACTTCGCCATCCCGGACACGACAGT
CCTCAGACCCCAAAAAACCAAAGTAAAAGGCGGCACATGGCGGGACCGAC
TCAGCGCAAAGAAAATCGCCGCGCACCGAACGAACAACCCGCGCAAAGAG
AAATCAGCCTCAAATGGCGAGCAGAATAGCAACCCTCGGAATCCGAATCG
CATTCAAGTATCCGGTCCGCGGCCGGTGAAGAGACAGCGCATTGAAGATG
ATGACGGAAACGGAGGATCGCAACCACGCCAGCAGCAGCAACAACATCCC
GGGGCGCCCCGACAGTTCGTATCATCCCTGTTCTCGAAGAACCCGAGGCC
CCGGAACGCCGTTGAAGAGAAGAACGAAGCCGGAGCCGAGGTAGAGGACG
CCAAGCCGACGAACGCGCCGCTGATCGATGGACTGGACACATTCACGAAC
CTGGGACTATCGGCACCGCTGGCGGCGCATTTGCTGACAAAACTGGAGGT
GAAGGCGCCGACAGCGATTCAGAAAGCGAGTATCACGCAACTATTGAAGG
AGGAGAGTGATGCGTTCATACAGGCCGAGACCGGATCCGGAAAGACGATG
GCGTATCTGCTGCCGCTTGTGCAACGGATAATGACGATTTCGCTGAATCA
GAAGAAGAGGGAGGAAGGGGAGCAAGTGCAGCGCGATAGTGGGTTATTTG
CTATTGTGTTGGCGCCGACGAGAGAGTTGTGTAAGCAGATTGCGGTGGTA
TTGGAGGGGTTGTTGCGATGTGCGCATTGGATTGTGGCGGGGACGGTGAT
TGGAGGAGAGAAGAAGAAGAGTGAGAAGGCGCGGTTGAGGAAGGGATTGA
ATATCTTGGTTGCGACGCCGGGACGGTTGGCGGATCATTTGGAGAATACG
CAGGCGTTGGATGTGAGTAATGTGCGGTGGTTGGTGTTGGATGAGGGAGA
TCGGTTGATGGAGTTGGGGTTCGAGAAGGAGTTGGCGGGGATTATTCAGA
AGCTGGATGCTAGGCAGCGCCCGAGTCGGATTCCTGGGATCCCCGCGAAG
AGGACGACGATATTGTGTTCGGCTACGTTGAAGATGACTGTGCAGAAGCT
GGGAGAGATCAGTTTGAAGGATGCGGTGCATATTCAGGCGGATCCCGCGG
ATGAAGATGGCGAGCCAAGAAAGAAGGACGAGGATGATGCGTTCCGGGTG
CCGGCGCAGCTGAAGCAGTCATATGCGATTGTCGCGTCGAAGCTACGGCT
TGTTACGCTTACGGCTTTTATGAAACGGACGTTTATGAGAAAGGGGTCTG
TTATGAAGGCTATCATTTTTGTGTCTTGTGCGGACTCTGTCGACTTCCAC
TTTGAGGTGTTCACGCGGAAGAATGGAGATGAGGAAGAGAAGAAGGAAGA
GAGTGAGGATAGTGATGAGGAGGATGCAGAAGAGAAGAGGAAGAAGCTCG
GCGCTTCGGCTCATGGAACCATCGCGCCTGCCACGGCCTTTTCGAACCCC
TCCAACCCGGTGGCGCTGCATAGACTGCACGGTTCTCTGCCTCAACATGT
CCGGACAGCCACCCTGGGTGCTTTTGCCCGCAACCGCGAACCTTCCGTGC
TCATCTGTACTGACGTTGCGTCCCGTGGTCTGGATCTGCCGAATGTTGAC
CTGGTCGTGGAGTACGACCCTGCCTTCAGCGCCGAGGACCATCTGCACAG
AATCGGACGTACTGCGCGTCTGGGGCGTGACGGTCGTGCACTCATTTTCC
TCATGCCCGGCTGTGAGGAGGGATACGTCGACATTCTGAAGAAGGGCTAC
CGGGACGGTGGAAAGGCTCTGACACGCAACAGCGCGGACGACATTCTGAA
GCGCGGATTTGGAGGAAACGTCGAGTCGCAGAACGTAGACTGGGAGGAAA
AGGCAACCGAATGGCAGCTGGATGTGGAACGATGGGCTTTGGAAAACAAA
AACTACCTCGAAATGGCCCGGCGAGCTTATCAGTCTCATATTCGCGCCTA
TGCCACACATATCGCCAACGAGCGGAGCATGTTCAACATTAAGGAGCTTC
ATCTCGGACATCTGGCGAAGAGTTTCGCTCTGCGTGATCGTCCCAGCAAG
ATCAATGTCCCTGGTCTTCGCCAAGCACAGGCTGACACCAAGAAGGATTT
CAAGGCCGACCGCAAACCGGTCGCTGGAAAGAAGAGGAAGGCTGGTGGTC
ACGACGACGACGATGATGATGTTCCTCGTCAAACCGACACTCTCACGGCA
GCTCAAAAGATGAGGGCCAAGATGAAGGAGCACATGGCCGGTGCAAGCGA
GTTCAATCTTGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP7KJC3_011365Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011365-T1.exon1KJC3_011365-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011365-T1.cdsKJC3_011365-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011365-T1KJC3_011365-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260KNR
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR025313
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF13959
DBxrefPFAM:PF00270
ProductATP-dependent RNA helicase dbp7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:405585..407900 +
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