|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:407937..409308- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011366-T1 ID=KJC3_011366-T1|Name=KJC3_011366-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1372bp|location=Sequence derived from alignment at ch8:407937..409308- (Aspergillus niger KJC3)
ATGAGCGCACAATCCCCGCAGGTGCGGCAACCACCGGCAACCCCCACTTA
CATTTTACGCGGTCATGCCGCTGCCATCCACGCGCTACAGATATTCCACC
AAAACCTAAGGCTCGTTTCAGGAGACGCAGACGGATGGATTGTCGTATGG
GACCTAGTCTCAAAGCGCCCTCGAGCGACATGGAAGGCCCATGACGGCGC
TGTTCTTGAAGTCAAAGGTTTTAGCTTCGGAAATGGTGCTGTTACAGAGG
TGTTCACGTGTGTTAACTCTCCATCATTCTCAAGGGCCATCTAACAGTGT
CTACAGGCATGGAAGAGACCATAAACTGCGCGTATGGAGGTTCAGCCTTC
AGGATGAGGAGTCTCTTCAGAAAGTCCTCCCCGTGGACATCGAGAAAACC
TCATCGACTGCCGCAAGCCAGCCATGGCTCGTACATTCGCTTCCGGTGAA
TGCGCTGAATTTCTGCGCGTTCTCCATGGTTTTCCTTCCTCCGGATAAAG
CAAATACTGCAAGCGATGCCAGTGAGGCCCCGAAAGAAAACACCTCTCTT
TCATCAGTGCTTATCGCCGTCCCTAATGCTCTGAACTCTGGCGCGATCGA
TCTCTTTCATCTCCCCCAGGAGAGACGTATCTGCACCATTCCGGCGGATA
CGGAAGTGCAAACTGGAATGGTTATGGCGGCTAACCTCGTCATATCTCCA
TCTGGGGAGTTGTATGTTGCTTCCGCTTACGAAGACGGTCGAGTTATGGT
CCATGGCTGCAGGGGATCGTTACAGGAAAAAGACCTGACGCAGAGTACCA
AAACGCCATGGAAATGGGAGAAGCTGTACGTTTGTCGGGCTCACTCACAA
CCGGTTCTGTCGCTTCACGTTTCGCCTGCTGGCAATTACTTCTTCTCTTC
ATCAGCCGATGCGGTGCTGGCGAAGCATCCTATTCCTTCGCTGGGTAGCC
CAGGACATGCCCCGGAAGAGTTGCCGATCAGGTCGATTAACACGAAGCAT
GCGGGCCAGCAAGGTGTGCGGATACGGTCTGATGGGAAGATTTTCGCGAC
TGCCGGGTGGGACTCCAGGGTCAGGGTCTACTCGTGCAAGACGATGAAAG
AACTAGCCGTCTTGAAGTGGCATAAAGATGGATGCTACGCTGTAGCGTTT
GCGGATGTTGATGTATTTGAAGTACGCGAGAAATCGGATGAGGAGAAGCC
TACGGTTTCGCCTAACGACAATGGCAATCAAGAAAACCAGCTTGCCGGAC
GGGCAGAAACTGAATTCTCGCTTGCAACAGTGCATCGCCAAAGATACGAG
AAGGTGCAAAACACCCATTGGTTAGCTGCTGGGTCAAAGGACGGAAAAAT
CTCATTGTGGGATATCTATTGA back to topCoding sequence (CDS) from alignment at ch8:407937..409308- >KJC3_011366-T1 ID=KJC3_011366-T1|Name=KJC3_011366-T1|organism=Aspergillus niger KJC3|type=CDS|length=2646bp|location=Sequence derived from alignment at ch8:407937..409308- (Aspergillus niger KJC3)
GCATGGAAGAGACCATAAACTGCGCGTATGGAGGTTCAGCCTTCAGGATG
AGGAGTCTCTTCAGAAAGTCCTCCCCGTGGACATCGAGAAAACCTCATCG
ACTGCCGCAAGCCAGCCATGGCTCGTACATTCGCTTCCGGTGAATGCGCT
GAATTTCTGCGCGTTCTCCATGGTTTTCCTTCCTCCGGATAAAGCAAATA
CTGCAAGCGATGCCAGTGAGGCCCCGAAAGAAAACACCTCTCTTTCATCA
GTGCTTATCGCCGTCCCTAATGCTCTGAACTCTGGCGCGATCGATCTCTT
TCATCTCCCCCAGGAGAGACGTATCTGCACCATTCCGGCGGATACGGAAG
TGCAAACTGGAATGGTTATGGCGGCTAACCTCGTCATATCTCCATCTGGG
GAGTTGTATGTTGCTTCCGCTTACGAAGACGGTCGAGTTATGGTCCATGG
CTGCAGGGGATCGTTACAGGAAAAAGACCTGACGCAGAGTACCAAAACGC
CATGGAAATGGGAGAAGCTGTACGTTTGTCGGGCTCACTCACAACCGGTT
CTGTCGCTTCACGTTTCGCCTGCTGGCAATTACTTCTTCTCTTCATCAGC
CGATGCGGTGCTGGCGAAGCATCCTATTCCTTCGCTGGGTAGCCCAGGAC
ATGCCCCGGAAGAGTTGCCGATCAGGTCGATTAACACGAAGCATGCGGGC
CAGCAAGGTGTGCGGATACGGTCTGATGGGAAGATTTTCGCGACTGCCGG
GTGGGACTCCAGGGTCAGGGTCTACTCGTGCAAGACGATGAAAGAACTAG
CCGTCTTGAAGTGGCATAAAGATGGATGCTACGCTGTAGCGTTTGCGGAT
GTTGATGTATTTGAAGTACGCGAGAAATCGGATGAGGAGAAGCCTACGGT
TTCGCCTAACGACAATGGCAATCAAGAAAACCAGCTTGCCGGACGGGCAG
AAACTGAATTCTCGCTTGCAACAGTGCATCGCCAAAGATACGAGAAGGTG
CAAAACACCCATTGGTTAGCTGCTGGGTCAAAGGACGGAAAAATCTCATT
GTGGGATATCTATTGAATGAGCGCACAATCCCCGCAGGTGCGGCAACCAC
CGGCAACCCCCACTTACATTTTACGCGGTCATGCCGCTGCCATCCACGCG
CTACAGATATTCCACCAAAACCTAAGGCTCGTTTCAGGAGACGCAGACGG
ATGGATTGTCGTATGGGACCTAGTCTCAAAGCGCCCTCGAGCGACATGGA
AGGCCCATGACGGCGCTGTTCTTGAAGTCAAAGGTTTTAGCTTCGGAAAT
GGTGCTGTTACAGAGGTGTTCACGCATGGAAGAGACCATAAACTGCGCGT
ATGGAGGTTCAGCCTTCAGGATGAGGAGTCTCTTCAGAAAGTCCTCCCCG
TGGACATCGAGAAAACCTCATCGACTGCCGCAAGCCAGCCATGGCTCGTA
CATTCGCTTCCGGTGAATGCGCTGAATTTCTGCGCGTTCTCCATGGTTTT
CCTTCCTCCGGATAAAGCAAATACTGCAAGCGATGCCAGTGAGGCCCCGA
AAGAAAACACCTCTCTTTCATCAGTGCTTATCGCCGTCCCTAATGCTCTG
AACTCTGGCGCGATCGATCTCTTTCATCTCCCCCAGGAGAGACGTATCTG
CACCATTCCGGCGGATACGGAAGTGCAAACTGGAATGGTTATGGCGGCTA
ACCTCGTCATATCTCCATCTGGGGAGTTGTATGTTGCTTCCGCTTACGAA
GACGGTCGAGTTATGGTCCATGGCTGCAGGGGATCGTTACAGGAAAAAGA
CCTGACGCAGAGTACCAAAACGCCATGGAAATGGGAGAAGCTGTACGTTT
GTCGGGCTCACTCACAACCGGTTCTGTCGCTTCACGTTTCGCCTGCTGGC
AATTACTTCTTCTCTTCATCAGCCGATGCGGTGCTGGCGAAGCATCCTAT
TCCTTCGCTGGGTAGCCCAGGACATGCCCCGGAAGAGTTGCCGATCAGGT
CGATTAACACGAAGCATGCGGGCCAGCAAGGTGTGCGGATACGGTCTGAT
GGGAAGATTTTCGCGACTGCCGGGTGGGACTCCAGGGTCAGGGTCTACTC
GTGCAAGACGATGAAAGAACTAGCCGTCTTGAAGTGGCATAAAGATGGAT
GCTACGCTGTAGCGTTTGCGGATGTTGATGTATTTGAAGTACGCGAGAAA
TCGGATGAGGAGAAGCCTACGGTTTCGCCTAACGACAATGGCAATCAAGA
AAACCAGCTTGCCGGACGGGCAGAAACTGAATTCTCGCTTGCAACAGTGC
ATCGCCAAAGATACGAGAAGGTGCAAAACACCCATTGGTTAGCTGCTGGG
TCAAAGGACGGAAAAATCTCATTGTGGGATATCTATTGAATGAGCGCACA
ATCCCCGCAGGTGCGGCAACCACCGGCAACCCCCACTTACATTTTACGCG
GTCATGCCGCTGCCATCCACGCGCTACAGATATTCCACCAAAACCTAAGG
CTCGTTTCAGGAGACGCAGACGGATGGATTGTCGTATGGGACCTAGTCTC
AAAGCGCCCTCGAGCGACATGGAAGGCCCATGACGGCGCTGTTCTTGAAG
TCAAAGGTTTTAGCTTCGGAAATGGTGCTGTTACAGAGGTGTTCAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | ASTRA complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:407937..409308 - |
|
