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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:498123..499610+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011396-T1 ID=KJC3_011396-T1|Name=KJC3_011396-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1488bp|location=Sequence derived from alignment at ch8:498123..499610+ (Aspergillus niger KJC3)
ATGTCGCTCTCAGCTTTGGGCACTCTAGTGGACATCCAGAGCCCGCCATT
AATAACGAGTCCTGCGGCGGCGGTGCGCAAGGATAAGCAAGGGATTGCTT
ATGCTCCATCGGACCATGAACTAGAAGGCCTTCAGCGACGCAGTCAACAG
ACCGCTGATATCTCCTCTCAGCAGACCCTGGGTTCGCAGACACCCGTGAG
CCCTGGTGAGTTGGAGAGCCATCCCACTTCGCCGGGAGAGGAAGCTGTGG
ACTCCATTCCCGCAATACAGAGTCCACCAATGACTAAATGGCGGCTGTTG
AGTGCCTGCTTGATGAACTTCGCCGGGGGACTGAACGACAGCGCACCTGG
GGCCCTCATCCCATACATGGAGAAAGACTACAATATTGGATATGCTATCG
TGTCGCTGATCTTTGTAACGAATGCGTTGGGATTCATTCTTGCTGCCCCT
TTGGTTCATGCGCTGGAAATGAAGCTTGGCCGGTCGAAGACTTATTCTTT
GTCAACAAGCTTGATAACCGCTGGTTATGTCATCATCATCTGCAAGCCAC
CCTTCCCTGCCGTCGTGGCCAGTTTCTTTCTATTAGGCCTCGGCATGGCC
ATCAACCTAGCCTTGAATAATGTCTTTTGCGCGAACCTTGTGAATAGCAC
TGCAGCCTTGGGTGGTCTCCATGGTGCTTATGGCTTGGGCGGCATCATAG
CACCACTTGTGGCGACGGCTTTGGCATCTCATGGGGTCCAATGGTCCTAC
TTCTACAGTATCAACCTCGCCATGTCGCTGATCAACCTGGTGTTCTCCGC
TTGGGCGTTCCAGAAATATGAAAAGGACTTCCCAACACAGTTATTGACGG
CGCTCCACCGTACCACTTCTCAGCAAACGCCTGGCCCAACCCAAGCGGCC
AGACCACACCTTCTGAAGCAAGCACTGAAGAGTCGACCCACTCTCCTTGG
GGCTCTATTTATCTTCGCCTACCAAGGGGCAGAAGTGTCGATTTCAGGCT
GGGTTGTCTCGTTCCTCATCAATTATCGTCATGGGGACCCCTCAAGGGTT
GGCTACGTTAGTGCCGGGTTCTGGGCTGGCATTACTGTTGGACGGTTCGT
CCTGTCGCATCCCGCCCACCTAGTCGGGGAGAAGCTATCCGTCATCCTAC
TGGTGCTCGGGTCAGTTGCCTTCCAGCTCATGACTTGGTTCATTCCCAAC
ATCATCGGGGACGCCGTGGCCGTGGCCGTAGTGGGTCTGCTACTGGGACC
AGTGTATCCTTGCGCCACGGTAGTGTTCAGCAAGCTACTGCCGCGCTCGA
TGCAGACGTCCAGTCTGAGCATTATCAGCGCCATGGGAAGCAGTGGGGGA
GCTGTGTCGCCGTTCTTCACCGGGCTTCTAGCTCAAACGGTGAGCACGTA
CGTCTTGCATCCGATATGCATTGGACTGTACGGTGTAATGCTCGTGGGGT
GGCTGTCTCTTCCTCGTATGTCGAAGAGATCCGAGTAA back to topCoding sequence (CDS) from alignment at ch8:498123..499610+ >KJC3_011396-T1 ID=KJC3_011396-T1|Name=KJC3_011396-T1|organism=Aspergillus niger KJC3|type=CDS|length=1488bp|location=Sequence derived from alignment at ch8:498123..499610+ (Aspergillus niger KJC3)
ATGTCGCTCTCAGCTTTGGGCACTCTAGTGGACATCCAGAGCCCGCCATT
AATAACGAGTCCTGCGGCGGCGGTGCGCAAGGATAAGCAAGGGATTGCTT
ATGCTCCATCGGACCATGAACTAGAAGGCCTTCAGCGACGCAGTCAACAG
ACCGCTGATATCTCCTCTCAGCAGACCCTGGGTTCGCAGACACCCGTGAG
CCCTGGTGAGTTGGAGAGCCATCCCACTTCGCCGGGAGAGGAAGCTGTGG
ACTCCATTCCCGCAATACAGAGTCCACCAATGACTAAATGGCGGCTGTTG
AGTGCCTGCTTGATGAACTTCGCCGGGGGACTGAACGACAGCGCACCTGG
GGCCCTCATCCCATACATGGAGAAAGACTACAATATTGGATATGCTATCG
TGTCGCTGATCTTTGTAACGAATGCGTTGGGATTCATTCTTGCTGCCCCT
TTGGTTCATGCGCTGGAAATGAAGCTTGGCCGGTCGAAGACTTATTCTTT
GTCAACAAGCTTGATAACCGCTGGTTATGTCATCATCATCTGCAAGCCAC
CCTTCCCTGCCGTCGTGGCCAGTTTCTTTCTATTAGGCCTCGGCATGGCC
ATCAACCTAGCCTTGAATAATGTCTTTTGCGCGAACCTTGTGAATAGCAC
TGCAGCCTTGGGTGGTCTCCATGGTGCTTATGGCTTGGGCGGCATCATAG
CACCACTTGTGGCGACGGCTTTGGCATCTCATGGGGTCCAATGGTCCTAC
TTCTACAGTATCAACCTCGCCATGTCGCTGATCAACCTGGTGTTCTCCGC
TTGGGCGTTCCAGAAATATGAAAAGGACTTCCCAACACAGTTATTGACGG
CGCTCCACCGTACCACTTCTCAGCAAACGCCTGGCCCAACCCAAGCGGCC
AGACCACACCTTCTGAAGCAAGCACTGAAGAGTCGACCCACTCTCCTTGG
GGCTCTATTTATCTTCGCCTACCAAGGGGCAGAAGTGTCGATTTCAGGCT
GGGTTGTCTCGTTCCTCATCAATTATCGTCATGGGGACCCCTCAAGGGTT
GGCTACGTTAGTGCCGGGTTCTGGGCTGGCATTACTGTTGGACGGTTCGT
CCTGTCGCATCCCGCCCACCTAGTCGGGGAGAAGCTATCCGTCATCCTAC
TGGTGCTCGGGTCAGTTGCCTTCCAGCTCATGACTTGGTTCATTCCCAAC
ATCATCGGGGACGCCGTGGCCGTGGCCGTAGTGGGTCTGCTACTGGGACC
AGTGTATCCTTGCGCCACGGTAGTGTTCAGCAAGCTACTGCCGCGCTCGA
TGCAGACGTCCAGTCTGAGCATTATCAGCGCCATGGGAAGCAGTGGGGGA
GCTGTGTCGCCGTTCTTCACCGGGCTTCTAGCTCAAACGGTGAGCACGTA
CGTCTTGCATCCGATATGCATTGGACTGTACGGTGTAATGCTCGTGGGGT
GGCTGTCTCTTCCTCGTATGTCGAAGAGATCCGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:498123..499610 + |
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