|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:518386..519384+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011402-T1 ID=KJC3_011402-T1|Name=KJC3_011402-T1|organism=Aspergillus niger KJC3|type=mRNA|length=999bp|location=Sequence derived from alignment at ch8:518386..519384+ (Aspergillus niger KJC3)
ATGGCGACCATAACAGCGCCCACCCCGATACCCCCCAACTGCACGTAAGT
CAATACATTCTCTCCCATCTCTTCTTCCTCCGAACCCGCATCGCAACAAA
CCCATATAGCAATAACATAAACTGACCACCAGCTCACAGAGTCTACGTAC
TACTCCCCCAGGGTTACCCCCTACTCACACCGCATCTCTAACACCTATGA
AACGAAATAGGTCCGCAACTTAGAAGAGCGCATCAAAGTCGACCAGCTAA
AAGAAGCCCTGGAAGAGATCTTCTCCGAATACGGCACGGTACTTGAAATC
GTCGCGAAAACGAACCTCAAGGCAAAAGGGCAGGCGTTTGTTGTGTTCGA
CACCGTGGAGGCGGCGACCCGCGCCATCGACGAAATCAATGGCTTCGAAC
TCTTCGACAAACCGATGGTGTTGGATTACGCGAAGACGAGAAGTGATATG
ACGGTGTTGCGTGAGGGCGGAGAGGATGAGCTAGAGGCGCATAAGAGACG
GAGGTTGGCTGAGAAGGGTATGCATATTTCCTTCTGTCTATTTTATCGGT
TTTGGTCCGGATGGGAAGGCTAATGTGTCATGTGGTTGGTGTTTGGTGTA
GAACGCAAACAAGCGCACGAAGCCCTCGAAGCTCAGAAAAAGCTCAAGCG
ACCCCCCGGTGCTCCTACGGAACCTGGCCGTCCTGCGAAAACCGCCAAGG
GCGCTGGTCTCAAGCCTACCAGTGGGGCTGCGGCGGCGGTTATTCCGGAC
GAGTATCTGCCCCCGAACAAGATTCTCTTCTTGCGCGACTTGCCCGATAC
TGCGGATCAGGACAGTCTGACGGCTGTGTTCGGTCGGTTCGAAGGATTCC
AGGAGGTTCGGTTGGTGCCCGGACGCAAGGGTATTGCGTTCGTCGAGTAC
GAGAACGAGTCTGGGGCTATCAGTGCCAAGGAGGCGACGTCGGGGATGCC
TATGGGAGAGGCTGGGAAGCCGATTCGGGTTACTTACCAGAGACAATGA back to topCoding sequence (CDS) from alignment at ch8:518386..519384+ >KJC3_011402-T1 ID=KJC3_011402-T1|Name=KJC3_011402-T1|organism=Aspergillus niger KJC3|type=CDS|length=3024bp|location=Sequence derived from alignment at ch8:518386..519384+ (Aspergillus niger KJC3)
ATGGCGACCATAACAGCGCCCACCCCGATACCCCCCAACTGCACAGTCTA
CGTCCGCAACTTAGAAGAGCGCATCAAAGTCGACCAGCTAAAAGAAGCCC
TGGAAGAGATCTTCTCCGAATACGGCACGGTACTTGAAATCGTCGCGAAA
ACGAACCTCAAGGCAAAAGGGCAGGCGTTTGTTGTGTTCGACACCGTGGA
GGCGGCGACCCGCGCCATCGACGAAATCAATGGCTTCGAACTCTTCGACA
AACCGATGGTGTTGGATTACGCGAAGACGAGAAGTGATATGACGGTGTTG
CGTGAGGGCGGAGAGGATGAGCTAGAGGCGCATAAGAGACGGAGGTTGGC
TGAGAAGGAACGCAAACAAGCGCACGAAGCCCTCGAAGCTCAGAAAAAGC
TCAAGCGACCCCCCGGTGCTCCTACGGAACCTGGCCGTCCTGCGAAAACC
GCCAAGGGCGCTGGTCTCAAGCCTACCAGTGGGGCTGCGGCGGCGGTTAT
TCCGGACGAGTATCTGCCCCCGAACAAGATTCTCTTCTTGCGCGACTTGC
CCGATACTGCGGATCAGGACAGTCTGACGGCTGTGTTCGGTCGGTTCGAA
GGATTCCAGGAGGTTCGGTTGGTGCCCGGACGCAAGGGTATTGCGTTCGT
CGAGTACGAGAACGAGTCTGGGGCTATCAGTGCCAAGGAGGCGACGTCGG
GGATGCCTATGGGAGAGGCTGGGAAGCCGATTCGGGTTACTTACCAGAGA
CAATGAATGGCGACCATAACAGCGCCCACCCCGATACCCCCCAACTGCAC
AGTCTACGTCCGCAACTTAGAAGAGCGCATCAAAGTCGACCAGCTAAAAG
AAGCCCTGGAAGAGATCTTCTCCGAATACGGCACGGTACTTGAAATCGTC
GCGAAAACGAACCTCAAGGCAAAAGGGCAGGCGTTTGTTGTGTTCGACAC
CGTGGAGGCGGCGACCCGCGCCATCGACGAAATCAATGGCTTCGAACTCT
TCGACAAACCGATGGTGTTGGATTACGCGAAGACGAGAAGTGATATGACG
GTGTTGCGTGAGGGCGGAGAGGATGAGCTAGAGGCGCATAAGAGACGGAG
GTTGGCTGAGAAGGAACGCAAACAAGCGCACGAAGCCCTCGAAGCTCAGA
AAAAGCTCAAGCGACCCCCCGGTGCTCCTACGGAACCTGGCCGTCCTGCG
AAAACCGCCAAGGGCGCTGGTCTCAAGCCTACCAGTGGGGCTGCGGCGGC
GGTTATTCCGGACGAGTATCTGCCCCCGAACAAGATTCTCTTCTTGCGCG
ACTTGCCCGATACTGCGGATCAGGACAGTCTGACGGCTGTGTTCGGTCGG
TTCGAAGGATTCCAGGAGGTTCGGTTGGTGCCCGGACGCAAGGGTATTGC
GTTCGTCGAGTACGAGAACGAGTCTGGGGCTATCAGTGCCAAGGAGGCGA
CGTCGGGGATGCCTATGGGAGAGGCTGGGAAGCCGATTCGGGTTACTTAC
CAGAGACAATGAATGGCGACCATAACAGCGCCCACCCCGATACCCCCCAA
CTGCACAGTCTACGTCCGCAACTTAGAAGAGCGCATCAAAGTCGACCAGC
TAAAAGAAGCCCTGGAAGAGATCTTCTCCGAATACGGCACGGTACTTGAA
ATCGTCGCGAAAACGAACCTCAAGGCAAAAGGGCAGGCGTTTGTTGTGTT
CGACACCGTGGAGGCGGCGACCCGCGCCATCGACGAAATCAATGGCTTCG
AACTCTTCGACAAACCGATGGTGTTGGATTACGCGAAGACGAGAAGTGAT
ATGACGGTGTTGCGTGAGGGCGGAGAGGATGAGCTAGAGGCGCATAAGAG
ACGGAGGTTGGCTGAGAAGGAACGCAAACAAGCGCACGAAGCCCTCGAAG
CTCAGAAAAAGCTCAAGCGACCCCCCGGTGCTCCTACGGAACCTGGCCGT
CCTGCGAAAACCGCCAAGGGCGCTGGTCTCAAGCCTACCAGTGGGGCTGC
GGCGGCGGTTATTCCGGACGAGTATCTGCCCCCGAACAAGATTCTCTTCT
TGCGCGACTTGCCCGATACTGCGGATCAGGACAGTCTGACGGCTGTGTTC
GGTCGGTTCGAAGGATTCCAGGAGGTTCGGTTGGTGCCCGGACGCAAGGG
TATTGCGTTCGTCGAGTACGAGAACGAGTCTGGGGCTATCAGTGCCAAGG
AGGCGACGTCGGGGATGCCTATGGGAGAGGCTGGGAAGCCGATTCGGGTT
ACTTACCAGAGACAATGAATGGCGACCATAACAGCGCCCACCCCGATACC
CCCCAACTGCACAGTCTACGTCCGCAACTTAGAAGAGCGCATCAAAGTCG
ACCAGCTAAAAGAAGCCCTGGAAGAGATCTTCTCCGAATACGGCACGGTA
CTTGAAATCGTCGCGAAAACGAACCTCAAGGCAAAAGGGCAGGCGTTTGT
TGTGTTCGACACCGTGGAGGCGGCGACCCGCGCCATCGACGAAATCAATG
GCTTCGAACTCTTCGACAAACCGATGGTGTTGGATTACGCGAAGACGAGA
AGTGATATGACGGTGTTGCGTGAGGGCGGAGAGGATGAGCTAGAGGCGCA
TAAGAGACGGAGGTTGGCTGAGAAGGAACGCAAACAAGCGCACGAAGCCC
TCGAAGCTCAGAAAAAGCTCAAGCGACCCCCCGGTGCTCCTACGGAACCT
GGCCGTCCTGCGAAAACCGCCAAGGGCGCTGGTCTCAAGCCTACCAGTGG
GGCTGCGGCGGCGGTTATTCCGGACGAGTATCTGCCCCCGAACAAGATTC
TCTTCTTGCGCGACTTGCCCGATACTGCGGATCAGGACAGTCTGACGGCT
GTGTTCGGTCGGTTCGAAGGATTCCAGGAGGTTCGGTTGGTGCCCGGACG
CAAGGGTATTGCGTTCGTCGAGTACGAGAACGAGTCTGGGGCTATCAGTG
CCAAGGAGGCGACGTCGGGGATGCCTATGGGAGAGGCTGGGAAGCCGATT
CGGGTTACTTACCAGAGACAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:518386..519384 + |
|
