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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:537742..540081- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011407-T1 ID=KJC3_011407-T1|Name=KJC3_011407-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2340bp|location=Sequence derived from alignment at ch8:537742..540081- (Aspergillus niger KJC3)
ATAGAGCTTTCCGCTTAAAATAGCTCAACAGCCATGCTCATCTGGGTTCT
GTAACAGTATACGCGCATATAAATATACATCACAAAAACCGCACTGCAGA
TACTAGCTCGGAGGCGGCAATAATTCCAGTCGTCCTCACCTAACTAAACT
TCCCCTTTGCCCGTATGTCCTATACAATCCTACCCTCCTCAACTTCATAG
TAGAACTAAATATCCATAGTTCCCAATATCATTACTCAATGACATTTTTG
ACATCTCCTGCCTCCAATTCAGCGAATCAGATCAACACATGGCATCATCA
CACCTCCTCCGCCATACCGACCCCGGCCCCCTAACCGTCAAACACTTCAT
CGACTCCTTCCAGCGCATATGGCTCGATTCACGAACAGCCCGAACAGGGC
GACATCATGTTTCTCATCTCCCACGGAGACTCGGTATGCCCTCTCCCATG
CATCCTTTCAATGTCAAACTAACACCAACCAGGTCTCGCCATAAGCGGAG
GCGCAGACTCTATGGCTCTCGCCTACCTCTGCAAACAATGGGAACGAACC
CAGACCCAAACGAGCGACGAGAAAGTTTCCGTCACTGCATTTGTCGTCGA
CCACAAAGCCCGTGAGGAAAGTACTCGCGAGGCGAACATGGTTGCCGGCT
GGCTTGATGACATGGGTATATCTATCCCCTACCCGTCACATCTACAAAAC
CGAATTGGAGTATACTAAATAAAGGTGCAGGCCTACAAACACAAATTCTC
CCCCTAACCTGGCCATCCCACCACATCTCCGCTTTTGAAACCCACGCCCG
CCGCCTCCGCTTCCAGGCCCTCGGCCAAGCCTGTCGAGCACATAGCATTG
AGACCCTCCTGATGGGACACCACCAAGATGACAACGTCGAAACGACCCTC
TGGCGCCTCTGCACGGGTGCCAGGGGCGCTGGCCTAGCGGGTATTCCAGC
AGTGACGCGCATTCCTGAATGCCATGGCTTGTTTGGGGTTGCGGAGAGTG
GATCCTCAATAACGTTACTAAAGCCAGGAATCAGTGACTATCGCATCAAA
ACAACTAATTCCAACGAGCTAAGACTTACGGAGTTATCATCCAACACCAC
ACAACACCAACAAACAAAATACAAAATAGCCACAGGCGGCATCTCCATAG
CCCGTCCCCTCCTCGCCTTCCCAAAACAAAACCTCCTCGCAACATGCAAA
GCAAACAACATCCCCTACGTCGAAGATCCAACAAACTTCGACCCAACTTT
GACTCCCCGAAACGCTATCCGGAGTCTCCTTGCGGAGAAGAAACTCCCTC
GTGCGCTGCGCGAAGAATCTATTCTTTCGCTAATGCGAAAGAGTAATATG
CTTCTGCGGTCAGTGACGCAGTCGTCGAATGAGATCCTTGATCGATGCGA
GCTTCTATCATTCGCTCCTGATACAGGGAGCATGATAGCCAGATTCCCTT
CACCACCACCACCATTATCAAATAAACCCAACTCAGCAGAAGAGAAGAAA
AATGATATCCCATCGCTCACCCTCCGACGCATCACGGAACTCATCTCCCC
GTTCCCGGAGAATCATTTCCCGCTGAGGAGTTTCGAGGCCTTTACTTCAC
GTGTTTTCCCTCCCTCTTCTTCAGGATTCCAGGGAGGAGAAGGCAGCATA
GCAAAACAGCAATCCTTCACGTTGGGTGGCGTTATGTTCCAACCTCTTCG
ATGCGATCTATCCTCAGCCTCTACCTCTACCAAAACTACTCCAGATATCA
CAAAAGAGGATGGAGGCTATGGAAATACATACCTTCTGACTCGCCAACCA
TACATGCGCAACCGACTTCCTATTCTTCCTATCACTGTTCCCATCGATTC
ATCCTCAACATCTTCCGAACATAGCACAACTAAATCTCAAGAAACTACCA
ATATGTCATCATCATCATTATCATCATCATCATCGGAATGGCGCCTCTGG
GATAACAGATACTGGTTCCGGGTCATGGGGACGAGCATATCACCTTCATC
GGGGGCAGCTCCGGAACCCACATCGCTATCGCTGATTGTGCGGCCACTAC
AAAAGTCTGATTTGAAGAACATCCGCACGGCAGCGTCAAAAGCGGAAATG
CGAGCGTTGATGGATCGGTTGGGGCGGGATGCGCCGGGATTAGTACGTTT
CACGGTGCCGTTGTTGGTATTGGTTGGAGATGGAGGGAAAGAGGTGCCGT
TGGCGTTGCCGACTATGGAGACGTGGTTGCCTGGAGCTGAAGACATGCTG
CAGTCAATGTCCTGTCATATCCGGTGGGAGTGGATGTATAAGATGATTGA
TCAGGAACCGTTGGAACGGATGGGTTGGTTGAAGAACTAG back to topCoding sequence (CDS) from alignment at ch8:537742..540081- >KJC3_011407-T1 ID=KJC3_011407-T1|Name=KJC3_011407-T1|organism=Aspergillus niger KJC3|type=CDS|length=5814bp|location=Sequence derived from alignment at ch8:537742..540081- (Aspergillus niger KJC3)
GCCTACAAACACAAATTCTCCCCCTAACCTGGCCATCCCACCACATCTCC
GCTTTTGAAACCCACGCCCGCCGCCTCCGCTTCCAGGCCCTCGGCCAAGC
CTGTCGAGCACATAGCATTGAGACCCTCCTGATGGGACACCACCAAGATG
ACAACGTCGAAACGACCCTCTGGCGCCTCTGCACGGGTGCCAGGGGCGCT
GGCCTAGCGGGTATTCCAGCAGTGACGCGCATTCCTGAATGCCATGGCTT
GTTTGGGGTTGCGGAGAGTGGATCCTCAATAACGTTACTAAAGCCAGGAA
TCAGTGACTATCGCATCAAAACAACTAATTCCAACGAGCTAAGACTTACG
GAGTTATCATCCAACACCACACAACACCAACAAACAAAATACAAAATAGC
CACAGGCGGCATCTCCATAGCCCGTCCCCTCCTCGCCTTCCCAAAACAAA
ACCTCCTCGCAACATGCAAAGCAAACAACATCCCCTACGTCGAAGATCCA
ACAAACTTCGACCCAACTTTGACTCCCCGAAACGCTATCCGGAGTCTCCT
TGCGGAGAAGAAACTCCCTCGTGCGCTGCGCGAAGAATCTATTCTTTCGC
TAATGCGAAAGAGTAATATGCTTCTGCGGTCAGTGACGCAGTCGTCGAAT
GAGATCCTTGATCGATGCGAGCTTCTATCATTCGCTCCTGATACAGGGAG
CATGATAGCCAGATTCCCTTCACCACCACCACCATTATCAAATAAACCCA
ACTCAGCAGAAGAGAAGAAAAATGATATCCCATCGCTCACCCTCCGACGC
ATCACGGAACTCATCTCCCCGTTCCCGGAGAATCATTTCCCGCTGAGGAG
TTTCGAGGCCTTTACTTCACGTGTTTTCCCTCCCTCTTCTTCAGGATTCC
AGGGAGGAGAAGGCAGCATAGCAAAACAGCAATCCTTCACGTTGGGTGGC
GTTATGTTCCAACCTCTTCGATGCGATCTATCCTCAGCCTCTACCTCTAC
CAAAACTACTCCAGATATCACAAAAGAGGATGGAGGCTATGGAAATACAT
ACCTTCTGACTCGCCAACCATACATGCGCAACCGACTTCCTATTCTTCCT
ATCACTGTTCCCATCGATTCATCCTCAACATCTTCCGAACATAGCACAAC
TAAATCTCAAGAAACTACCAATATGTCATCATCATCATTATCATCATCAT
CATCGGAATGGCGCCTCTGGGATAACAGATACTGGTTCCGGGTCATGGGG
ACGAGCATATCACCTTCATCGGGGGCAGCTCCGGAACCCACATCGCTATC
GCTGATTGTGCGGCCACTACAAAAGTCTGATTTGAAGAACATCCGCACGG
CAGCGTCAAAAGCGGAAATGCGAGCGTTGATGGATCGGTTGGGGCGGGAT
GCGCCGGGATTAGTACGTTTCACGGTGCCGTTGTTGGTATTGGTTGGAGA
TGGAGGGAAAGAGGTGCCGTTGGCGTTGCCGACTATGGAGACGTGGTTGC
CTGGAGCTGAAGACATGCTGCAGTCAATGTCCTGTCATATCCGGTGGGAG
TGGATGTATAAGATGATTGATCAGGAACCGTTGGAACGGATGGGTTGGTT
GAAGAACTAGGTCTCGCCATAAGCGGAGGCGCAGACTCTATGGCTCTCGC
CTACCTCTGCAAACAATGGGAACGAACCCAGACCCAAACGAGCGACGAGA
AAGTTTCCGTCACTGCATTTGTCGTCGACCACAAAGCCCGTGAGGAAAGT
ACTCGCGAGGCGAACATGGTTGCCGGCTGGCTTGATGACATGGATGGCAT
CATCACACCTCCTCCGCCATACCGACCCCGGCCCCCTAACCGTCAAACAC
TTCATCGACTCCTTCCAGCGCATATGGCTCGATTCACGAACAGCCCGAAC
AGGGCGACATCATGTTTCTCATCTCCCACGGAGACTCGGCCTACAAACAC
AAATTCTCCCCCTAACCTGGCCATCCCACCACATCTCCGCTTTTGAAACC
CACGCCCGCCGCCTCCGCTTCCAGGCCCTCGGCCAAGCCTGTCGAGCACA
TAGCATTGAGACCCTCCTGATGGGACACCACCAAGATGACAACGTCGAAA
CGACCCTCTGGCGCCTCTGCACGGGTGCCAGGGGCGCTGGCCTAGCGGGT
ATTCCAGCAGTGACGCGCATTCCTGAATGCCATGGCTTGTTTGGGGTTGC
GGAGAGTGGATCCTCAATAACGTTACTAAAGCCAGGAATCAGTGACTATC
GCATCAAAACAACTAATTCCAACGAGCTAAGACTTACGGAGTTATCATCC
AACACCACACAACACCAACAAACAAAATACAAAATAGCCACAGGCGGCAT
CTCCATAGCCCGTCCCCTCCTCGCCTTCCCAAAACAAAACCTCCTCGCAA
CATGCAAAGCAAACAACATCCCCTACGTCGAAGATCCAACAAACTTCGAC
CCAACTTTGACTCCCCGAAACGCTATCCGGAGTCTCCTTGCGGAGAAGAA
ACTCCCTCGTGCGCTGCGCGAAGAATCTATTCTTTCGCTAATGCGAAAGA
GTAATATGCTTCTGCGGTCAGTGACGCAGTCGTCGAATGAGATCCTTGAT
CGATGCGAGCTTCTATCATTCGCTCCTGATACAGGGAGCATGATAGCCAG
ATTCCCTTCACCACCACCACCATTATCAAATAAACCCAACTCAGCAGAAG
AGAAGAAAAATGATATCCCATCGCTCACCCTCCGACGCATCACGGAACTC
ATCTCCCCGTTCCCGGAGAATCATTTCCCGCTGAGGAGTTTCGAGGCCTT
TACTTCACGTGTTTTCCCTCCCTCTTCTTCAGGATTCCAGGGAGGAGAAG
GCAGCATAGCAAAACAGCAATCCTTCACGTTGGGTGGCGTTATGTTCCAA
CCTCTTCGATGCGATCTATCCTCAGCCTCTACCTCTACCAAAACTACTCC
AGATATCACAAAAGAGGATGGAGGCTATGGAAATACATACCTTCTGACTC
GCCAACCATACATGCGCAACCGACTTCCTATTCTTCCTATCACTGTTCCC
ATCGATTCATCCTCAACATCTTCCGAACATAGCACAACTAAATCTCAAGA
AACTACCAATATGTCATCATCATCATTATCATCATCATCATCGGAATGGC
GCCTCTGGGATAACAGATACTGGTTCCGGGTCATGGGGACGAGCATATCA
CCTTCATCGGGGGCAGCTCCGGAACCCACATCGCTATCGCTGATTGTGCG
GCCACTACAAAAGTCTGATTTGAAGAACATCCGCACGGCAGCGTCAAAAG
CGGAAATGCGAGCGTTGATGGATCGGTTGGGGCGGGATGCGCCGGGATTA
GTACGTTTCACGGTGCCGTTGTTGGTATTGGTTGGAGATGGAGGGAAAGA
GGTGCCGTTGGCGTTGCCGACTATGGAGACGTGGTTGCCTGGAGCTGAAG
ACATGCTGCAGTCAATGTCCTGTCATATCCGGTGGGAGTGGATGTATAAG
ATGATTGATCAGGAACCGTTGGAACGGATGGGTTGGTTGAAGAACTAGGT
CTCGCCATAAGCGGAGGCGCAGACTCTATGGCTCTCGCCTACCTCTGCAA
ACAATGGGAACGAACCCAGACCCAAACGAGCGACGAGAAAGTTTCCGTCA
CTGCATTTGTCGTCGACCACAAAGCCCGTGAGGAAAGTACTCGCGAGGCG
AACATGGTTGCCGGCTGGCTTGATGACATGGATGGCATCATCACACCTCC
TCCGCCATACCGACCCCGGCCCCCTAACCGTCAAACACTTCATCGACTCC
TTCCAGCGCATATGGCTCGATTCACGAACAGCCCGAACAGGGCGACATCA
TGTTTCTCATCTCCCACGGAGACTCGGCCTACAAACACAAATTCTCCCCC
TAACCTGGCCATCCCACCACATCTCCGCTTTTGAAACCCACGCCCGCCGC
CTCCGCTTCCAGGCCCTCGGCCAAGCCTGTCGAGCACATAGCATTGAGAC
CCTCCTGATGGGACACCACCAAGATGACAACGTCGAAACGACCCTCTGGC
GCCTCTGCACGGGTGCCAGGGGCGCTGGCCTAGCGGGTATTCCAGCAGTG
ACGCGCATTCCTGAATGCCATGGCTTGTTTGGGGTTGCGGAGAGTGGATC
CTCAATAACGTTACTAAAGCCAGGAATCAGTGACTATCGCATCAAAACAA
CTAATTCCAACGAGCTAAGACTTACGGAGTTATCATCCAACACCACACAA
CACCAACAAACAAAATACAAAATAGCCACAGGCGGCATCTCCATAGCCCG
TCCCCTCCTCGCCTTCCCAAAACAAAACCTCCTCGCAACATGCAAAGCAA
ACAACATCCCCTACGTCGAAGATCCAACAAACTTCGACCCAACTTTGACT
CCCCGAAACGCTATCCGGAGTCTCCTTGCGGAGAAGAAACTCCCTCGTGC
GCTGCGCGAAGAATCTATTCTTTCGCTAATGCGAAAGAGTAATATGCTTC
TGCGGTCAGTGACGCAGTCGTCGAATGAGATCCTTGATCGATGCGAGCTT
CTATCATTCGCTCCTGATACAGGGAGCATGATAGCCAGATTCCCTTCACC
ACCACCACCATTATCAAATAAACCCAACTCAGCAGAAGAGAAGAAAAATG
ATATCCCATCGCTCACCCTCCGACGCATCACGGAACTCATCTCCCCGTTC
CCGGAGAATCATTTCCCGCTGAGGAGTTTCGAGGCCTTTACTTCACGTGT
TTTCCCTCCCTCTTCTTCAGGATTCCAGGGAGGAGAAGGCAGCATAGCAA
AACAGCAATCCTTCACGTTGGGTGGCGTTATGTTCCAACCTCTTCGATGC
GATCTATCCTCAGCCTCTACCTCTACCAAAACTACTCCAGATATCACAAA
AGAGGATGGAGGCTATGGAAATACATACCTTCTGACTCGCCAACCATACA
TGCGCAACCGACTTCCTATTCTTCCTATCACTGTTCCCATCGATTCATCC
TCAACATCTTCCGAACATAGCACAACTAAATCTCAAGAAACTACCAATAT
GTCATCATCATCATTATCATCATCATCATCGGAATGGCGCCTCTGGGATA
ACAGATACTGGTTCCGGGTCATGGGGACGAGCATATCACCTTCATCGGGG
GCAGCTCCGGAACCCACATCGCTATCGCTGATTGTGCGGCCACTACAAAA
GTCTGATTTGAAGAACATCCGCACGGCAGCGTCAAAAGCGGAAATGCGAG
CGTTGATGGATCGGTTGGGGCGGGATGCGCCGGGATTAGTACGTTTCACG
GTGCCGTTGTTGGTATTGGTTGGAGATGGAGGGAAAGAGGTGCCGTTGGC
GTTGCCGACTATGGAGACGTGGTTGCCTGGAGCTGAAGACATGCTGCAGT
CAATGTCCTGTCATATCCGGTGGGAGTGGATGTATAAGATGATTGATCAG
GAACCGTTGGAACGGATGGGTTGGTTGAAGAACTAGGTCTCGCCATAAGC
GGAGGCGCAGACTCTATGGCTCTCGCCTACCTCTGCAAACAATGGGAACG
AACCCAGACCCAAACGAGCGACGAGAAAGTTTCCGTCACTGCATTTGTCG
TCGACCACAAAGCCCGTGAGGAAAGTACTCGCGAGGCGAACATGGTTGCC
GGCTGGCTTGATGACATGGATGGCATCATCACACCTCCTCCGCCATACCG
ACCCCGGCCCCCTAACCGTCAAACACTTCATCGACTCCTTCCAGCGCATA
TGGCTCGATTCACGAACAGCCCGAACAGGGCGACATCATGTTTCTCATCT
CCCACGGAGACTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008033 | tRNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016879 | ligase activity, forming carbon-nitrogen bonds |
| GO:0000166 | nucleotide binding |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012094 |
| DBxref | InterPro:IPR012795 |
| DBxref | InterPro:IPR011063 |
| DBxref | PFAM:PF01171 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:537742..540081 - |
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