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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:570476..572846+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011417-T1 ID=KJC3_011417-T1|Name=KJC3_011417-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2371bp|location=Sequence derived from alignment at ch8:570476..572846+ (Aspergillus niger KJC3)
CTTATTTCCAGAGACCAAAACGGAATGTCGCCGGTCCAACACCACTCCGT
GCCCGAGCCCAAGTCCGCCAATCTGACTCATTTGCCTAATTACCTGATGC
AGTTCGCCCCTCTCGTTTCATGAACCAACATCGAGAATCCCATCATGGCT
GCACCTGCTCCAAACGAAGCCAGAATAGCCACCAAGTCAGAGGATGAGGA
CGATGCCGACAGTCCTGCTCAGGCTCATGATGATCAGCATGGTACTAGCA
CAGAGGCTGGGCCTGACGCCCCAGAAACGGAGGCGAATCCAAACGCCATG
CACGGTTTCAAGCTTTTTGCCATTTTTGTGGGCATATGCTTTGGCGCGTT
CCTCATGTCCTTGGATATTTTCGTCATCGCAACCGTATTACTACCAGTCC
CTCGTGCTATTCCGATAAGATCCAACTGAAAATTATCTGACCCCCCGGAT
AGGCCATCCCATCTATCACGTCCGACTTCCACGATACCGCACAATTGGCC
TGGTATCCGGCTGCCTACTCGCTCACGACGTGCGCATTGACTCCGTTAGC
AGGAAAGCTAAGCTCATCATTTCCCCTCCGCTGGATCTACATATCGTTCT
TCTCTATATTTATGGTCGGCAGTTTTGTTTGTGGTTTCGCTCCCAACAGC
AACGCTTTCATTGTCGGTCGCGCAATTGCAGGTATCGGAGCATCAGGTGT
CGCAAGTGGCGGCTTCGTTATTGTGCTCACCGTTTCTCCCGAGAAATCGA
AACCATTGTTGTTAGGCATATGCAGCAGCTGCTTCGCTATGGGCCTAATT
CTAGCCCCTGTCATTGGCGGCGCTTTCACACAGGATACTACCTGGCGGTG
GTGTTTCTGGGTGAACCTTCCCCCCGGGGCGCTGACGCTGCTCTCTATGC
TCTTTTTGTTCAAACCTCCATCAATACAGCGCAATAAAACCGTTGCACAG
CGAATATTAGACCTGGACCTCATTGGGTGTGCCATTTTTGTTCCGGCAGT
CTTCATGCTGCTTCTTGCTATGATGTGGGGTGGTACGAAGGAGGCTTGGA
ACTCAGCGACAACAATCGGACTATTCGTGGGGTCCGGTGTGGCATTTATC
ATCTTCGTTTTATGGGAAGGCTATAAGGGCGAGAATGCAATGGTACCGGG
AAATGTGGTCGCCAGACGAACAGTCACATTCTGTGTCCTGTTTTCCTTCT
GCCACTTCGGCTCTGTCGGTATCCTGAACTACTATCTCCCAGAGTGGTTT
CAGGTCGTAGAAGGGGCCTCTCCATTGCAGAGTGGTACGCGGGTTTTAGC
CTCTGTGCTCTCCCAAATAGTTGGCACACTCTTTGCTGGGTTTCTAGGTA
TGCTTCTATACATATACTCACTCAGCCACGTCTTAGTTCTTGAAATATCC
ATGGATACAGAGATGCTGACATTGAGGAATTCGTACAGCACGGAAAGTCC
ACTACTACAATCCATGGCTCCATATCGGACCTCTCTTCATGTGCACCGCC
GCAGCCCTGTACACTCATTTCTCAGCATTCCACACCCCCTCCAGCCATTG
GATCGGGTTCCAAGTCATCCAGGGTCTTGGCGTCGGCATGGCTCAACAAA
TGCCATCACTCATTGTTCAGCACACTGTGCGTGACAAGCCAGAACTCATG
CCGGTCGCGATATCCCTGAATCTATTCTTTCAATACCTAGGCGCCACTAT
CATGCAGGCTCTTGGCGGTATTGTGTTTCGTTCTGTCCTATATCCCGAAT
TGGCAGATCATGCTGGCTTGAATTCCGAGCAGATTGCGTTGCTGTCTGCG
GGTGGGATGGCAGATGTGCGTAATACCGTGGAGGAGTACTTTCCGGATCT
TCTGCACTCGGTTCTGGAGGCGTATAATACCGCTATTACTTCGACTTTTG
TAAGTAGGCCTTCTTCTTCCGCGCTATTGTAGTGTGAGTGAGACTAACAG
ACATGAGCACAATAGTACGTTGCTGTTGGTACTACAGCTACGGCCTTCTT
CCTGGCTTTTGGAGCTAAGTGGGAGAGGATTACCGACAAACGGACGACTG
ATCCGGAGGGGGCCGAGACAGAACATAAGTAGAGCTATCAATACAACCCT
AATGGGTACAAAAAGAGGAGCCAGGAATGTCGTAGTGGAGATACAGAATA
TGGAGACGAAGATACAATGGGTTACGAAAACCTGAAGTATGTGAGAAACT
GTCAGGAAATTTTAAATGACCTACGGGCGTGGGCTAAAATGCAATCAGCA
CGTTGTTCTCAACTCCAACTCTGGAGGAAATGTATCATTATTTGGACTAT
ATAAGACGTATTACATTTATAATTCTTGGGATGGTGGGACAGTTGGTCTA
TCTACTATCGTAGCAAGTGGC back to topCoding sequence (CDS) from alignment at ch8:570476..572846+ >KJC3_011417-T1 ID=KJC3_011417-T1|Name=KJC3_011417-T1|organism=Aspergillus niger KJC3|type=CDS|length=6852bp|location=Sequence derived from alignment at ch8:570476..572846+ (Aspergillus niger KJC3)
ATGGCTGCACCTGCTCCAAACGAAGCCAGAATAGCCACCAAGTCAGAGGA
TGAGGACGATGCCGACAGTCCTGCTCAGGCTCATGATGATCAGCATGGTA
CTAGCACAGAGGCTGGGCCTGACGCCCCAGAAACGGAGGCGAATCCAAAC
GCCATGCACGGTTTCAAGCTTTTTGCCATTTTTGTGGGCATATGCTTTGG
CGCGTTCCTCATGTCCTTGGATATTTTCGTCATCGCAACCGCCATCCCAT
CTATCACGTCCGACTTCCACGATACCGCACAATTGGCCTGGTATCCGGCT
GCCTACTCGCTCACGACGTGCGCATTGACTCCGTTAGCAGGAAAGCTAAG
CTCATCATTTCCCCTCCGCTGGATCTACATATCGTTCTTCTCTATATTTA
TGGTCGGCAGTTTTGTTTGTGGTTTCGCTCCCAACAGCAACGCTTTCATT
GTCGGTCGCGCAATTGCAGGTATCGGAGCATCAGGTGTCGCAAGTGGCGG
CTTCGTTATTGTGCTCACCGTTTCTCCCGAGAAATCGAAACCATTGTTGT
TAGGCATATGCAGCAGCTGCTTCGCTATGGGCCTAATTCTAGCCCCTGTC
ATTGGCGGCGCTTTCACACAGGATACTACCTGGCGGTGGTGTTTCTGGGT
GAACCTTCCCCCCGGGGCGCTGACGCTGCTCTCTATGCTCTTTTTGTTCA
AACCTCCATCAATACAGCGCAATAAAACCGTTGCACAGCGAATATTAGAC
CTGGACCTCATTGGGTGTGCCATTTTTGTTCCGGCAGTCTTCATGCTGCT
TCTTGCTATGATGTGGGGTGGTACGAAGGAGGCTTGGAACTCAGCGACAA
CAATCGGACTATTCGTGGGGTCCGGTGTGGCATTTATCATCTTCGTTTTA
TGGGAAGGCTATAAGGGCGAGAATGCAATGGTACCGGGAAATGTGGTCGC
CAGACGAACAGTCACATTCTGTGTCCTGTTTTCCTTCTGCCACTTCGGCT
CTGTCGGTATCCTGAACTACTATCTCCCAGAGTGGTTTCAGGTCGTAGAA
GGGGCCTCTCCATTGCAGAGTGGTACGCGGGTTTTAGCCTCTGTGCTCTC
CCAAATAGTTGGCACACTCTTTGCTGGGTTTCTAGCACGGAAAGTCCACT
ACTACAATCCATGGCTCCATATCGGACCTCTCTTCATGTGCACCGCCGCA
GCCCTGTACACTCATTTCTCAGCATTCCACACCCCCTCCAGCCATTGGAT
CGGGTTCCAAGTCATCCAGGGTCTTGGCGTCGGCATGGCTCAACAAATGC
CATCACTCATTGTTCAGCACACTGTGCGTGACAAGCCAGAACTCATGCCG
GTCGCGATATCCCTGAATCTATTCTTTCAATACCTAGGCGCCACTATCAT
GCAGGCTCTTGGCGGTATTGTGTTTCGTTCTGTCCTATATCCCGAATTGG
CAGATCATGCTGGCTTGAATTCCGAGCAGATTGCGTTGCTGTCTGCGGGT
GGGATGGCAGATGTGCGTAATACCGTGGAGGAGTACTTTCCGGATCTTCT
GCACTCGGTTCTGGAGGCGTATAATACCGCTATTACTTCGACTTTTTACG
TTGCTGTTGGTACTACAGCTACGGCCTTCTTCCTGGCTTTTGGAGCTAAG
TGGGAGAGGATTACCGACAAACGGACGACTGATCCGGAGGGGGCCGAGAC
AGAACATAAGTAGATGGCTGCACCTGCTCCAAACGAAGCCAGAATAGCCA
CCAAGTCAGAGGATGAGGACGATGCCGACAGTCCTGCTCAGGCTCATGAT
GATCAGCATGGTACTAGCACAGAGGCTGGGCCTGACGCCCCAGAAACGGA
GGCGAATCCAAACGCCATGCACGGTTTCAAGCTTTTTGCCATTTTTGTGG
GCATATGCTTTGGCGCGTTCCTCATGTCCTTGGATATTTTCGTCATCGCA
ACCGCCATCCCATCTATCACGTCCGACTTCCACGATACCGCACAATTGGC
CTGGTATCCGGCTGCCTACTCGCTCACGACGTGCGCATTGACTCCGTTAG
CAGGAAAGCTAAGCTCATCATTTCCCCTCCGCTGGATCTACATATCGTTC
TTCTCTATATTTATGGTCGGCAGTTTTGTTTGTGGTTTCGCTCCCAACAG
CAACGCTTTCATTGTCGGTCGCGCAATTGCAGGTATCGGAGCATCAGGTG
TCGCAAGTGGCGGCTTCGTTATTGTGCTCACCGTTTCTCCCGAGAAATCG
AAACCATTGTTGTTAGGCATATGCAGCAGCTGCTTCGCTATGGGCCTAAT
TCTAGCCCCTGTCATTGGCGGCGCTTTCACACAGGATACTACCTGGCGGT
GGTGTTTCTGGGTGAACCTTCCCCCCGGGGCGCTGACGCTGCTCTCTATG
CTCTTTTTGTTCAAACCTCCATCAATACAGCGCAATAAAACCGTTGCACA
GCGAATATTAGACCTGGACCTCATTGGGTGTGCCATTTTTGTTCCGGCAG
TCTTCATGCTGCTTCTTGCTATGATGTGGGGTGGTACGAAGGAGGCTTGG
AACTCAGCGACAACAATCGGACTATTCGTGGGGTCCGGTGTGGCATTTAT
CATCTTCGTTTTATGGGAAGGCTATAAGGGCGAGAATGCAATGGTACCGG
GAAATGTGGTCGCCAGACGAACAGTCACATTCTGTGTCCTGTTTTCCTTC
TGCCACTTCGGCTCTGTCGGTATCCTGAACTACTATCTCCCAGAGTGGTT
TCAGGTCGTAGAAGGGGCCTCTCCATTGCAGAGTGGTACGCGGGTTTTAG
CCTCTGTGCTCTCCCAAATAGTTGGCACACTCTTTGCTGGGTTTCTAGCA
CGGAAAGTCCACTACTACAATCCATGGCTCCATATCGGACCTCTCTTCAT
GTGCACCGCCGCAGCCCTGTACACTCATTTCTCAGCATTCCACACCCCCT
CCAGCCATTGGATCGGGTTCCAAGTCATCCAGGGTCTTGGCGTCGGCATG
GCTCAACAAATGCCATCACTCATTGTTCAGCACACTGTGCGTGACAAGCC
AGAACTCATGCCGGTCGCGATATCCCTGAATCTATTCTTTCAATACCTAG
GCGCCACTATCATGCAGGCTCTTGGCGGTATTGTGTTTCGTTCTGTCCTA
TATCCCGAATTGGCAGATCATGCTGGCTTGAATTCCGAGCAGATTGCGTT
GCTGTCTGCGGGTGGGATGGCAGATGTGCGTAATACCGTGGAGGAGTACT
TTCCGGATCTTCTGCACTCGGTTCTGGAGGCGTATAATACCGCTATTACT
TCGACTTTTTACGTTGCTGTTGGTACTACAGCTACGGCCTTCTTCCTGGC
TTTTGGAGCTAAGTGGGAGAGGATTACCGACAAACGGACGACTGATCCGG
AGGGGGCCGAGACAGAACATAAGTAGATGGCTGCACCTGCTCCAAACGAA
GCCAGAATAGCCACCAAGTCAGAGGATGAGGACGATGCCGACAGTCCTGC
TCAGGCTCATGATGATCAGCATGGTACTAGCACAGAGGCTGGGCCTGACG
CCCCAGAAACGGAGGCGAATCCAAACGCCATGCACGGTTTCAAGCTTTTT
GCCATTTTTGTGGGCATATGCTTTGGCGCGTTCCTCATGTCCTTGGATAT
TTTCGTCATCGCAACCGCCATCCCATCTATCACGTCCGACTTCCACGATA
CCGCACAATTGGCCTGGTATCCGGCTGCCTACTCGCTCACGACGTGCGCA
TTGACTCCGTTAGCAGGAAAGCTAAGCTCATCATTTCCCCTCCGCTGGAT
CTACATATCGTTCTTCTCTATATTTATGGTCGGCAGTTTTGTTTGTGGTT
TCGCTCCCAACAGCAACGCTTTCATTGTCGGTCGCGCAATTGCAGGTATC
GGAGCATCAGGTGTCGCAAGTGGCGGCTTCGTTATTGTGCTCACCGTTTC
TCCCGAGAAATCGAAACCATTGTTGTTAGGCATATGCAGCAGCTGCTTCG
CTATGGGCCTAATTCTAGCCCCTGTCATTGGCGGCGCTTTCACACAGGAT
ACTACCTGGCGGTGGTGTTTCTGGGTGAACCTTCCCCCCGGGGCGCTGAC
GCTGCTCTCTATGCTCTTTTTGTTCAAACCTCCATCAATACAGCGCAATA
AAACCGTTGCACAGCGAATATTAGACCTGGACCTCATTGGGTGTGCCATT
TTTGTTCCGGCAGTCTTCATGCTGCTTCTTGCTATGATGTGGGGTGGTAC
GAAGGAGGCTTGGAACTCAGCGACAACAATCGGACTATTCGTGGGGTCCG
GTGTGGCATTTATCATCTTCGTTTTATGGGAAGGCTATAAGGGCGAGAAT
GCAATGGTACCGGGAAATGTGGTCGCCAGACGAACAGTCACATTCTGTGT
CCTGTTTTCCTTCTGCCACTTCGGCTCTGTCGGTATCCTGAACTACTATC
TCCCAGAGTGGTTTCAGGTCGTAGAAGGGGCCTCTCCATTGCAGAGTGGT
ACGCGGGTTTTAGCCTCTGTGCTCTCCCAAATAGTTGGCACACTCTTTGC
TGGGTTTCTAGCACGGAAAGTCCACTACTACAATCCATGGCTCCATATCG
GACCTCTCTTCATGTGCACCGCCGCAGCCCTGTACACTCATTTCTCAGCA
TTCCACACCCCCTCCAGCCATTGGATCGGGTTCCAAGTCATCCAGGGTCT
TGGCGTCGGCATGGCTCAACAAATGCCATCACTCATTGTTCAGCACACTG
TGCGTGACAAGCCAGAACTCATGCCGGTCGCGATATCCCTGAATCTATTC
TTTCAATACCTAGGCGCCACTATCATGCAGGCTCTTGGCGGTATTGTGTT
TCGTTCTGTCCTATATCCCGAATTGGCAGATCATGCTGGCTTGAATTCCG
AGCAGATTGCGTTGCTGTCTGCGGGTGGGATGGCAGATGTGCGTAATACC
GTGGAGGAGTACTTTCCGGATCTTCTGCACTCGGTTCTGGAGGCGTATAA
TACCGCTATTACTTCGACTTTTTACGTTGCTGTTGGTACTACAGCTACGG
CCTTCTTCCTGGCTTTTGGAGCTAAGTGGGAGAGGATTACCGACAAACGG
ACGACTGATCCGGAGGGGGCCGAGACAGAACATAAGTAGATGGCTGCACC
TGCTCCAAACGAAGCCAGAATAGCCACCAAGTCAGAGGATGAGGACGATG
CCGACAGTCCTGCTCAGGCTCATGATGATCAGCATGGTACTAGCACAGAG
GCTGGGCCTGACGCCCCAGAAACGGAGGCGAATCCAAACGCCATGCACGG
TTTCAAGCTTTTTGCCATTTTTGTGGGCATATGCTTTGGCGCGTTCCTCA
TGTCCTTGGATATTTTCGTCATCGCAACCGCCATCCCATCTATCACGTCC
GACTTCCACGATACCGCACAATTGGCCTGGTATCCGGCTGCCTACTCGCT
CACGACGTGCGCATTGACTCCGTTAGCAGGAAAGCTAAGCTCATCATTTC
CCCTCCGCTGGATCTACATATCGTTCTTCTCTATATTTATGGTCGGCAGT
TTTGTTTGTGGTTTCGCTCCCAACAGCAACGCTTTCATTGTCGGTCGCGC
AATTGCAGGTATCGGAGCATCAGGTGTCGCAAGTGGCGGCTTCGTTATTG
TGCTCACCGTTTCTCCCGAGAAATCGAAACCATTGTTGTTAGGCATATGC
AGCAGCTGCTTCGCTATGGGCCTAATTCTAGCCCCTGTCATTGGCGGCGC
TTTCACACAGGATACTACCTGGCGGTGGTGTTTCTGGGTGAACCTTCCCC
CCGGGGCGCTGACGCTGCTCTCTATGCTCTTTTTGTTCAAACCTCCATCA
ATACAGCGCAATAAAACCGTTGCACAGCGAATATTAGACCTGGACCTCAT
TGGGTGTGCCATTTTTGTTCCGGCAGTCTTCATGCTGCTTCTTGCTATGA
TGTGGGGTGGTACGAAGGAGGCTTGGAACTCAGCGACAACAATCGGACTA
TTCGTGGGGTCCGGTGTGGCATTTATCATCTTCGTTTTATGGGAAGGCTA
TAAGGGCGAGAATGCAATGGTACCGGGAAATGTGGTCGCCAGACGAACAG
TCACATTCTGTGTCCTGTTTTCCTTCTGCCACTTCGGCTCTGTCGGTATC
CTGAACTACTATCTCCCAGAGTGGTTTCAGGTCGTAGAAGGGGCCTCTCC
ATTGCAGAGTGGTACGCGGGTTTTAGCCTCTGTGCTCTCCCAAATAGTTG
GCACACTCTTTGCTGGGTTTCTAGCACGGAAAGTCCACTACTACAATCCA
TGGCTCCATATCGGACCTCTCTTCATGTGCACCGCCGCAGCCCTGTACAC
TCATTTCTCAGCATTCCACACCCCCTCCAGCCATTGGATCGGGTTCCAAG
TCATCCAGGGTCTTGGCGTCGGCATGGCTCAACAAATGCCATCACTCATT
GTTCAGCACACTGTGCGTGACAAGCCAGAACTCATGCCGGTCGCGATATC
CCTGAATCTATTCTTTCAATACCTAGGCGCCACTATCATGCAGGCTCTTG
GCGGTATTGTGTTTCGTTCTGTCCTATATCCCGAATTGGCAGATCATGCT
GGCTTGAATTCCGAGCAGATTGCGTTGCTGTCTGCGGGTGGGATGGCAGA
TGTGCGTAATACCGTGGAGGAGTACTTTCCGGATCTTCTGCACTCGGTTC
TGGAGGCGTATAATACCGCTATTACTTCGACTTTTTACGTTGCTGTTGGT
ACTACAGCTACGGCCTTCTTCCTGGCTTTTGGAGCTAAGTGGGAGAGGAT
TACCGACAAACGGACGACTGATCCGGAGGGGGCCGAGACAGAACATAAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011417-T1.utr5p1 | KJC3_011417-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011417-T1.utr3p1 | KJC3_011417-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.2 |
| Note | SMCOG1005: EmrB/QacA |
| Note | SMCOG1005:Drug resistance transporter |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF06609 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:570476..572846 + |
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