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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:573913..575429- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011418-T2 ID=KJC3_011418-T2|Name=KJC3_011418-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1517bp|location=Sequence derived from alignment at ch8:573913..575429- (Aspergillus niger KJC3)
GGCAATGTCTCAAGGCTCTCATCTAGGCTTACTTGGTGTCGCTGTCTGCA
GCACCATGCCGGCGTTCTCAAATGCCGCCCATCACACGGTGACTTTCTAA
ATGTCTCCTACTCACCGCTGCCGGAGTACGAAAGTCGCCACCGGCGACGT
CGTACTTCTACGGACGGCGATATAACATTATACCTGACATGCATGACAAG
AAGCACTTTGGTAAATCCCCAATGAACCAGGCGCTAAATCTATCGTAATG
GCTCTTCTCCAGTCTTTTGCAACACAAACCTGACGATCGCATCCAGAATC
ACACTGTGTATCCCGTTACCCAAAATGACAGTTACAAGTTCGTTATCCAT
CTAGCACTTCATCCTTTTCCTCCCAAGGAGGAAGCAATGATAAAGTCCCA
CTAACGTGGCAGCTCCATTTTGTCCCTCTTTATAGCAACGCCCGATGACT
GGAAAAAGAAAGCGTCAAGTTACAAATCCATGACCGGCGGCCTCAACGTG
AAACCCATTACTGTGATGCTAGAATGCCTGAACTCGCGCTTCCCACTCGC
CTCCGCTTCCGGAATCCTGGATGATGGGTGCGGGCCCGGTCCCATCATGA
CTCGGATTATTGAAGAGTTCGGGGATCATCTCCCGGCCGAATGTACCCTC
ATTTGCTCGGATTTTGCACCCGCCATGGTTGATCAGGTTCAGGAAGCGAA
AGCACGATTTGTGGCAGACCAGCCAGAATCGGTTTGGGGCCGTGTAAGAA
CCGAGGTCCTAGACTGTATGAATTTGGCTACTGTTGGCGATGGAGAGATG
AGCCATGTTGCGGCTGGTTGGGTATGTACTACCTACATTGACAATAAGCA
ATACCCAATCCTAGCATATTTTTGTTTTCCATTTCTACATGCTGATGTCA
TTGGGTTTGTTATACCCATTGCGAATACTAGTCCTTCTTCAACGCCAGCA
ACCCCCAAAAGGCCCTCTCTGAGTCGCTACGCGTCCTCCATCCCGGCGGT
GTGTTAGCTGCCTCATCGTGGGCCGAAACCGATTGGCTTAAGATCCTGCG
GACGATCACGAGGATTGACCCGGCCCGCAGCCCACCGTCTATTCCTGCGG
AGTGGGCTCACGCAGGCAAATTAGCCGCGCAGTTGGAGATTGCGGGATTC
CGCGACGTTGAGGTCCATGAGGTTGCTGTTGATATACCCTTCCGGTCATA
TGCGTCATTTGTGGATGTGATGATGACGAGAGTAACCCAGATGATCACGG
CAAGTCAGAACCTAGACGAGGAGCAGAAGGCTTCGTTGAGGGTGCTGATG
ATGGACGAGATGAGGGAGTTGTGTCCGACTGAGCCTGGAACCCTCAAGGC
TGTTTCTCTGGTTGCTGTTGGGGTGAAATAGCTGAATAAGTAGTTATGTT
CATTTCTCATCAAGGTCACTTCGTTAGGTTCCGTTGTTGTGAAATTACCT
AGTAGACAGCGATAGACGGCCCGAAAAAAAAAATAAAAAACAGAAAAACA
AAAAAGATGAAATAAAG back to topCoding sequence (CDS) from alignment at ch8:573913..575429- >KJC3_011418-T2 ID=KJC3_011418-T2|Name=KJC3_011418-T2|organism=Aspergillus niger KJC3|type=CDS|length=2547bp|location=Sequence derived from alignment at ch8:573913..575429- (Aspergillus niger KJC3)
TCCTTCTTCAACGCCAGCAACCCCCAAAAGGCCCTCTCTGAGTCGCTACG
CGTCCTCCATCCCGGCGGTGTGTTAGCTGCCTCATCGTGGGCCGAAACCG
ATTGGCTTAAGATCCTGCGGACGATCACGAGGATTGACCCGGCCCGCAGC
CCACCGTCTATTCCTGCGGAGTGGGCTCACGCAGGCAAATTAGCCGCGCA
GTTGGAGATTGCGGGATTCCGCGACGTTGAGGTCCATGAGGTTGCTGTTG
ATATACCCTTCCGGTCATATGCGTCATTTGTGGATGTGATGATGACGAGA
GTAACCCAGATGATCACGGCAAGTCAGAACCTAGACGAGGAGCAGAAGGC
TTCGTTGAGGGTGCTGATGATGGACGAGATGAGGGAGTTGTGTCCGACTG
AGCCTGGAACCCTCAAGGCTGTTTCTCTGGTTGCTGTTGGGGTGAAATAG
CAACGCCCGATGACTGGAAAAAGAAAGCGTCAAGTTACAAATCCATGACC
GGCGGCCTCAACGTGAAACCCATTACTGTGATGCTAGAATGCCTGAACTC
GCGCTTCCCACTCGCCTCCGCTTCCGGAATCCTGGATGATGGGTGCGGGC
CCGGTCCCATCATGACTCGGATTATTGAAGAGTTCGGGGATCATCTCCCG
GCCGAATGTACCCTCATTTGCTCGGATTTTGCACCCGCCATGGTTGATCA
GGTTCAGGAAGCGAAAGCACGATTTGTGGCAGACCAGCCAGAATCGGTTT
GGGGCCGTGTAAGAACCGAGGTCCTAGACTGTATGAATTTGGCTACTGTT
GGCGATGGAGAGATGAGCCATGTTGCGGCTGGTTGGATGACAGTTACAAT
CCTTCTTCAACGCCAGCAACCCCCAAAAGGCCCTCTCTGAGTCGCTACGC
GTCCTCCATCCCGGCGGTGTGTTAGCTGCCTCATCGTGGGCCGAAACCGA
TTGGCTTAAGATCCTGCGGACGATCACGAGGATTGACCCGGCCCGCAGCC
CACCGTCTATTCCTGCGGAGTGGGCTCACGCAGGCAAATTAGCCGCGCAG
TTGGAGATTGCGGGATTCCGCGACGTTGAGGTCCATGAGGTTGCTGTTGA
TATACCCTTCCGGTCATATGCGTCATTTGTGGATGTGATGATGACGAGAG
TAACCCAGATGATCACGGCAAGTCAGAACCTAGACGAGGAGCAGAAGGCT
TCGTTGAGGGTGCTGATGATGGACGAGATGAGGGAGTTGTGTCCGACTGA
GCCTGGAACCCTCAAGGCTGTTTCTCTGGTTGCTGTTGGGGTGAAATAGC
AACGCCCGATGACTGGAAAAAGAAAGCGTCAAGTTACAAATCCATGACCG
GCGGCCTCAACGTGAAACCCATTACTGTGATGCTAGAATGCCTGAACTCG
CGCTTCCCACTCGCCTCCGCTTCCGGAATCCTGGATGATGGGTGCGGGCC
CGGTCCCATCATGACTCGGATTATTGAAGAGTTCGGGGATCATCTCCCGG
CCGAATGTACCCTCATTTGCTCGGATTTTGCACCCGCCATGGTTGATCAG
GTTCAGGAAGCGAAAGCACGATTTGTGGCAGACCAGCCAGAATCGGTTTG
GGGCCGTGTAAGAACCGAGGTCCTAGACTGTATGAATTTGGCTACTGTTG
GCGATGGAGAGATGAGCCATGTTGCGGCTGGTTGGATGACAGTTACAATC
CTTCTTCAACGCCAGCAACCCCCAAAAGGCCCTCTCTGAGTCGCTACGCG
TCCTCCATCCCGGCGGTGTGTTAGCTGCCTCATCGTGGGCCGAAACCGAT
TGGCTTAAGATCCTGCGGACGATCACGAGGATTGACCCGGCCCGCAGCCC
ACCGTCTATTCCTGCGGAGTGGGCTCACGCAGGCAAATTAGCCGCGCAGT
TGGAGATTGCGGGATTCCGCGACGTTGAGGTCCATGAGGTTGCTGTTGAT
ATACCCTTCCGGTCATATGCGTCATTTGTGGATGTGATGATGACGAGAGT
AACCCAGATGATCACGGCAAGTCAGAACCTAGACGAGGAGCAGAAGGCTT
CGTTGAGGGTGCTGATGATGGACGAGATGAGGGAGTTGTGTCCGACTGAG
CCTGGAACCCTCAAGGCTGTTTCTCTGGTTGCTGTTGGGGTGAAATAGCA
ACGCCCGATGACTGGAAAAAGAAAGCGTCAAGTTACAAATCCATGACCGG
CGGCCTCAACGTGAAACCCATTACTGTGATGCTAGAATGCCTGAACTCGC
GCTTCCCACTCGCCTCCGCTTCCGGAATCCTGGATGATGGGTGCGGGCCC
GGTCCCATCATGACTCGGATTATTGAAGAGTTCGGGGATCATCTCCCGGC
CGAATGTACCCTCATTTGCTCGGATTTTGCACCCGCCATGGTTGATCAGG
TTCAGGAAGCGAAAGCACGATTTGTGGCAGACCAGCCAGAATCGGTTTGG
GGCCGTGTAAGAACCGAGGTCCTAGACTGTATGAATTTGGCTACTGTTGG
CGATGGAGAGATGAGCCATGTTGCGGCTGGTTGGATGACAGTTACAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011418-T2.utr3p1 | KJC3_011418-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011418-T2.utr5p1 | KJC3_011418-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.2 |
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR041698 |
| DBxref | PFAM:PF13649 |
| DBxref | PFAM:PF08241 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:573913..575429 - |
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