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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:614803..615990- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011432-T1 ID=KJC3_011432-T1|Name=KJC3_011432-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1188bp|location=Sequence derived from alignment at ch8:614803..615990- (Aspergillus niger KJC3)
CCTTGGAGTATCTTCAAGATATTCAGAAGGTATTCCCAAAACATGCAGAA
ATGGATTCCACGAAATATGTTTTCGGCCGCAATTATCGCGCCAGTGTCCG
GTGGGTGCCATGAATCTTCGTTTAATTGCCACACCAATCGCATTTGCTAA
CTTCCCGGGAAGATTAAATTACCAACACGCTCTCATTGCGAGCCTGACCG
ACCATCGATCCTTTCATCCTTCCATCCTCCGGGATATCACCAGCTCCACT
TCATTTCGCGTGGCTGATCTGGCTAGTGGCACCGCGTATGGGTTCTTCCT
GGCGTGTTCCATAGTTCTTCTCTTGGTTGACCGGTGCTATTAGACTTTGG
TCATCCGAAGTAGCTCGTGAATATCCACAATTCCAAGTCGATGGCTTCGA
TATCTCCTCCGACCAATACCCTTCCCCCTCCTGGAGACCCGAGAACCTAA
TTCTTCACGAACGGGACATATTACAACCTTTCCCGGAAGAATATCATGGG
GTGTACGATATAGTCAATGTGCGGTTCTTCATCACTCTTCTCAGCAAGGA
AAACCTATCCCTTTTTCTGACCAACATTTACGCCCTATTGAGTATGAAGA
TCTACCCCATCAATTTCCTCCCCTCCTTACCCACCTCCTAGTGCGAGCCG
ATGCTAATGGCAATAACCGTCTATTCAGAACCGGGAGGGTTTCTGCAATG
GCTTGACTTAGACCCTCGTAGCGCAAACGCCGTCGCATATCTGGAGGGCC
AAAAAAGCAACATCACCACAACAGGTCCCCATACCCATGATCCTGCCAAA
CCTAATTGCCAAACTAACACACACTTACATAGCCACAGACCACCCATACC
CACAAACCATGGCAGTTGCGAATCTGATGCGCAAGACCCCTCCAGACATC
GAAAGCTGGCTCACGGACAATCCTCATGAGATCCTCCAGCCATTCGGATT
TGAGCAAGTTGCCTGCGACAAACTCTCCCTGCCGGACATCTACCGCCCAC
TCTGGAATCAGTGTCTTCTCCTTGGCTTGGAAGAGTACTGCAGCAAAGTT
GAGGAGGACGCTGGCATGGATGCTGGTGCATCTCATGCAATGCGTGATAC
ACTTAACGGACTAAGCCGAGAATTCGGCGCGGGAACTAGTATTGATGTCC
ACTGGTTCTATCAGATCTCTAGGAAAATTGAATCTTGA back to topCoding sequence (CDS) from alignment at ch8:614803..615990- >KJC3_011432-T1 ID=KJC3_011432-T1|Name=KJC3_011432-T1|organism=Aspergillus niger KJC3|type=CDS|length=4335bp|location=Sequence derived from alignment at ch8:614803..615990- (Aspergillus niger KJC3)
ACCACCCATACCCACAAACCATGGCAGTTGCGAATCTGATGCGCAAGACC
CCTCCAGACATCGAAAGCTGGCTCACGGACAATCCTCATGAGATCCTCCA
GCCATTCGGATTTGAGCAAGTTGCCTGCGACAAACTCTCCCTGCCGGACA
TCTACCGCCCACTCTGGAATCAGTGTCTTCTCCTTGGCTTGGAAGAGTAC
TGCAGCAAAGTTGAGGAGGACGCTGGCATGGATGCTGGTGCATCTCATGC
AATGCGTGATACACTTAACGGACTAAGCCGAGAATTCGGCGCGGGAACTA
GTATTGATGTCCACTGGTTCTATCAGATCTCTAGGAAAATTGAATCTTGA
AACCGGGAGGGTTTCTGCAATGGCTTGACTTAGACCCTCGTAGCGCAAAC
GCCGTCGCATATCTGGAGGGCCAAAAAAGCAACATCACCACAACAGACTT
TGGTCATCCGAAGTAGCTCGTGAATATCCACAATTCCAAGTCGATGGCTT
CGATATCTCCTCCGACCAATACCCTTCCCCCTCCTGGAGACCCGAGAACC
TAATTCTTCACGAACGGGACATATTACAACCTTTCCCGGAAGAATATCAT
GGGGTGTACGATATAGTCAATGTGCGGTTCTTCATCACTCTTCTCAGCAA
GGAAAACCTATCCCTTTTTCTGACCAACATTTACGCCCTATTGAATTAAA
TTACCAACACGCTCTCATTGCGAGCCTGACCGACCATCGATCCTTTCATC
CTTCCATCCTCCGGGATATCACCAGCTCCACTTCATTTCGCGTGGCTGAT
CTGGCTAGTGGCACCGCATGGATTCCACGAAATATGTTTTCGGCCGCAAT
TATCGCGCCAGTGTCCGACCACCCATACCCACAAACCATGGCAGTTGCGA
ATCTGATGCGCAAGACCCCTCCAGACATCGAAAGCTGGCTCACGGACAAT
CCTCATGAGATCCTCCAGCCATTCGGATTTGAGCAAGTTGCCTGCGACAA
ACTCTCCCTGCCGGACATCTACCGCCCACTCTGGAATCAGTGTCTTCTCC
TTGGCTTGGAAGAGTACTGCAGCAAAGTTGAGGAGGACGCTGGCATGGAT
GCTGGTGCATCTCATGCAATGCGTGATACACTTAACGGACTAAGCCGAGA
ATTCGGCGCGGGAACTAGTATTGATGTCCACTGGTTCTATCAGATCTCTA
GGAAAATTGAATCTTGAAACCGGGAGGGTTTCTGCAATGGCTTGACTTAG
ACCCTCGTAGCGCAAACGCCGTCGCATATCTGGAGGGCCAAAAAAGCAAC
ATCACCACAACAGACTTTGGTCATCCGAAGTAGCTCGTGAATATCCACAA
TTCCAAGTCGATGGCTTCGATATCTCCTCCGACCAATACCCTTCCCCCTC
CTGGAGACCCGAGAACCTAATTCTTCACGAACGGGACATATTACAACCTT
TCCCGGAAGAATATCATGGGGTGTACGATATAGTCAATGTGCGGTTCTTC
ATCACTCTTCTCAGCAAGGAAAACCTATCCCTTTTTCTGACCAACATTTA
CGCCCTATTGAATTAAATTACCAACACGCTCTCATTGCGAGCCTGACCGA
CCATCGATCCTTTCATCCTTCCATCCTCCGGGATATCACCAGCTCCACTT
CATTTCGCGTGGCTGATCTGGCTAGTGGCACCGCATGGATTCCACGAAAT
ATGTTTTCGGCCGCAATTATCGCGCCAGTGTCCGACCACCCATACCCACA
AACCATGGCAGTTGCGAATCTGATGCGCAAGACCCCTCCAGACATCGAAA
GCTGGCTCACGGACAATCCTCATGAGATCCTCCAGCCATTCGGATTTGAG
CAAGTTGCCTGCGACAAACTCTCCCTGCCGGACATCTACCGCCCACTCTG
GAATCAGTGTCTTCTCCTTGGCTTGGAAGAGTACTGCAGCAAAGTTGAGG
AGGACGCTGGCATGGATGCTGGTGCATCTCATGCAATGCGTGATACACTT
AACGGACTAAGCCGAGAATTCGGCGCGGGAACTAGTATTGATGTCCACTG
GTTCTATCAGATCTCTAGGAAAATTGAATCTTGAAACCGGGAGGGTTTCT
GCAATGGCTTGACTTAGACCCTCGTAGCGCAAACGCCGTCGCATATCTGG
AGGGCCAAAAAAGCAACATCACCACAACAGACTTTGGTCATCCGAAGTAG
CTCGTGAATATCCACAATTCCAAGTCGATGGCTTCGATATCTCCTCCGAC
CAATACCCTTCCCCCTCCTGGAGACCCGAGAACCTAATTCTTCACGAACG
GGACATATTACAACCTTTCCCGGAAGAATATCATGGGGTGTACGATATAG
TCAATGTGCGGTTCTTCATCACTCTTCTCAGCAAGGAAAACCTATCCCTT
TTTCTGACCAACATTTACGCCCTATTGAATTAAATTACCAACACGCTCTC
ATTGCGAGCCTGACCGACCATCGATCCTTTCATCCTTCCATCCTCCGGGA
TATCACCAGCTCCACTTCATTTCGCGTGGCTGATCTGGCTAGTGGCACCG
CATGGATTCCACGAAATATGTTTTCGGCCGCAATTATCGCGCCAGTGTCC
GACCACCCATACCCACAAACCATGGCAGTTGCGAATCTGATGCGCAAGAC
CCCTCCAGACATCGAAAGCTGGCTCACGGACAATCCTCATGAGATCCTCC
AGCCATTCGGATTTGAGCAAGTTGCCTGCGACAAACTCTCCCTGCCGGAC
ATCTACCGCCCACTCTGGAATCAGTGTCTTCTCCTTGGCTTGGAAGAGTA
CTGCAGCAAAGTTGAGGAGGACGCTGGCATGGATGCTGGTGCATCTCATG
CAATGCGTGATACACTTAACGGACTAAGCCGAGAATTCGGCGCGGGAACT
AGTATTGATGTCCACTGGTTCTATCAGATCTCTAGGAAAATTGAATCTTG
AAACCGGGAGGGTTTCTGCAATGGCTTGACTTAGACCCTCGTAGCGCAAA
CGCCGTCGCATATCTGGAGGGCCAAAAAAGCAACATCACCACAACAGACT
TTGGTCATCCGAAGTAGCTCGTGAATATCCACAATTCCAAGTCGATGGCT
TCGATATCTCCTCCGACCAATACCCTTCCCCCTCCTGGAGACCCGAGAAC
CTAATTCTTCACGAACGGGACATATTACAACCTTTCCCGGAAGAATATCA
TGGGGTGTACGATATAGTCAATGTGCGGTTCTTCATCACTCTTCTCAGCA
AGGAAAACCTATCCCTTTTTCTGACCAACATTTACGCCCTATTGAATTAA
ATTACCAACACGCTCTCATTGCGAGCCTGACCGACCATCGATCCTTTCAT
CCTTCCATCCTCCGGGATATCACCAGCTCCACTTCATTTCGCGTGGCTGA
TCTGGCTAGTGGCACCGCATGGATTCCACGAAATATGTTTTCGGCCGCAA
TTATCGCGCCAGTGTCCGACCACCCATACCCACAAACCATGGCAGTTGCG
AATCTGATGCGCAAGACCCCTCCAGACATCGAAAGCTGGCTCACGGACAA
TCCTCATGAGATCCTCCAGCCATTCGGATTTGAGCAAGTTGCCTGCGACA
AACTCTCCCTGCCGGACATCTACCGCCCACTCTGGAATCAGTGTCTTCTC
CTTGGCTTGGAAGAGTACTGCAGCAAAGTTGAGGAGGACGCTGGCATGGA
TGCTGGTGCATCTCATGCAATGCGTGATACACTTAACGGACTAAGCCGAG
AATTCGGCGCGGGAACTAGTATTGATGTCCACTGGTTCTATCAGATCTCT
AGGAAAATTGAATCTTGAAACCGGGAGGGTTTCTGCAATGGCTTGACTTA
GACCCTCGTAGCGCAAACGCCGTCGCATATCTGGAGGGCCAAAAAAGCAA
CATCACCACAACAGACTTTGGTCATCCGAAGTAGCTCGTGAATATCCACA
ATTCCAAGTCGATGGCTTCGATATCTCCTCCGACCAATACCCTTCCCCCT
CCTGGAGACCCGAGAACCTAATTCTTCACGAACGGGACATATTACAACCT
TTCCCGGAAGAATATCATGGGGTGTACGATATAGTCAATGTGCGGTTCTT
CATCACTCTTCTCAGCAAGGAAAACCTATCCCTTTTTCTGACCAACATTT
ACGCCCTATTGAATTAAATTACCAACACGCTCTCATTGCGAGCCTGACCG
ACCATCGATCCTTTCATCCTTCCATCCTCCGGGATATCACCAGCTCCACT
TCATTTCGCGTGGCTGATCTGGCTAGTGGCACCGCATGGATTCCACGAAA
TATGTTTTCGGCCGCAATTATCGCGCCAGTGTCCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011432-T1.utr5p1 | KJC3_011432-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR041698 |
| DBxref | PFAM:PF13649 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:614803..615990 - |
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