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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:626652..629468+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011436-T2 ID=KJC3_011436-T2|Name=KJC3_011436-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2817bp|location=Sequence derived from alignment at ch8:626652..629468+ (Aspergillus niger KJC3)
GGAAATATGTCCAGTAAGCTTGCATTTCCTGCAGAGCCAACAGATATCAG
ACAACATGATCGGGGTACCTTCCGGTTGGCGCTGAATCACTCGGCGGTTA
TCATGGTTGAACTAAGAGGTGATGTTCCATGTCCGACACCTAAGCGCTTG
AATACCTCCTAGTCGCTCCTAAGGATAGGCTCTCGGCTTCCAAAATTATT
CTTCCGCAGTCCCTTGAGACACTATCATGCAATGGCCTTGCAGTCAAAGA
GCGCGCAAGGCTGATTCTGTTCCACCTGTCCTATGACGGAAGTACAAATC
CACCAACAATACGATTGTACCGCTCGCAGGGTGCTACTGTAGGCAATAGT
GTCAGCTGGTGCTTTACAGCTCCATGCATGGCTCTCAAGCTGAATATGCA
TACCGCGCCGCCGCTCTTACAGGCTGCCCCGTCCCAGCAGTATGGAACCC
CGTAATCACTTCGCATGCCAACGCACTCCCATATGTCTCGAGTATCGCAG
CCTTGTATGCAGCAACAAGGTATGACGTGTCAGTTGCGTCTCGGGACTGG
TCTTCATTCCCCGCAGTAGCATCGCAGTTTTGACATTGTTTATTACCTCC
TGTGATCCTAGATATGAAGGCGTCCTCCCGGACTTTCAGACATCAACACC
TTTACTTGTCAGCAAGCTGCCGACACAAGCATCGTCATGGGTAAGAAGGG
TTGCTCGAAGAAAAAAAACAAGGCAAGTAGCGTGACTTGGGCACAAGAGC
CTAGCACATCCCCGGAAGATGAAGTTCTTGTGACACGTCCAGAAGACGAG
ATGGCCGAGCAACCTACGGAGCCACCCGCTGAGGAATATTCTTCCCTTAA
TATCCCAGTGCTCAATGATTACAAGCAAGTGACTGAATGGTAAGCCACAT
CCATACCCGCATTCCACCTTCTCTATGCCTGTTCACCTGTATCCCAACTC
ACTGTGTACGTCGCTTGATGAAGCCATCTCTAACTTCAAGATATGTATAG
TCCCTACACCTCCCCCATCATCACTCTCAAGGTTCAAGACATGTACTACA
AGATTCCACAACATTACCTCCGGCCCTATAAGAGTTTGCTATTCGAACTA
AATTCTGTGCGCCGGGAGATCTTCGGTGACTACTATCATCATGAGCTGAA
CGTCCACCCAGAGGTTGCCCATACCTTTGTTCATTACCTGTACACTGAGC
AGTATGAGACACCTGAAACACAATTTGAACCCCCTCAGTCAGCGGACGAC
ATCCCCGCAATAACCAAAGCCCGCGATAGCATAGAGTTCCAGCGCGCAGT
CTACGCGTATCAGGCTGCCGCTCGGTACCAGATCCCGGGGCTACTGAGCA
TGGCACAAGGCTTTACGGCCCGATTCGCCGAGAGATTGTCAATAAACGAC
ATTCTGCGTGCTATAAGATGTGTATATGGCAGCCTGATTGCGGAGTATTC
TTGCCGCATGTGGCTTGAGGACTTTGTTCGAGACCAATTGAGTATCGCAT
TCAGCATCACAGATGGAAAGCTCAGACAGATCATCAAGGAGTATGAGGTT
GGACATAGTAGAAGCTTCGATCTTTTCCTTGTTGATGAAGTCCTGGCACT
CTACGAAAGGGAGCAAGACAGAGTAAATCATGTGAAAAGCTTGGACAATT
CAAGGAGAGAACACGACCCTATGCTTCAGCCTGAGCCTATGCTTGAGCCT
TACTGTGAGCCGGTGTGTGAGCCTGAGCCTTTGTGTAGGCCTCCATATAT
GGAGCCTTCCTTTGAGCCTCCGTGCGAGCCTGAGCCTGAGCCTGAGCCTG
AGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAACCTGCATATGAG
CCAGTGTGTGAGCCTGAGCCTGAGCCTGAGCCTGTGTATGAGCCGGTGTG
TGAGCCTCCGTATGAGGAGCCTTACCGTGAGCCTGAGCCTGAGCCTGTGT
ATGAGCCGGTGTGTGAGCCGGTGTGTGAGCCTCCGTATGAGGAGCCTTAC
CGTGAGCCTGCATGCGAGCCTGAGCCACTATTCAGATCCGTTGCAGAAGA
GGCAATACCAACTCCAGCTCCAGAACCGGAGCCAGAACCTATTCCTGAGC
CTGACTCCCTAGCTCCTGAGATACCAGATTGCCATCTCTATGACAACTGG
AACACACTCACCCAAAAGGACCGGAGGAAACGTGAGAGGTCTTTGATCAA
GATAGGGTTTCCTATCCCTGGTAAAGATTTCGAACTTCCTGTTCCGGATT
ATGAACCTCCTGCTGCAGAGCGTGAATCTTCTGCTGAACGGTCTGAACCT
CCTGCTGCAGAGCCTGAACCTCCTGAATTGGACGATGGTTGGGGATTTTC
GACCTCGGCCTCATCTAAGAAACGAAAGAATCTTGAGAGATTATCCGTCA
ACATGGGACATCCTATTCCGGGTAAGGATTGCAGTTTATCTATTTCAGCA
GATGAGTGCCCTCCTCGAGAGCGTGAACCTGAGCCTGAACCCGTCCCCAG
GTCAGGTTCATCTTCTGGGTCTTGGGAGATGCCAAACTCCATTAATCATA
GATGATTAAAGAGAGGATAATGCAGAATCTGCCAAACGAGAACAAATGAA
AAGGAGGGAAGGAGATAGATGATCCCGGGAATTTGAAGCATGGTTCAGCT
GAGCATAAGGGGCAGTAGGACTATCAGCATTGTCTGGATAATCTATAGTA
TCTGTTTGAGGTAGACCGGGAACTTAAGCCGCCTATTGTCGCTTCTGCTG
TTGTCATATTCGAACAAGAAGCCTAGTGAGGGTTTTACGAGACTGCCTAC
AATTATGATTTCCTGAG back to topCoding sequence (CDS) from alignment at ch8:626652..629468+ >KJC3_011436-T2 ID=KJC3_011436-T2|Name=KJC3_011436-T2|organism=Aspergillus niger KJC3|type=CDS|length=3288bp|location=Sequence derived from alignment at ch8:626652..629468+ (Aspergillus niger KJC3)
ATGGCCGAGCAACCTACGGAGCCACCCGCTGAGGAATATTCTTCCCTTAA
TATCCCAGTGCTCAATGATTACAAGCAAGTGACTGAATGTCCCTACACCT
CCCCCATCATCACTCTCAAGGTTCAAGACATGTACTACAAGATTCCACAA
CATTACCTCCGGCCCTATAAGAGTTTGCTATTCGAACTAAATTCTGTGCG
CCGGGAGATCTTCGGTGACTACTATCATCATGAGCTGAACGTCCACCCAG
AGGTTGCCCATACCTTTGTTCATTACCTGTACACTGAGCAGTATGAGACA
CCTGAAACACAATTTGAACCCCCTCAGTCAGCGGACGACATCCCCGCAAT
AACCAAAGCCCGCGATAGCATAGAGTTCCAGCGCGCAGTCTACGCGTATC
AGGCTGCCGCTCGGTACCAGATCCCGGGGCTACTGAGCATGGCACAAGGC
TTTACGGCCCGATTCGCCGAGAGATTGTCAATAAACGACATTCTGCGTGC
TATAAGATGTGTATATGGCAGCCTGATTGCGGAGTATTCTTGCCGCATGT
GGCTTGAGGACTTTGTTCGAGACCAATTGAGTATCGCATTCAGCATCACA
GATGGAAAGCTCAGACAGATCATCAAGGAGTATGAGGTTGGACATAGTAG
AAGCTTCGATCTTTTCCTTGTTGATGAAGTCCTGGCACTCTACGAAAGGG
AGCAAGACAGAGTAAATCATGTGAAAAGCTTGGACAATTCAAGGAGAGAA
CACGACCCTATGCTTCAGCCTGAGCCTATGCTTGAGCCTTACTGTGAGCC
GGTGTGTGAGCCTGAGCCTTTGTGTAGGCCTCCATATATGGAGCCTTCCT
TTGAGCCTCCGTGCGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCT
GAGCCTGAGCCTGAGCCTGAGCCTGAACCTGCATATGAGCCAGTGTGTGA
GCCTGAGCCTGAGCCTGAGCCTGTGTATGAGCCGGTGTGTGAGCCTCCGT
ATGAGGAGCCTTACCGTGAGCCTGAGCCTGAGCCTGTGTATGAGCCGGTG
TGTGAGCCGGTGTGTGAGCCTCCGTATGAGGAGCCTTACCGTGAGCCTGC
ATGCGAGCCTGAGCCACTATTCAGATCCGTTGCAGAAGAGGCAATACCAA
CTCCAGCTCCAGAACCGGAGCCAGAACCTATTCCTGAGCCTGACTCCCTA
GCTCCTGAGATACCAGATTGCCATCTCTATGACAACTGGAACACACTCAC
CCAAAAGGACCGGAGGAAACGTGAGAGGTCTTTGATCAAGATAGGGTTTC
CTATCCCTGGTAAAGATTTCGAACTTCCTGTTCCGGATTATGAACCTCCT
GCTGCAGAGCGTGAATCTTCTGCTGAACGGTCTGAACCTCCTGCTGCAGA
GCCTGAACCTCCTGAATTGGACGATGGTTGGGGATTTTCGACCTCGGCCT
CATCTAAGAAACGAAAGAATCTTGAGAGATTATCCGTCAACATGGGACAT
CCTATTCCGGGTAAGGATTGCAGTTTATCTATTTCAGCAGATGAGTGCCC
TCCTCGAGAGCGTGAACCTGAGCCTGAACCCGTCCCCAGGTCAGGTTCAT
CTTCTGGGTCTTGGGAGATGCCAAACTCCATTAATCATAGATGAATGGCC
GAGCAACCTACGGAGCCACCCGCTGAGGAATATTCTTCCCTTAATATCCC
AGTGCTCAATGATTACAAGCAAGTGACTGAATGTCCCTACACCTCCCCCA
TCATCACTCTCAAGGTTCAAGACATGTACTACAAGATTCCACAACATTAC
CTCCGGCCCTATAAGAGTTTGCTATTCGAACTAAATTCTGTGCGCCGGGA
GATCTTCGGTGACTACTATCATCATGAGCTGAACGTCCACCCAGAGGTTG
CCCATACCTTTGTTCATTACCTGTACACTGAGCAGTATGAGACACCTGAA
ACACAATTTGAACCCCCTCAGTCAGCGGACGACATCCCCGCAATAACCAA
AGCCCGCGATAGCATAGAGTTCCAGCGCGCAGTCTACGCGTATCAGGCTG
CCGCTCGGTACCAGATCCCGGGGCTACTGAGCATGGCACAAGGCTTTACG
GCCCGATTCGCCGAGAGATTGTCAATAAACGACATTCTGCGTGCTATAAG
ATGTGTATATGGCAGCCTGATTGCGGAGTATTCTTGCCGCATGTGGCTTG
AGGACTTTGTTCGAGACCAATTGAGTATCGCATTCAGCATCACAGATGGA
AAGCTCAGACAGATCATCAAGGAGTATGAGGTTGGACATAGTAGAAGCTT
CGATCTTTTCCTTGTTGATGAAGTCCTGGCACTCTACGAAAGGGAGCAAG
ACAGAGTAAATCATGTGAAAAGCTTGGACAATTCAAGGAGAGAACACGAC
CCTATGCTTCAGCCTGAGCCTATGCTTGAGCCTTACTGTGAGCCGGTGTG
TGAGCCTGAGCCTTTGTGTAGGCCTCCATATATGGAGCCTTCCTTTGAGC
CTCCGTGCGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCT
GAGCCTGAGCCTGAGCCTGAACCTGCATATGAGCCAGTGTGTGAGCCTGA
GCCTGAGCCTGAGCCTGTGTATGAGCCGGTGTGTGAGCCTCCGTATGAGG
AGCCTTACCGTGAGCCTGAGCCTGAGCCTGTGTATGAGCCGGTGTGTGAG
CCGGTGTGTGAGCCTCCGTATGAGGAGCCTTACCGTGAGCCTGCATGCGA
GCCTGAGCCACTATTCAGATCCGTTGCAGAAGAGGCAATACCAACTCCAG
CTCCAGAACCGGAGCCAGAACCTATTCCTGAGCCTGACTCCCTAGCTCCT
GAGATACCAGATTGCCATCTCTATGACAACTGGAACACACTCACCCAAAA
GGACCGGAGGAAACGTGAGAGGTCTTTGATCAAGATAGGGTTTCCTATCC
CTGGTAAAGATTTCGAACTTCCTGTTCCGGATTATGAACCTCCTGCTGCA
GAGCGTGAATCTTCTGCTGAACGGTCTGAACCTCCTGCTGCAGAGCCTGA
ACCTCCTGAATTGGACGATGGTTGGGGATTTTCGACCTCGGCCTCATCTA
AGAAACGAAAGAATCTTGAGAGATTATCCGTCAACATGGGACATCCTATT
CCGGGTAAGGATTGCAGTTTATCTATTTCAGCAGATGAGTGCCCTCCTCG
AGAGCGTGAACCTGAGCCTGAACCCGTCCCCAGGTCAGGTTCATCTTCTG
GGTCTTGGGAGATGCCAAACTCCATTAATCATAGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011436-T2.utr3p1 | KJC3_011436-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:626652..629468 + |
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