You are here

Home

KJC3_011441-T1, KJC3_011441-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011441-T1
Unique NameKJC3_011441-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:644336..645001+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011441-T1 ID=KJC3_011441-T1|Name=KJC3_011441-T1|organism=Aspergillus niger KJC3|type=mRNA|length=666bp|location=Sequence derived from alignment at ch8:644336..645001+ (Aspergillus niger KJC3)
ATGACCAAAACCCACCCACCATTTCCCCCTCCCTCTCAACCCACCAAAGA
ACCCCCCTCCGTCATCCAAACCATCCAAACCCTCGACCTCCACCCACATC
CTGAAGGCGGCTACTACCAGGAAACCTTCCGCCATCCACAAGAAATCCCC
GTAGCCAACGGCGCGGCAACTCGCTCCGCCGGTACCTGTATCCACTACTT
CCTCACGCCGGGGTCGCCGCTCGGTGCGTTCCACCGGAACAAGAGTCGGA
CTGTGCATACACTACATCGTGGACGGGGGAGATATGTGGTGATTCACGCG
GATGAGAAGAAGGATGGCAAGGCGCCAGTGGAGGAGTTTGTGGTGGGACA
TGGGGTGGAAAGAGGGGAGAAGGTGGAGTGGGTGGTTGAGGGGGGGAAGT
GGAAGGCGAGCTATTTGTTGCCTGAGGAGGGTCATGCCGATGACGATGGG
GAGGAGAGGGGGTTGTTGATTACTGAGGTAGGTTCTTTGCAACAAGACAA
TGTTCAAGATATAGATGGTTGACGATGTGTGTAGACAGTTGAGCCCGGGT
TCGCGATAGAGGATCATGACTTCTTGACGTTGCGGGAGATGAAGGAGCTC
CTCACTCCAGAACAAGTAGAGAAGTTGTCGTGGATGTTGAGGGAGAATTC
CATAGAGAAAAACTAA
back to top

Coding sequence (CDS) from alignment at ch8:644336..645001+

>KJC3_011441-T1 ID=KJC3_011441-T1|Name=KJC3_011441-T1|organism=Aspergillus niger KJC3|type=CDS|length=1218bp|location=Sequence derived from alignment at ch8:644336..645001+ (Aspergillus niger KJC3)
ATGACCAAAACCCACCCACCATTTCCCCCTCCCTCTCAACCCACCAAAGA
ACCCCCCTCCGTCATCCAAACCATCCAAACCCTCGACCTCCACCCACATC
CTGAAGGCGGCTACTACCAGGAAACCTTCCGCCATCCACAAGAAATCCCC
GTAGCCAACGGCGCGGCAACTCGCTCCGCCGGTACCTGTATCCACTACTT
CCTCACGCCGGGGTCGCCGCTCGGTGCGTTCCACCGGAACAAGAGTCGGA
CTGTGCATACACTACATCGTGGACGGGGGAGATATGTGGTGATTCACGCG
GATGAGAAGAAGGATGGCAAGGCGCCAGTGGAGGAGTTTGTGGTGGGACA
TGGGGTGGAAAGAGGGGAGAAGGTGGAGTGGGTGGTTGAGGGGGGGAAGT
GGAAGGCGAGCTATTTGTTGCCTGAGGAGGGTCATGCCGATGACGATGGG
GAGGAGAGGGGGTTGTTGATTACTGAGACAGTTGAGCCCGGGTTCGCGAT
AGAGGATCATGACTTCTTGACGTTGCGGGAGATGAAGGAGCTCCTCACTC
CAGAACAAGTAGAGAAGTTGTCGTGGATGTTGAGGGAGAATTCCATAGAG
AAAAACTAAATGACCAAAACCCACCCACCATTTCCCCCTCCCTCTCAACC
CACCAAAGAACCCCCCTCCGTCATCCAAACCATCCAAACCCTCGACCTCC
ACCCACATCCTGAAGGCGGCTACTACCAGGAAACCTTCCGCCATCCACAA
GAAATCCCCGTAGCCAACGGCGCGGCAACTCGCTCCGCCGGTACCTGTAT
CCACTACTTCCTCACGCCGGGGTCGCCGCTCGGTGCGTTCCACCGGAACA
AGAGTCGGACTGTGCATACACTACATCGTGGACGGGGGAGATATGTGGTG
ATTCACGCGGATGAGAAGAAGGATGGCAAGGCGCCAGTGGAGGAGTTTGT
GGTGGGACATGGGGTGGAAAGAGGGGAGAAGGTGGAGTGGGTGGTTGAGG
GGGGGAAGTGGAAGGCGAGCTATTTGTTGCCTGAGGAGGGTCATGCCGAT
GACGATGGGGAGGAGAGGGGGTTGTTGATTACTGAGACAGTTGAGCCCGG
GTTCGCGATAGAGGATCATGACTTCTTGACGTTGCGGGAGATGAAGGAGC
TCCTCACTCCAGAACAAGTAGAGAAGTTGTCGTGGATGTTGAGGGAGAAT
TCCATAGAGAAAAACTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011441KJC3_011441Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011441-T1.exon1KJC3_011441-T1.exon1Aspergillus niger KJC3exon
KJC3_011441-T1.exon2KJC3_011441-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011441-T1.cdsKJC3_011441-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011441-T1KJC3_011441-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011051
DBxrefInterPro:IPR014710
DBxrefInterPro:IPR009327
DBxrefPFAM:PF06172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:644336..645001 +
Powered by Drupal