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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:703880..709238- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011458-T2 ID=KJC3_011458-T2|Name=KJC3_011458-T2|organism=Aspergillus niger KJC3|type=mRNA|length=5359bp|location=Sequence derived from alignment at ch8:703880..709238- (Aspergillus niger KJC3)
TACGAATAACCCCGCACAACGCCAATTTCACCATGACGGCGAACAAGGAA
GCCGGTGCTGTCAAGGCAGCGGCGAAAAAGCCGGCCATGGCTGGAATCAG
CACTAAAGCTGAGAAGGAGGCCGATCTGGTTATGGGGGTAAGTTGCGATT
ACTATGGCGGAGTCCCACTATGCGCCTGGCGCAGACACAGACCACCCCAG
CGCCTACATTTCTTTCACTTTCCTGTGCTACATCTAACAATCCTAGACCA
ATAATAGTAGTATCGTATCTAAACGCAGCGTCGAAATGCTCTACTATCCC
AAGCCCCATTTCTTTCGGTATTTCGTCAAAAAGCCCCAGCGGCGGTCGCC
GTTGATCAACCGCGGATATTGGCTTCGTATGCATGCGATGGCAGAGTCGG
TGCGACAGTTTATGAGAGAGCCTACGGGAAAACCCAAGTTTGTCCTCAAC
TTGGGGTGTGGATTGTGAGTCGTAGCAAACCGGAAGCAACCGTTTGGTTG
CAGAGACTATTGGTACCTGGACCGTATGCTAAGACGGATTGTCGTAGTGA
TCCTCTACCGTTCATTCTCCTCAGTGAAGATCCATCCCTGTGTAGAGATA
CGCAATTCGTCGACATCGATTATGAGAAGCTCATGATCAATAAGAAGACC
GCCATCAAAAGGACCGCTGAGATCACACAGGTTCTCAAGGATGTAGAGTT
CTTGTCCGACGAAAGCGCCGTGCAAATACGGAGTGCACAATACCTAGGCA
TTGGATGCGATCTCAAAAATCTCAAAAAGCTGGACGACGTGCTGAGAACC
GAGGTTCTGCCTGCGGAGTGCTCAGTCCTCTTCCTAGCTGAGGTTTCCTT
GACCTATATGGATGTTAAGTCCGCCAATGCGGTTGTCGAGTGGGCGTCGA
AATTGAATAATGGTACGGTAACCATACTATGTGGCTTCCCTGGCTGATCG
CATGCATACTAACGTCAAATCTCATAGAGGCCAAGTTCTGCATTCTTGAG
CAGTTCTTCCCCGACGGGCCCGATCATCCGTTCGCCTCGACCATGATGAA
ACACTTTAAGAAGCTCGGAGCACCGCTGTATTCAATCCATGAATACCCTT
CACTCAACGAGCAAGAACAGCGATTCAGGAACGCCGGATGGCAGCAGGCA
AGCGCCAGAAGTTTGTGGGATCTCTGGTCGGATGACGAATTTGTGAGCAG
TTCGCTGCGATCCTCCTTGGATGCTGTGGAGCCGTTCGACGAATGGGAAG
AATTCGCACTTTTTGCTTCCCATTACTTCCTTCTCGTCGCCTCTACGTCA
CAAGGGGGTTTGGATCGCAGCGCAGCAAAGACTATGCAGGCCGAACAGGA
AGTCGATGTGTCCAACCAGTACGCGCTTCTTGCAAAGTACCCGGCGGGGG
GTGGCCAACGCAGGTTCGGAGCGCTTATTCCGGATGGCACAAACTCTTTC
GGTTACCATGCCGGGCTCGGACGGCAGACGCGACTAGCAACGACGGATCT
GTACGCGAACACAAACGACGTCACCGGCCCTACCCTGCCTGTCCCTTCCC
GCGATGTCCCAGCGAGGATGTGTCATACCGTAACACAGCTATCTGGTGGC
GATTGTTTACTTGTCGGTGGCCGGGCTTCACCAGCTGCTGGTCTCAAGGA
TTGCTGGCTAAGACAGGGAACCCAGTGGCGTCCGACACATAACCTCCCAG
TCGAGCGGTTCAGACATAGTGCGATCAGAGTCACTTTGAGCTCAGACTAT
GTCTTGGTCTATGGAGGAAAAACAAGCAATGGCACGACCCTGGATACCTG
GTTGCTATGGAGCAAAGAAGACGGGTGGCAAACAGTTGAAACGGTCAATG
GAAGCCCCAGTGCTAGGTTCGGGGCCTGCCTGGCAAGCACAGACAATACG
TCGGGAATCCTTTTCGGAGGAATTGGAGCGGATGGCATTATCGTGGAAGA
TTTCTGGACGTGGAAGTTGCACCAGCGCAGCAATGGATCGTACTATCTGG
AATTGCACGATGGCACAGAGAGGCTACAGAAAGCTTCACCCATATTTGAA
TATCTCAGCCGCTTCGGCGCCACTCTCAGCTGCTCCTCTCGGGGGTTGCT
TCTTATTGGCGGTATAATCCCTCGACAAATCGTGCCCTATGAGAAGGAAA
TCATGCTTCTGAATACGAAAGCACTTGTCGAGTGCCTTACTAGCGATTGT
GCGTCGCAGTCTGGTAATATATTGTCTGCAGTAGGGCTTGGTCTGAACTT
TGGTGGGCCAAGACCTTTACTGGTCGGCCATGCTGCTTATGCTATCGATC
CGAACCAGGTTCTGCTGCTGGGCGGTGGTGCAGTTTGTTTCTCTTTTGGA
ACCTTTTGGACTGAAGGCACCTGGCTTCTAAAGAACACTGACACAGCTCT
TGAGAACGAGTGGGGTCGAGTCTCTGAGATTGCGGAACCGTTGAAAGCTG
AGGAGCCATCGGTCGAGCCATCCAATGTGGACCAACAGAGCACCAAGGGC
GTCACACCGATTCCCCGTGTTAAGGTTGAAACCGCCGCGCAATTCCAACA
GATACTAGTGGAAGGGAAACCAGTAATCATCGAAGGATCCGACCTTGGTC
CGTGCACGGAGCGTTGGACAAAGGAGTATCTCGCGGATGCTGTTGGCAGG
GACCGCAAGGTAGAAGCCACCGACCCTGCTTGCCGTGAAGAAACTGGCTA
AGAGCCTCTCGATAGGTTGTTGTACATGACGCTCAGTCCGACCATATGAG
TTTCCAAGCGAAGAATTTCTCCTACACAACCAAGGAGTTCGGCTCCTTCC
TGGACGAGGTGCATGCGGGTGGCCGTCAATATCTTAGAAGTATCTCCACT
GAAGAGCCCACCAAACAACCTGCCAAGTTAGCCGTAGATTTCCCCAATCT
CAGGGATGATTTCCGACTCCCCGAGTCTTTTGCTATGGTTGTCGAGAACG
AACACAGTTCTCCACTCAGAATCTCTGGACCAGTCACCCTGTGGCTGCAC
TACGATGTGAGTGTGCATGTGAACAAATACATGCAGAAGTGAGGCACTGA
CTATTTCCAGGTCATGGCAAATGTTTTGTGTCAGATCCGTGGCGAGAAGA
GACTCATTCTCTTTCCCCCTAGTGATGTGCAATACCTTCAGGTCCCTGCT
GGGGCATCAAGCTCCACCCTTAACATATTCCAGAATTCAGTAGACGGTTC
AATTGCTTCGGTGCCGTACACAACGCCACATGAAGCGGTTATGCGTCGTG
GCGACATCCTGTTCATTCCCCCGTTGTGGTTACACACTGCATCTCCGACT
GGCCAGGTCAGTGTGGCCGTGAATGTTTTCTTTCGCAATTTATCGAAAGG
ATATGCAGCTGGCCGGGATGTCTACGGGAACCGTGATTTGCAAGCCTATG
AGAAAGCGAGGATCGATCTTCAGAAGATGGCGAAGTCTTTTGATGGCCTC
CCACCTGACATGGCTCGTTTCTACTTGCTGAGACTTGCAAAGGAGCTCAG
AGACAAGGCCGAAGCATAGATTATTGGAATGTCCAGCCTTGACCCGAAAA
CGTTGGGTTGGCCGGCTGGTATCAATCGCCAGTTGGCAGTCTATCAAACT
CGCCACGATATCTTTTTTGAGAGCAAGGTGGCACGACTTGTCTGACTCTC
AGAGCCTGGCCCTGTATTCAGAACTGCACATTCTGTTTGACCCCCTCAAC
AACTGACTGCCTCACGATGCAGGCAGGTTGCATGTGTGAAAGATCGGGCC
GCTTTTCAGCAAGGCGAGAGGCACGTGGTAGGAGAGTCAAGTAACACCGA
GTGAACGGGTGGGTGGTGGAGTAGGCAGAAGGAGCGATTTTGGGTGGGAG
GAGGGGCTGAGTTCTGCGGAGAGATACCCGGTTTAAGCTTGGCTTCCAGG
GAAAAGCCGAAGTGGGGACGAGATGGACACGCCCGTGCACTCACTGGTTT
GACACTTGGTTCGGGTTGGTTACAGCCAGCGCAACACGGTCGGGAGAACT
TAGCTGTGGCTGACCGATGCCCGATCTGCAGTAAGTAATACCGTAGAAGC
CATATCAATGGAAGATCAGAAGAAACTGGTGATACTGTGATAGGGATGAT
TGTTGCTGTTTACCTACCCAGTAGATTCAGGCGATAGCATGGAAAGCCTT
ACTGTATCCGGTCAACGTTGGATCGGCCTCAAGATACTTTAATTTTACGG
CTTATGGGACGATGCTTGTCCACAGACCCTCTCTCAGTGTCGCGTGCCTA
ATCTCAGGCATGTAGATGGCTCTGCATGGCAGTGAGCTGCACTTCGTAGA
ACCAGGGTGAGTGCGCTACATTATTACAACGCATACTACATGCAGGTCCC
CCACGAGACAGAATCATGTACATGAGCAAACAGGAAGTACAGTAGTACGC
AAAGAAGTCCAAAGAAGCAACAAAGTCTGTCTACTACAGCAAAGGGGCAG
AAAAGGCAAACAGCATTAAATTTTGGGGAAAAGTCAAAAGAAAGACATGC
ATACCAGGATGGTCACGCATATACCCAGGGGTACATCTGCACTAGGTGCA
ACAGCAATTGATGGGTTTGTAATGTAGATGTCATGTCGTTCAGATGAGTC
CGCAACCCCGGCTGTGGTTGGGTGATTAATTGGAGACGGGGGTGGGCAGA
CGCATGACTTGACAAGAACCACGGGTCCCTGTCAGCGACCGTTGTCAAAG
AGATCGATGGCGAGAAGGGTACGGGACGTGCGTGGATGCCAATCATAAAG
CCTGACCACCCAGACTGAGTTTGACGGACCTGCCACTGCTGTCCACCAAC
GACCTTTCATTCGGCAGAGCAGCGGTACCGCACCTTGCCTTGTGTCGCCG
TATCTGCGGTCCTAAGCCGGAAGGCCACTGCTTCAAGGCCCTATTGGGCG
TTACACTAGAGGTGTTGGCGTCAAGACTCCCGGGGGGTGTGGGGGTTTAA
TCCTGAGACGACCCGAGAGTATCGAAGCAGCCCAGCCTATTGTGTAGCAG
CGCACAGCATATTCAGGGCTGTAATCAGTGAGATTTGCCTGAGCGGGGGG
GTGGTTGAGCAGGAGAAGGGGAGGGTGGAATCATTGGCCGCAAACGGGCA
AGCTGTATTATCTATCTTATCCTAACACATCTTGGACAGGCCGGATGTGG
GGACCTTCTGCCCGAAATCAAGGTATGGCGGATGGTGACGACAAAGGTCG
GGCCAAGGTTCCTGCTATCTACCACACAGTAGATGATCGGGAGGGGCTGC
ATGAGAAGCAGATGAGACAAAAATCTGATTTCTGTAGAAGTGAAGTGGCA
GCAAGGACCATCACAATCAATTGGGATAGATTGGAAGATCGATGCACCGG
GATACTGCA back to topCoding sequence (CDS) from alignment at ch8:703880..709238- >KJC3_011458-T2 ID=KJC3_011458-T2|Name=KJC3_011458-T2|organism=Aspergillus niger KJC3|type=CDS|length=4008bp|location=Sequence derived from alignment at ch8:703880..709238- (Aspergillus niger KJC3)
AGGCCAAGTTCTGCATTCTTGAGCAGTTCTTCCCCGACGGGCCCGATCAT
CCGTTCGCCTCGACCATGATGAAACACTTTAAGAAGCTCGGAGCACCGCT
GTATTCAATCCATGAATACCCTTCACTCAACGAGCAAGAACAGCGATTCA
GGAACGCCGGATGGCAGCAGGCAAGCGCCAGAAGTTTGTGGGATCTCTGG
TCGGATGACGAATTTGTGAGCAGTTCGCTGCGATCCTCCTTGGATGCTGT
GGAGCCGTTCGACGAATGGGAAGAATTCGCACTTTTTGCTTCCCATTACT
TCCTTCTCGTCGCCTCTACGTCACAAGGGGGTTTGGATCGCAGCGCAGCA
AAGACTATGCAGGCCGAACAGGAAGTCGATGTGTCCAACCAGTACGCGCT
TCTTGCAAAGTACCCGGCGGGGGGTGGCCAACGCAGGTTCGGAGCGCTTA
TTCCGGATGGCACAAACTCTTTCGGTTACCATGCCGGGCTCGGACGGCAG
ACGCGACTAGCAACGACGGATCTGTACGCGAACACAAACGACGTCACCGG
CCCTACCCTGCCTGTCCCTTCCCGCGATGTCCCAGCGAGGATGTGTCATA
CCGTAACACAGCTATCTGGTGGCGATTGTTTACTTGTCGGTGGCCGGGCT
TCACCAGCTGCTGGTCTCAAGGATTGCTGGCTAAGACAGGGAACCCAGTG
GCGTCCGACACATAACCTCCCAGTCGAGCGGTTCAGACATAGTGCGATCA
GAGTCACTTTGAGCTCAGACTATGTCTTGGTCTATGGAGGAAAAACAAGC
AATGGCACGACCCTGGATACCTGGTTGCTATGGAGCAAAGAAGACGGGTG
GCAAACAGTTGAAACGGTCAATGGAAGCCCCAGTGCTAGGTTCGGGGCCT
GCCTGGCAAGCACAGACAATACGTCGGGAATCCTTTTCGGAGGAATTGGA
GCGGATGGCATTATCGTGGAAGATTTCTGGACGTGGAAGTTGCACCAGCG
CAGCAATGGATCGTACTATCTGGAATTGCACGATGGCACAGAGAGGCTAC
AGAAAGCTTCACCCATATTTGAATATCTCAGCCGCTTCGGCGCCACTCTC
AGCTGCTCCTCTCGGGGGTTGCTTCTTATTGGCGGTATAATCCCTCGACA
AATCGTGCCCTATGAGAAGGAAATCATGCTTCTGAATACGAAAGCACTTG
TCGAGTGCCTTACTAGCGATTGTGCGTCGCAGTCTGGTAATATATTGTCT
GCAGTAGGGCTTGGTCTGAACTTTGGTGGGCCAAGACCTTTACTGGTCGG
CCATGCTGCTTATGCTATCGATCCGAACCAGGTTCTGCTGCTGGGCGGTG
GTGCAGTTTGTTTCTCTTTTGGAACCTTTTGGACTGAAGGCACCTGGCTT
CTAAAGAACACTGACACAGCTCTTGAGAACGAGTGGGGTCGAGTCTCTGA
GATTGCGGAACCGTTGAAAGCTGAGGAGCCATCGGTCGAGCCATCCAATG
TGGACCAACAGAGCACCAAGGGCGTCACACCGATTCCCCGTGTTAAGGTT
GAAACCGCCGCGCAATTCCAACAGATACTAGTGGAAGGGAAACCAGTAAT
CATCGAAGGATCCGACCTTGGTCCGTGCACGGAGCGTTGGACAAAGGAGT
ATCTCGCGGATGCTGTTGGCAGGGACCGCAAGGTAGAAGCCACCGACCCT
GCTTGCCGTGAAGAAACTGGCTAAATGATCAATAAGAAGACCGCCATCAA
AAGGACCGCTGAGATCACACAGGTTCTCAAGGATGTAGAGTTCTTGTCCG
ACGAAAGCGCCGTGCAAATACGGAGTGCACAATACCTAGGCATTGGATGC
GATCTCAAAAATCTCAAAAAGCTGGACGACGTGCTGAGAACCGAGGTTCT
GCCTGCGGAGTGCTCAGTCCTCTTCCTAGCTGAGGTTTCCTTGACCTATA
TGGATGTTAAGTCCGCCAATGCGGTTGTCGAGTGGGCGTCGAAATTGAAT
AATGAGGCCAAGTTCTGCATTCTTGAGCAGTTCTTCCCCGACGGGCCCGA
TCATCCGTTCGCCTCGACCATGATGAAACACTTTAAGAAGCTCGGAGCAC
CGCTGTATTCAATCCATGAATACCCTTCACTCAACGAGCAAGAACAGCGA
TTCAGGAACGCCGGATGGCAGCAGGCAAGCGCCAGAAGTTTGTGGGATCT
CTGGTCGGATGACGAATTTGTGAGCAGTTCGCTGCGATCCTCCTTGGATG
CTGTGGAGCCGTTCGACGAATGGGAAGAATTCGCACTTTTTGCTTCCCAT
TACTTCCTTCTCGTCGCCTCTACGTCACAAGGGGGTTTGGATCGCAGCGC
AGCAAAGACTATGCAGGCCGAACAGGAAGTCGATGTGTCCAACCAGTACG
CGCTTCTTGCAAAGTACCCGGCGGGGGGTGGCCAACGCAGGTTCGGAGCG
CTTATTCCGGATGGCACAAACTCTTTCGGTTACCATGCCGGGCTCGGACG
GCAGACGCGACTAGCAACGACGGATCTGTACGCGAACACAAACGACGTCA
CCGGCCCTACCCTGCCTGTCCCTTCCCGCGATGTCCCAGCGAGGATGTGT
CATACCGTAACACAGCTATCTGGTGGCGATTGTTTACTTGTCGGTGGCCG
GGCTTCACCAGCTGCTGGTCTCAAGGATTGCTGGCTAAGACAGGGAACCC
AGTGGCGTCCGACACATAACCTCCCAGTCGAGCGGTTCAGACATAGTGCG
ATCAGAGTCACTTTGAGCTCAGACTATGTCTTGGTCTATGGAGGAAAAAC
AAGCAATGGCACGACCCTGGATACCTGGTTGCTATGGAGCAAAGAAGACG
GGTGGCAAACAGTTGAAACGGTCAATGGAAGCCCCAGTGCTAGGTTCGGG
GCCTGCCTGGCAAGCACAGACAATACGTCGGGAATCCTTTTCGGAGGAAT
TGGAGCGGATGGCATTATCGTGGAAGATTTCTGGACGTGGAAGTTGCACC
AGCGCAGCAATGGATCGTACTATCTGGAATTGCACGATGGCACAGAGAGG
CTACAGAAAGCTTCACCCATATTTGAATATCTCAGCCGCTTCGGCGCCAC
TCTCAGCTGCTCCTCTCGGGGGTTGCTTCTTATTGGCGGTATAATCCCTC
GACAAATCGTGCCCTATGAGAAGGAAATCATGCTTCTGAATACGAAAGCA
CTTGTCGAGTGCCTTACTAGCGATTGTGCGTCGCAGTCTGGTAATATATT
GTCTGCAGTAGGGCTTGGTCTGAACTTTGGTGGGCCAAGACCTTTACTGG
TCGGCCATGCTGCTTATGCTATCGATCCGAACCAGGTTCTGCTGCTGGGC
GGTGGTGCAGTTTGTTTCTCTTTTGGAACCTTTTGGACTGAAGGCACCTG
GCTTCTAAAGAACACTGACACAGCTCTTGAGAACGAGTGGGGTCGAGTCT
CTGAGATTGCGGAACCGTTGAAAGCTGAGGAGCCATCGGTCGAGCCATCC
AATGTGGACCAACAGAGCACCAAGGGCGTCACACCGATTCCCCGTGTTAA
GGTTGAAACCGCCGCGCAATTCCAACAGATACTAGTGGAAGGGAAACCAG
TAATCATCGAAGGATCCGACCTTGGTCCGTGCACGGAGCGTTGGACAAAG
GAGTATCTCGCGGATGCTGTTGGCAGGGACCGCAAGGTAGAAGCCACCGA
CCCTGCTTGCCGTGAAGAAACTGGCTAAATGATCAATAAGAAGACCGCCA
TCAAAAGGACCGCTGAGATCACACAGGTTCTCAAGGATGTAGAGTTCTTG
TCCGACGAAAGCGCCGTGCAAATACGGAGTGCACAATACCTAGGCATTGG
ATGCGATCTCAAAAATCTCAAAAAGCTGGACGACGTGCTGAGAACCGAGG
TTCTGCCTGCGGAGTGCTCAGTCCTCTTCCTAGCTGAGGTTTCCTTGACC
TATATGGATGTTAAGTCCGCCAATGCGGTTGTCGAGTGGGCGTCGAAATT
GAATAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011458-T2.utr3p1 | KJC3_011458-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011043 |
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR015915 |
| DBxref | PFAM:PF04072 |
| DBxref | PFAM:PF13854 |
| DBxref | PFAM:PF13418 |
| Product | variant 2 |
| Product | tRNA methyltransferase ppm2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:703880..709238 - |
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