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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:709384..711732+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011459-T1 ID=KJC3_011459-T1|Name=KJC3_011459-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2349bp|location=Sequence derived from alignment at ch8:709384..711732+ (Aspergillus niger KJC3)
CTCCGCTACCAACCAACCAAGTCGGCGTCACCTCGCGGTTGTGGAGGCGC
TCGGAGTATATATACGGCGAACCGTTACTCGAGTATCAGTTGCGCAAGCG
AGAGATGCAAATCAAGGCCCATCAACAGTGACGAAACCGGCTCTAACCAG
GGATCTGTCTAACCCCTCCATACCCGACACTAAAGCGTGTTACTCCTCCA
GACGACGTGATATCACCAAAGCTCATCTCGGAACTCTCGGTTTAATCATC
ACACGGCATACTGTACTGCCATATCGGTTCGATAGGAAAACAGAGTGGAG
TGAGGTGTGGTCGATCCCGGTGATCGACAGAGCAACGATGTCGATGAACT
TCGTGACGTTTAACCAGGACTATAGCTACCTAGCTGTGGGTAAGGCTCTT
CCTGCTCCCGTCTCTTACCTTCTATACTCGTGAAATATGTCTTGACACCT
GTCAGCGACTTCCAAGGGGTTTCGCATCTTCACCACGGACCCTTTCGCGA
AAAGCTATGAGACGAAGGAAGGGAATATTGCCATCATTGAGATGCTATTC
TCGACGTCCCTGGTTGCGCTGATCCTATCACCACGTCGCCTTCAAATAAC
TAATACCAAGGTTCGTAGGATGTCCTTCGCGCATGATGTTAGATTCTACC
TTTTCAATAATCGCATAACTTCTCCCCTGTATTCTGTTGCGCGATTCACG
AGGCGCAAATGGTTAACGCTTTTTCTCACATCTGCAACATATAGCGCCAA
TCCACGATATGCGAATTGACTTTTCCCACGACCGTGCTGGCAGTGAAGCT
GAACCGGAAACGGCTTGTCATTGTGCTGGAGGACCAGATTTACCTCTATG
ATATCCAGACAATGAAGCTCCTGTATACCATCGAGACCTCTCCCAATCCC
AACGGTAAGGCTGCGACTACATTTGGATGTGGATGTGCTAGATTGTCTAA
CTGCTGGCAGCACTATGTGCCCTCTCCCCGTCCTCCGATAACTGCTATCT
GGCATACCCTCTGCCGCAAAAGGCACCGCCCTCTACGTTCCAACCTCCAG
CTCACGCTCCTCCGGGGACGACTCATGTTACACCTACAAGTGGCGAGGTC
TTGATCTTTGATACTTTAAAGCTGGAAGCGATCAACGTTATTGAAGCGCA
TCGGTCTCCGCTAGCGTGCATCACGTTGAACAGTGATGGAACACTTATAG
CCACGGCATCGGACAAGGGAACTATCATACGGGTATTCTCTGTCCCCGAC
GGGCGCAAGCTTTACCAGTTCCGGCGAGGGTCGATACCATCCAGAATCTA
CAGCATGTCTTTCAACACCACCTCGACTCTCCTTTGTGTATCTTCTTCCA
CGGAAACGATCCACTTATTCAAATTAAGCCTTCAATCACAGTCACCGGAC
GCCACACCATCTTCTTCACTTACAGCCGCTGATCGAAGGTCCAGCCAAAG
CTCATTGGGACAATTATCTGACGCCGATGACAGGGTTGGAGATATGGGCT
CCTCCGAGCTTGCGTCGAGGAAACACAATGGAACTCTGATGGGCATGATC
CGGCGCACCTCACAAAATGTTGGCAGCACATTTGCTGCCAAGGTTGGAGG
CTACCTCCCCAAGGGAGTCAGCGAGATGTGGGAGCCCGCCCGAGACTTCG
CTTGGATCAAACTACCAAAATCTAACCCAGGGCCCGGAGCAAATGGGAAC
AACGGCCCGTTGCGCAGTGTGGTCGCTATGAGCGCCAACACTCCCCAGGT
TATGGTGGTGACTAGCGACGGCAACTTTTATGTGTTCAACATCGATCTCT
CCAAGGGTGGTGAGGGGACGTTGACTAAGCAATACTCGTGAGCCTGCTTT
CCCTATCAGTATAAAAAGACTGGTATTGACTGATAAATAGTGTGCTCGAT
ACAAATGACCGCCTGGGTTACTCCGTGATGGACTATTAATTTCGCCATGA
TACCACTCGTTTACGTCTACTACTCCTACATGTCGATCGTTACAGCGCCC
GTTGCATTTTATTTTGATTTGAAGCGTCTATAGTATACTTCTAATGAGGC
CATTGTACGCCTTCCTATTCGCCCTTACTTTATCGTTCAAGCCCTTCTTG
GGGCATTACTGCTACCAGTTCCTCAGTGTCAATTTTCTGAGCCCTCTACA
TCGCATGAGCATGACTTTCTGACCGTCTCAATGCTCTTGCCATGTAACCC
AAAATGTCTTGGGATCCAGGGTAACTTTGTGACGGAGGTCGTTTCCGCAT
TAACTGTCATGCAGTTTCTGATTTCCGAGCGCTGTACTATGTGGTTGTAC
TTTATGCATACGAACTTAGTCTGACACCCACACGACTCCTCCCCCTTAC back to topCoding sequence (CDS) from alignment at ch8:709384..711732+ >KJC3_011459-T1 ID=KJC3_011459-T1|Name=KJC3_011459-T1|organism=Aspergillus niger KJC3|type=CDS|length=6465bp|location=Sequence derived from alignment at ch8:709384..711732+ (Aspergillus niger KJC3)
ATGTCGATGAACTTCGTGACGTTTAACCAGGACTATAGCTACCTAGCTGT
GGCGACTTCCAAGGGGTTTCGCATCTTCACCACGGACCCTTTCGCGAAAA
GCTATGAGACGAAGGAAGGGAATATTGCCATCATTGAGATGCTATTCTCG
ACGTCCCTGGTTGCGCTGATCCTATCACCACGTCGCCTTCAAATAACTAA
TACCAAGCGCCAATCCACGATATGCGAATTGACTTTTCCCACGACCGTGC
TGGCAGTGAAGCTGAACCGGAAACGGCTTGTCATTGTGCTGGAGGACCAG
ATTTACCTCTATGATATCCAGACAATGAAGCTCCTGTATACCATCGAGAC
CTCTCCCAATCCCAACGCACTATGTGCCCTCTCCCCGTCCTCCGATAACT
GCTATCTGGCATACCCTCTGCCGCAAAAGGCACCGCCCTCTACGTTCCAA
CCTCCAGCTCACGCTCCTCCGGGGACGACTCATGTTACACCTACAAGTGG
CGAGGTCTTGATCTTTGATACTTTAAAGCTGGAAGCGATCAACGTTATTG
AAGCGCATCGGTCTCCGCTAGCGTGCATCACGTTGAACAGTGATGGAACA
CTTATAGCCACGGCATCGGACAAGGGAACTATCATACGGGTATTCTCTGT
CCCCGACGGGCGCAAGCTTTACCAGTTCCGGCGAGGGTCGATACCATCCA
GAATCTACAGCATGTCTTTCAACACCACCTCGACTCTCCTTTGTGTATCT
TCTTCCACGGAAACGATCCACTTATTCAAATTAAGCCTTCAATCACAGTC
ACCGGACGCCACACCATCTTCTTCACTTACAGCCGCTGATCGAAGGTCCA
GCCAAAGCTCATTGGGACAATTATCTGACGCCGATGACAGGGTTGGAGAT
ATGGGCTCCTCCGAGCTTGCGTCGAGGAAACACAATGGAACTCTGATGGG
CATGATCCGGCGCACCTCACAAAATGTTGGCAGCACATTTGCTGCCAAGG
TTGGAGGCTACCTCCCCAAGGGAGTCAGCGAGATGTGGGAGCCCGCCCGA
GACTTCGCTTGGATCAAACTACCAAAATCTAACCCAGGGCCCGGAGCAAA
TGGGAACAACGGCCCGTTGCGCAGTGTGGTCGCTATGAGCGCCAACACTC
CCCAGGTTATGGTGGTGACTAGCGACGGCAACTTTTATGTGTTCAACATC
GATCTCTCCAAGGGTGGTGAGGGGACGTTGACTAAGCAATACTCTGTGCT
CGATACAAATGACCGCCTGGGTTACTCCGTGATGGACTATTAAATGTCGA
TGAACTTCGTGACGTTTAACCAGGACTATAGCTACCTAGCTGTGGCGACT
TCCAAGGGGTTTCGCATCTTCACCACGGACCCTTTCGCGAAAAGCTATGA
GACGAAGGAAGGGAATATTGCCATCATTGAGATGCTATTCTCGACGTCCC
TGGTTGCGCTGATCCTATCACCACGTCGCCTTCAAATAACTAATACCAAG
CGCCAATCCACGATATGCGAATTGACTTTTCCCACGACCGTGCTGGCAGT
GAAGCTGAACCGGAAACGGCTTGTCATTGTGCTGGAGGACCAGATTTACC
TCTATGATATCCAGACAATGAAGCTCCTGTATACCATCGAGACCTCTCCC
AATCCCAACGCACTATGTGCCCTCTCCCCGTCCTCCGATAACTGCTATCT
GGCATACCCTCTGCCGCAAAAGGCACCGCCCTCTACGTTCCAACCTCCAG
CTCACGCTCCTCCGGGGACGACTCATGTTACACCTACAAGTGGCGAGGTC
TTGATCTTTGATACTTTAAAGCTGGAAGCGATCAACGTTATTGAAGCGCA
TCGGTCTCCGCTAGCGTGCATCACGTTGAACAGTGATGGAACACTTATAG
CCACGGCATCGGACAAGGGAACTATCATACGGGTATTCTCTGTCCCCGAC
GGGCGCAAGCTTTACCAGTTCCGGCGAGGGTCGATACCATCCAGAATCTA
CAGCATGTCTTTCAACACCACCTCGACTCTCCTTTGTGTATCTTCTTCCA
CGGAAACGATCCACTTATTCAAATTAAGCCTTCAATCACAGTCACCGGAC
GCCACACCATCTTCTTCACTTACAGCCGCTGATCGAAGGTCCAGCCAAAG
CTCATTGGGACAATTATCTGACGCCGATGACAGGGTTGGAGATATGGGCT
CCTCCGAGCTTGCGTCGAGGAAACACAATGGAACTCTGATGGGCATGATC
CGGCGCACCTCACAAAATGTTGGCAGCACATTTGCTGCCAAGGTTGGAGG
CTACCTCCCCAAGGGAGTCAGCGAGATGTGGGAGCCCGCCCGAGACTTCG
CTTGGATCAAACTACCAAAATCTAACCCAGGGCCCGGAGCAAATGGGAAC
AACGGCCCGTTGCGCAGTGTGGTCGCTATGAGCGCCAACACTCCCCAGGT
TATGGTGGTGACTAGCGACGGCAACTTTTATGTGTTCAACATCGATCTCT
CCAAGGGTGGTGAGGGGACGTTGACTAAGCAATACTCTGTGCTCGATACA
AATGACCGCCTGGGTTACTCCGTGATGGACTATTAAATGTCGATGAACTT
CGTGACGTTTAACCAGGACTATAGCTACCTAGCTGTGGCGACTTCCAAGG
GGTTTCGCATCTTCACCACGGACCCTTTCGCGAAAAGCTATGAGACGAAG
GAAGGGAATATTGCCATCATTGAGATGCTATTCTCGACGTCCCTGGTTGC
GCTGATCCTATCACCACGTCGCCTTCAAATAACTAATACCAAGCGCCAAT
CCACGATATGCGAATTGACTTTTCCCACGACCGTGCTGGCAGTGAAGCTG
AACCGGAAACGGCTTGTCATTGTGCTGGAGGACCAGATTTACCTCTATGA
TATCCAGACAATGAAGCTCCTGTATACCATCGAGACCTCTCCCAATCCCA
ACGCACTATGTGCCCTCTCCCCGTCCTCCGATAACTGCTATCTGGCATAC
CCTCTGCCGCAAAAGGCACCGCCCTCTACGTTCCAACCTCCAGCTCACGC
TCCTCCGGGGACGACTCATGTTACACCTACAAGTGGCGAGGTCTTGATCT
TTGATACTTTAAAGCTGGAAGCGATCAACGTTATTGAAGCGCATCGGTCT
CCGCTAGCGTGCATCACGTTGAACAGTGATGGAACACTTATAGCCACGGC
ATCGGACAAGGGAACTATCATACGGGTATTCTCTGTCCCCGACGGGCGCA
AGCTTTACCAGTTCCGGCGAGGGTCGATACCATCCAGAATCTACAGCATG
TCTTTCAACACCACCTCGACTCTCCTTTGTGTATCTTCTTCCACGGAAAC
GATCCACTTATTCAAATTAAGCCTTCAATCACAGTCACCGGACGCCACAC
CATCTTCTTCACTTACAGCCGCTGATCGAAGGTCCAGCCAAAGCTCATTG
GGACAATTATCTGACGCCGATGACAGGGTTGGAGATATGGGCTCCTCCGA
GCTTGCGTCGAGGAAACACAATGGAACTCTGATGGGCATGATCCGGCGCA
CCTCACAAAATGTTGGCAGCACATTTGCTGCCAAGGTTGGAGGCTACCTC
CCCAAGGGAGTCAGCGAGATGTGGGAGCCCGCCCGAGACTTCGCTTGGAT
CAAACTACCAAAATCTAACCCAGGGCCCGGAGCAAATGGGAACAACGGCC
CGTTGCGCAGTGTGGTCGCTATGAGCGCCAACACTCCCCAGGTTATGGTG
GTGACTAGCGACGGCAACTTTTATGTGTTCAACATCGATCTCTCCAAGGG
TGGTGAGGGGACGTTGACTAAGCAATACTCTGTGCTCGATACAAATGACC
GCCTGGGTTACTCCGTGATGGACTATTAAATGTCGATGAACTTCGTGACG
TTTAACCAGGACTATAGCTACCTAGCTGTGGCGACTTCCAAGGGGTTTCG
CATCTTCACCACGGACCCTTTCGCGAAAAGCTATGAGACGAAGGAAGGGA
ATATTGCCATCATTGAGATGCTATTCTCGACGTCCCTGGTTGCGCTGATC
CTATCACCACGTCGCCTTCAAATAACTAATACCAAGCGCCAATCCACGAT
ATGCGAATTGACTTTTCCCACGACCGTGCTGGCAGTGAAGCTGAACCGGA
AACGGCTTGTCATTGTGCTGGAGGACCAGATTTACCTCTATGATATCCAG
ACAATGAAGCTCCTGTATACCATCGAGACCTCTCCCAATCCCAACGCACT
ATGTGCCCTCTCCCCGTCCTCCGATAACTGCTATCTGGCATACCCTCTGC
CGCAAAAGGCACCGCCCTCTACGTTCCAACCTCCAGCTCACGCTCCTCCG
GGGACGACTCATGTTACACCTACAAGTGGCGAGGTCTTGATCTTTGATAC
TTTAAAGCTGGAAGCGATCAACGTTATTGAAGCGCATCGGTCTCCGCTAG
CGTGCATCACGTTGAACAGTGATGGAACACTTATAGCCACGGCATCGGAC
AAGGGAACTATCATACGGGTATTCTCTGTCCCCGACGGGCGCAAGCTTTA
CCAGTTCCGGCGAGGGTCGATACCATCCAGAATCTACAGCATGTCTTTCA
ACACCACCTCGACTCTCCTTTGTGTATCTTCTTCCACGGAAACGATCCAC
TTATTCAAATTAAGCCTTCAATCACAGTCACCGGACGCCACACCATCTTC
TTCACTTACAGCCGCTGATCGAAGGTCCAGCCAAAGCTCATTGGGACAAT
TATCTGACGCCGATGACAGGGTTGGAGATATGGGCTCCTCCGAGCTTGCG
TCGAGGAAACACAATGGAACTCTGATGGGCATGATCCGGCGCACCTCACA
AAATGTTGGCAGCACATTTGCTGCCAAGGTTGGAGGCTACCTCCCCAAGG
GAGTCAGCGAGATGTGGGAGCCCGCCCGAGACTTCGCTTGGATCAAACTA
CCAAAATCTAACCCAGGGCCCGGAGCAAATGGGAACAACGGCCCGTTGCG
CAGTGTGGTCGCTATGAGCGCCAACACTCCCCAGGTTATGGTGGTGACTA
GCGACGGCAACTTTTATGTGTTCAACATCGATCTCTCCAAGGGTGGTGAG
GGGACGTTGACTAAGCAATACTCTGTGCTCGATACAAATGACCGCCTGGG
TTACTCCGTGATGGACTATTAAATGTCGATGAACTTCGTGACGTTTAACC
AGGACTATAGCTACCTAGCTGTGGCGACTTCCAAGGGGTTTCGCATCTTC
ACCACGGACCCTTTCGCGAAAAGCTATGAGACGAAGGAAGGGAATATTGC
CATCATTGAGATGCTATTCTCGACGTCCCTGGTTGCGCTGATCCTATCAC
CACGTCGCCTTCAAATAACTAATACCAAGCGCCAATCCACGATATGCGAA
TTGACTTTTCCCACGACCGTGCTGGCAGTGAAGCTGAACCGGAAACGGCT
TGTCATTGTGCTGGAGGACCAGATTTACCTCTATGATATCCAGACAATGA
AGCTCCTGTATACCATCGAGACCTCTCCCAATCCCAACGCACTATGTGCC
CTCTCCCCGTCCTCCGATAACTGCTATCTGGCATACCCTCTGCCGCAAAA
GGCACCGCCCTCTACGTTCCAACCTCCAGCTCACGCTCCTCCGGGGACGA
CTCATGTTACACCTACAAGTGGCGAGGTCTTGATCTTTGATACTTTAAAG
CTGGAAGCGATCAACGTTATTGAAGCGCATCGGTCTCCGCTAGCGTGCAT
CACGTTGAACAGTGATGGAACACTTATAGCCACGGCATCGGACAAGGGAA
CTATCATACGGGTATTCTCTGTCCCCGACGGGCGCAAGCTTTACCAGTTC
CGGCGAGGGTCGATACCATCCAGAATCTACAGCATGTCTTTCAACACCAC
CTCGACTCTCCTTTGTGTATCTTCTTCCACGGAAACGATCCACTTATTCA
AATTAAGCCTTCAATCACAGTCACCGGACGCCACACCATCTTCTTCACTT
ACAGCCGCTGATCGAAGGTCCAGCCAAAGCTCATTGGGACAATTATCTGA
CGCCGATGACAGGGTTGGAGATATGGGCTCCTCCGAGCTTGCGTCGAGGA
AACACAATGGAACTCTGATGGGCATGATCCGGCGCACCTCACAAAATGTT
GGCAGCACATTTGCTGCCAAGGTTGGAGGCTACCTCCCCAAGGGAGTCAG
CGAGATGTGGGAGCCCGCCCGAGACTTCGCTTGGATCAAACTACCAAAAT
CTAACCCAGGGCCCGGAGCAAATGGGAACAACGGCCCGTTGCGCAGTGTG
GTCGCTATGAGCGCCAACACTCCCCAGGTTATGGTGGTGACTAGCGACGG
CAACTTTTATGTGTTCAACATCGATCTCTCCAAGGGTGGTGAGGGGACGT
TGACTAAGCAATACTCTGTGCTCGATACAAATGACCGCCTGGGTTACTCC
GTGATGGACTATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011459-T1.utr5p1 | KJC3_011459-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011459-T1.utr3p1 | KJC3_011459-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| Product | autophagy protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:709384..711732 + |
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