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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:729277..732945+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011467-T1 ID=KJC3_011467-T1|Name=KJC3_011467-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3669bp|location=Sequence derived from alignment at ch8:729277..732945+ (Aspergillus niger KJC3)
CGTCCAAAAAAGTAACTGAACTTACTTGCCTCCATCCACGCCCAGAGGCA
AAAAAAAAGGGAAGTAAAAAAAAAATAAAGGGAAAGCAAGTGGGAAAAGA
AAAAAAAAAAAAAGACACCACTCCCACCACAGCCTCTCCCTCCCACACCT
TCTTCTCATTCATCATCCTGCATCCTGTCAGCATTACCCTGTCTCTGCGA
CCGCAACGCACTTCTTTTACTCGTCCTTTTCCCTCCATGATTGCCTGTGT
GTCCTGTTGCTCGACCATCGCTTCGGAGGTCGTGGGTTGACGCAGCTCTC
TTTACTTACCTACCTATACCTAACCTACCTCTCTCTCTCTGACTACGACT
ACTTCAATCTCCACTCCCCCGGCGACCTTTTGACCTGTCTTCGGATTCCC
TCCGTCCTGCTTCCGACCGGTTTCTCTTATCAGTCCCTCCTCCCCGCCGA
TTTCTTTATTTCCTCCCAGAACCGGTATCATATCGCTCTTTGTATCCCAC
CCTACAATTGTCGGCTTCTTATACCCGGCCTGAAATGGTTCACTCTACGA
GCGAGGAACGCGCTGTACATTTGACACGGGAGGCTGTTGAGTTAATTGAT
GCTGGCCATCGTGAGGTACGTCTGGTCTCCTCGCTTTTTTTTTTCCTTTA
TCAGACCCCGCTGGGTTGTTATCATCCGTCGCCAGCATAGGTACCTTCGT
GCCATGTGACTAACCACTTGTTCGTGATGTCATTGCAGGCCGCCTCACGA
AATCTCCGAGAAGCTCTCTCCTTAGCTCCAGAACATCCGGCAGTCAAGGA
AGCTTTTGTGAAAATCCAGCAGGAAGAGGAGAATGGCCATCACCTGCTAG
ATCTCTGCCGACGCTATACCGGTGGCAAGGACGAGTCCGCGGGCAAAGAC
GCCGCCCTTTATCTCCGTACCGACGGACTCAAGCCTCCCGAGGAGGTTGC
ATTGGAATGTGTCAAGCTCCTGCTGGCGCAAAGGCCTCATGCCTTGTCGT
CGCTGCAGGATGACATTATCTCGGGGCTAGTCCGCCAGAACACCAGCGTG
CGGCGCTACTTCTCAGAGCAGCTCCAGGTGTCGGTGACCACGTTCTTCGA
TGAGATTTACGAAAGAGGCGACGGCGCTGCCGTATGCCTTGACACTGTGG
TCTTGGACCCTACTGTGTGGCCGTCCGAGGATGCTCGTCTACACTGTGAG
CGCGAGCTTTTCTTGCTCTTCATCGCCAAGCTCATGGAGTCGGGTCACGA
TATGGACGGTCGCTCCCTCAAAGGAATCGCGCGTTTGCTTGCCGTCGATG
CAGCGAAGCTGCAGGAGTTGGTCGACGATGAAGGACTGGACGTGATCCTG
TCCTCTTTGGACAGCCGGCTTCCCCTCGAGTGGAGGAGTCAAGCGACTCT
AGCAACCGTCAAGTACCTTGAAATCTCCAGGCAAGTTGGCGAGGAGAGGT
TCTCTCGGCTCGTAACTGCCAAGGTTGTCAAGGGTCGCAGCGATGATTTG
ATCGAGGCATTCTCGGCCACGGCTGCGGTCTTTCCCGTGATACCAGAAGT
CGCGGCCAACCTTTTCCTGTCGGAGAGCTACCTAGCGGCTTTGGCGCCTT
TGACCTCCAGAGACGCGAAGAGCCGCAAGGTCGAGCCCCATTTTCTGGAA
TTGTTGAATGCCGCGTGCATGAACAAGGCCTGTCGGGAAGCAATTTCAAA
GCACCTTTCGACCTGGCTTTCTCACCTTCTCACCAATGGCTGTGATGAGA
GCTCCGAGATGGCGGCGGTCATCTTGGCCAAGGTCCGTACTGCTGCCCAA
GTTGGTCCTTCGGACTCCAACGGCAAGGTAGAGGAAGATAACAGCCGGGT
TACCGAGCTGGTCGACCGCTTCAAGGATTTGATGTCGAAGCGTAAGACCG
AGAATCTGTCAAACGTGATCGAGGGCTTAGCCTATGCATCTGTAAAGGCC
ACCGTCAAGGAACAGCTCGCCAATGATGTGGCATTCTTACAGGATCTCAT
CAAGATTCTGCGCGAGAATTGCGCCGATTCTTCAGTGCTTTACGGTGGTC
TCATGATCATTGTAAACCTCACACAATTCCCACCCACTTTGACAGAAGAG
CAGAAGAAAATGTCCCAACTCAAGTCTTATGCCGAGGCCTCTCCTATCGG
GGCCCGAGCAAAGCCAGATCCCCTTGATGACGAGCAACATGTCATCGCAC
GTTGCAGTGCGCTCATCAAGGCAGGTGTCATGCCTCTTCTGGTAGATTGC
GGTAAGACAAATCTCTCCTCAGTGCAAGGTCTCATGGGAAAGATCGTCCT
TGCCCTGTCATGGGACCGAAAGTCTCGGGGAACCTTGGCACAGCAAGGTG
CTGTCAAATTCTTGCTCGTTATGGCAGCCGCGAAGCAGGGGATCCCGGGG
ACGAACGCCACCGAAGCGGTACAGAATGCATCCCAAGCACTCGCGCGAAT
TCTGATCTCCGTCAACCCGGTCCACGTGTTCCCCTCCTCTGGCTTCCCCC
AGATCACATCCGCTATCAGGCCTCTGACCGCGCTTCTGGTAAGCCCGGAG
ACGACTAGTCTGACGGCGGAACAACCGCGGAATCTTTTACCGGTCTTTGA
GAGTCTGCTTGCTCTAACGAACCTCGCCTCCCATCCAGACGAGACTGCTC
CTGAAGCTATCGTCCGCCAAGCCTGGCCCGTAGTAGAGGATCTCCTGCTC
TCCAGTAGTCCCATGGTTCAGCGAGCTGCCTGCGAGCTCATCTGCAATTT
GATGACGTGCGAGTCCGGCATCGTCAAATATGCCGATGGCTCTAAGCGCG
CGGCGCAACGGCTGCATGTGCTGTTGGCTCTCACCGATACGGACGATATG
GCAACCCGCAGCGCTGCTGGCGGAGCTCTTGCGATGCTGACCGAATTCGA
AGCAGCCATTGCCGGTATCCTGGAACGGCCGCGGGGTGTCCAGCTACTGC
TGGCCCTGTGCCAGGAAGAGGATGAAGGTTTAGTGCATCGCGGCGTAGCC
TGTGTGCGGAACTTGACCTGTCTCGCCACCGGAGATATTGGCCGGCGGGC
CAAGGAAGCCATTAAAGCAAACGGAGGAGTTAATATATTGAGCAATGTGC
TGAAGAAGACGAAGAACCCCGCGGTACTTCAAGTCGGGGTCGAAGCCTTG
AAGCCATTGGTCGAATAGATAGCCGACAACCGAGCGGCGTCCTTTGCTGG
GGTATCTCCCGGCGGTTAATACATCTCTATGATTCCTTTTGGGTGATTTG
GATTTGATTGTGATAGCGGGTCTTTTCGATTTGCAATTCATGGGCTGGGG
CTCCGTGATTTTTGGTGTTCTGTCACGTTCTATGTTGTTTTATGAAGATC
TCCTTGCGGCGTTGGTAGTTTACTTGCCCGGTGTTTCCATTATTGTGATC
GTGCTTTTCCTTCTTATGTCACGTTGTGTGACCGATGTCGAATTTGTCTA
TAAATCTGGGTTGTTTATGAGCGTGGGAATGGTGTCCGGGTCATTGTCGA
CAAGAATTTCAAGCGATATGGGGGATTATCGAGTGGGATTCCCTTTTCTG
ACAGCGCCATAGACCCGGTTGACACGAGAATTGCCGTGTCTAGTTTACTC
AAGTAGCTATCTACTCGTTCTAGCTGAATGATACTCACGATGCAATGCGC
GGTTTTTGGGGATCCGTCG back to topCoding sequence (CDS) from alignment at ch8:729277..732945+ >KJC3_011467-T1 ID=KJC3_011467-T1|Name=KJC3_011467-T1|organism=Aspergillus niger KJC3|type=CDS|length=5022bp|location=Sequence derived from alignment at ch8:729277..732945+ (Aspergillus niger KJC3)
ATGGTTCACTCTACGAGCGAGGAACGCGCTGTACATTTGACACGGGAGGC
TGTTGAGTTAATTGATGCTGGCCATCGTGAGGCCGCCTCACGAAATCTCC
GAGAAGCTCTCTCCTTAGCTCCAGAACATCCGGCAGTCAAGGAAGCTTTT
GTGAAAATCCAGCAGGAAGAGGAGAATGGCCATCACCTGCTAGATCTCTG
CCGACGCTATACCGGTGGCAAGGACGAGTCCGCGGGCAAAGACGCCGCCC
TTTATCTCCGTACCGACGGACTCAAGCCTCCCGAGGAGGTTGCATTGGAA
TGTGTCAAGCTCCTGCTGGCGCAAAGGCCTCATGCCTTGTCGTCGCTGCA
GGATGACATTATCTCGGGGCTAGTCCGCCAGAACACCAGCGTGCGGCGCT
ACTTCTCAGAGCAGCTCCAGGTGTCGGTGACCACGTTCTTCGATGAGATT
TACGAAAGAGGCGACGGCGCTGCCGTATGCCTTGACACTGTGGTCTTGGA
CCCTACTGTGTGGCCGTCCGAGGATGCTCGTCTACACTGTGAGCGCGAGC
TTTTCTTGCTCTTCATCGCCAAGCTCATGGAGTCGGGTCACGATATGGAC
GGTCGCTCCCTCAAAGGAATCGCGCGTTTGCTTGCCGTCGATGCAGCGAA
GCTGCAGGAGTTGGTCGACGATGAAGGACTGGACGTGATCCTGTCCTCTT
TGGACAGCCGGCTTCCCCTCGAGTGGAGGAGTCAAGCGACTCTAGCAACC
GTCAAGTACCTTGAAATCTCCAGGCAAGTTGGCGAGGAGAGGTTCTCTCG
GCTCGTAACTGCCAAGGTTGTCAAGGGTCGCAGCGATGATTTGATCGAGG
CATTCTCGGCCACGGCTGCGGTCTTTCCCGTGATACCAGAAGTCGCGGCC
AACCTTTTCCTGTCGGAGAGCTACCTAGCGGCTTTGGCGCCTTTGACCTC
CAGAGACGCGAAGAGCCGCAAGGTCGAGCCCCATTTTCTGGAATTGTTGA
ATGCCGCGTGCATGAACAAGGCCTGTCGGGAAGCAATTTCAAAGCACCTT
TCGACCTGGCTTTCTCACCTTCTCACCAATGGCTGTGATGAGAGCTCCGA
GATGGCGGCGGTCATCTTGGCCAAGGTCCGTACTGCTGCCCAAGTTGGTC
CTTCGGACTCCAACGGCAAGGTAGAGGAAGATAACAGCCGGGTTACCGAG
CTGGTCGACCGCTTCAAGGATTTGATGTCGAAGCGTAAGACCGAGAATCT
GTCAAACGTGATCGAGGGCTTAGCCTATGCATCTGTAAAGGCCACCGTCA
AGGAACAGCTCGCCAATGATGTGGCATTCTTACAGGATCTCATCAAGATT
CTGCGCGAGAATTGCGCCGATTCTTCAGTGCTTTACGGTGGTCTCATGAT
CATTGTAAACCTCACACAATTCCCACCCACTTTGACAGAAGAGCAGAAGA
AAATGTCCCAACTCAAGTCTTATGCCGAGGCCTCTCCTATCGGGGCCCGA
GCAAAGCCAGATCCCCTTGATGACGAGCAACATGTCATCGCACGTTGCAG
TGCGCTCATCAAGGCAGGTGTCATGCCTCTTCTGGTAGATTGCGGTAAGA
CAAATCTCTCCTCAGTGCAAGGTCTCATGGGAAAGATCGTCCTTGCCCTG
TCATGGGACCGAAAGTCTCGGGGAACCTTGGCACAGCAAGGTGCTGTCAA
ATTCTTGCTCGTTATGGCAGCCGCGAAGCAGGGGATCCCGGGGACGAACG
CCACCGAAGCGGTACAGAATGCATCCCAAGCACTCGCGCGAATTCTGATC
TCCGTCAACCCGGTCCACGTGTTCCCCTCCTCTGGCTTCCCCCAGATCAC
ATCCGCTATCAGGCCTCTGACCGCGCTTCTGGTAAGCCCGGAGACGACTA
GTCTGACGGCGGAACAACCGCGGAATCTTTTACCGGTCTTTGAGAGTCTG
CTTGCTCTAACGAACCTCGCCTCCCATCCAGACGAGACTGCTCCTGAAGC
TATCGTCCGCCAAGCCTGGCCCGTAGTAGAGGATCTCCTGCTCTCCAGTA
GTCCCATGGTTCAGCGAGCTGCCTGCGAGCTCATCTGCAATTTGATGACG
TGCGAGTCCGGCATCGTCAAATATGCCGATGGCTCTAAGCGCGCGGCGCA
ACGGCTGCATGTGCTGTTGGCTCTCACCGATACGGACGATATGGCAACCC
GCAGCGCTGCTGGCGGAGCTCTTGCGATGCTGACCGAATTCGAAGCAGCC
ATTGCCGGTATCCTGGAACGGCCGCGGGGTGTCCAGCTACTGCTGGCCCT
GTGCCAGGAAGAGGATGAAGGTTTAGTGCATCGCGGCGTAGCCTGTGTGC
GGAACTTGACCTGTCTCGCCACCGGAGATATTGGCCGGCGGGCCAAGGAA
GCCATTAAAGCAAACGGAGGAGTTAATATATTGAGCAATGTGCTGAAGAA
GACGAAGAACCCCGCGGTACTTCAAGTCGGGGTCGAAGCCTTGAAGCCAT
TGGTCGAATAGATGGTTCACTCTACGAGCGAGGAACGCGCTGTACATTTG
ACACGGGAGGCTGTTGAGTTAATTGATGCTGGCCATCGTGAGGCCGCCTC
ACGAAATCTCCGAGAAGCTCTCTCCTTAGCTCCAGAACATCCGGCAGTCA
AGGAAGCTTTTGTGAAAATCCAGCAGGAAGAGGAGAATGGCCATCACCTG
CTAGATCTCTGCCGACGCTATACCGGTGGCAAGGACGAGTCCGCGGGCAA
AGACGCCGCCCTTTATCTCCGTACCGACGGACTCAAGCCTCCCGAGGAGG
TTGCATTGGAATGTGTCAAGCTCCTGCTGGCGCAAAGGCCTCATGCCTTG
TCGTCGCTGCAGGATGACATTATCTCGGGGCTAGTCCGCCAGAACACCAG
CGTGCGGCGCTACTTCTCAGAGCAGCTCCAGGTGTCGGTGACCACGTTCT
TCGATGAGATTTACGAAAGAGGCGACGGCGCTGCCGTATGCCTTGACACT
GTGGTCTTGGACCCTACTGTGTGGCCGTCCGAGGATGCTCGTCTACACTG
TGAGCGCGAGCTTTTCTTGCTCTTCATCGCCAAGCTCATGGAGTCGGGTC
ACGATATGGACGGTCGCTCCCTCAAAGGAATCGCGCGTTTGCTTGCCGTC
GATGCAGCGAAGCTGCAGGAGTTGGTCGACGATGAAGGACTGGACGTGAT
CCTGTCCTCTTTGGACAGCCGGCTTCCCCTCGAGTGGAGGAGTCAAGCGA
CTCTAGCAACCGTCAAGTACCTTGAAATCTCCAGGCAAGTTGGCGAGGAG
AGGTTCTCTCGGCTCGTAACTGCCAAGGTTGTCAAGGGTCGCAGCGATGA
TTTGATCGAGGCATTCTCGGCCACGGCTGCGGTCTTTCCCGTGATACCAG
AAGTCGCGGCCAACCTTTTCCTGTCGGAGAGCTACCTAGCGGCTTTGGCG
CCTTTGACCTCCAGAGACGCGAAGAGCCGCAAGGTCGAGCCCCATTTTCT
GGAATTGTTGAATGCCGCGTGCATGAACAAGGCCTGTCGGGAAGCAATTT
CAAAGCACCTTTCGACCTGGCTTTCTCACCTTCTCACCAATGGCTGTGAT
GAGAGCTCCGAGATGGCGGCGGTCATCTTGGCCAAGGTCCGTACTGCTGC
CCAAGTTGGTCCTTCGGACTCCAACGGCAAGGTAGAGGAAGATAACAGCC
GGGTTACCGAGCTGGTCGACCGCTTCAAGGATTTGATGTCGAAGCGTAAG
ACCGAGAATCTGTCAAACGTGATCGAGGGCTTAGCCTATGCATCTGTAAA
GGCCACCGTCAAGGAACAGCTCGCCAATGATGTGGCATTCTTACAGGATC
TCATCAAGATTCTGCGCGAGAATTGCGCCGATTCTTCAGTGCTTTACGGT
GGTCTCATGATCATTGTAAACCTCACACAATTCCCACCCACTTTGACAGA
AGAGCAGAAGAAAATGTCCCAACTCAAGTCTTATGCCGAGGCCTCTCCTA
TCGGGGCCCGAGCAAAGCCAGATCCCCTTGATGACGAGCAACATGTCATC
GCACGTTGCAGTGCGCTCATCAAGGCAGGTGTCATGCCTCTTCTGGTAGA
TTGCGGTAAGACAAATCTCTCCTCAGTGCAAGGTCTCATGGGAAAGATCG
TCCTTGCCCTGTCATGGGACCGAAAGTCTCGGGGAACCTTGGCACAGCAA
GGTGCTGTCAAATTCTTGCTCGTTATGGCAGCCGCGAAGCAGGGGATCCC
GGGGACGAACGCCACCGAAGCGGTACAGAATGCATCCCAAGCACTCGCGC
GAATTCTGATCTCCGTCAACCCGGTCCACGTGTTCCCCTCCTCTGGCTTC
CCCCAGATCACATCCGCTATCAGGCCTCTGACCGCGCTTCTGGTAAGCCC
GGAGACGACTAGTCTGACGGCGGAACAACCGCGGAATCTTTTACCGGTCT
TTGAGAGTCTGCTTGCTCTAACGAACCTCGCCTCCCATCCAGACGAGACT
GCTCCTGAAGCTATCGTCCGCCAAGCCTGGCCCGTAGTAGAGGATCTCCT
GCTCTCCAGTAGTCCCATGGTTCAGCGAGCTGCCTGCGAGCTCATCTGCA
ATTTGATGACGTGCGAGTCCGGCATCGTCAAATATGCCGATGGCTCTAAG
CGCGCGGCGCAACGGCTGCATGTGCTGTTGGCTCTCACCGATACGGACGA
TATGGCAACCCGCAGCGCTGCTGGCGGAGCTCTTGCGATGCTGACCGAAT
TCGAAGCAGCCATTGCCGGTATCCTGGAACGGCCGCGGGGTGTCCAGCTA
CTGCTGGCCCTGTGCCAGGAAGAGGATGAAGGTTTAGTGCATCGCGGCGT
AGCCTGTGTGCGGAACTTGACCTGTCTCGCCACCGGAGATATTGGCCGGC
GGGCCAAGGAAGCCATTAAAGCAAACGGAGGAGTTAATATATTGAGCAAT
GTGCTGAAGAAGACGAAGAACCCCGCGGTACTTCAAGTCGGGGTCGAAGC
CTTGAAGCCATTGGTCGAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011467-T1.utr5p1 | KJC3_011467-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011467-T1.utr3p1 | KJC3_011467-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261W1K |
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR024660 |
| DBxref | InterPro:IPR011989 |
| DBxref | PFAM:PF11701 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:729277..732945 + |
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