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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:743873..745749+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011471-T1 ID=KJC3_011471-T1|Name=KJC3_011471-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1877bp|location=Sequence derived from alignment at ch8:743873..745749+ (Aspergillus niger KJC3)
CTGCCCGCCTCCATCTCCATCTCCGTCCCTTAACCCCCCTCTTCCCCTCC
AATCTCCCTCCTCGTGATTATTCTTGCCCGTCCTTCCTGGCGGAGTTCCT
GGATGATTGTGCTCTCATCCTCTCAACGCCAATCAATCGTCTAATTACAT
CTCTTCCATCTCCTTCTTTGTCCGGCCAGTGATCAGGGGGAGTGTGCGTG
TACTCCACATCATCAGTCATGGCTTCCCAGACTCCGGCCGTTGTCATGGA
CAAGTATGCCATTCACCATCCCCATATCACACAATACTTGAGCATCCGCT
AACTTGCACGTTCTCTCTGTTCAGCGGTACCGGTTATTCCAAGCTTGGTA
GGTCTCCTGATAGCTTCCACGTGGAGCTCCGCCGGCAAGCTCCAGGCTGA
CAAGTCTCCAGGTTTCGCCGGTAACGACTCGCCCTCTTTCGTCTTTCCCA
CCGCAATTGCGACCAAAGCTGGTGCCGGAAGCGCTGGCTCCTCCGCTGCC
GGTAGACCTCCTGTTGCGAACAAACCGTCCTTCCTAGCTAGCGGTGGTGG
GGCAGGCTCCCATCTATCCGCGAAGCGTGGTACAGAGGACTTGGACTTCT
TCATTGGCGATGAAGCTCTGGCAGCGGCCAACGGGCCCGGTTATGCGATC
AACTACCCCATTCGCCATGGTCAGATCGAGAACTGGGATCACATGGAGCG
GTTCTGGTCGAATTCCATCTTTAAGTACTTGCGCGTCGAGCCGGAGGACC
ACTACTTCCTCCTCACTGAGCCGGTAAGACCCCTCGATTCCTTCCAATGG
CTCTTCGAGGATGCAATGCTGATCGGGTGTTGTAAACAAAGCCCTTGAAC
CCCCCCGAGAACCGTGAGAACACCGCCGAGATCATGTTCGAGTCTTTCAA
CTGTGCCGGTCTATACATTGCCGTCCAGGCTGTGTTGGCCCTTGCTGCCT
CGTGGACCTCCTCGAAGGTGACCGACCGCTCTCTCACCGGAACGGTCATC
GATTCCGGTGACGGTGTCACACACGTTATTCCCGTCGCCGAAGGCTACGT
CATCGGATCATCTATCAAGAGTATACCCATTGCCGGTCGCGATATCACCT
ACTTTGTCCAGAGCTTGCTCCGTGACCGCGGTGAGCCGGATAGCAGCCTG
AAGACGGCTGAGAAGGTCAAGGAAGAGTACTGCTACGTGTGCCCCGACAT
CGTCAAGGAATTCGCCCGCTACGACCGTGAGCCGGACCGCCTGCTTAAGC
ACACCGTGACTTCGCCCAACGGCCGGACCGTGAGCATCGATGTGGGCTAC
GAACGTTTCCTGGCGCCCGAGATCTTCTTCAACCCCGAGATTTATTCCTC
GGACTTTTTGACCCCCCTGCCTAATGTCGTCGACGGCGTGATCCAGTCTT
CCCCCATCGATGTGAGAAGGGGTCTTTACAAGAACATTGTGTTGTCCGGT
GGATCTACGCTGTACAAGGACTTTGGACGGCGTCTTCAGCGTGACATCCG
TCATCTGGTGGATGCACGCATTCGGGCGTCGGAGGCGCGCAGCGGAGGCG
CCAGAAGTGGTGGATTGGACGTGGCAGTTGTGACACACAAGAGACAGCGC
CATGGACCGTGGTTCGGAGGTAGCTTGCTCGGACAGACGCCGGAGTTCCG
CAGTTACTGCCACACCAAGGCAGAGTACGACGAGATTGGTCCTAGTATTG
TGCGCCGCTTTGCGCTGTTGGGAGGCCCTGGCAGTTCGTAAACATGTGGT
TCTGTCTATAGTTTAACTTGATATGCTGCTGCCTTGCTACCAATATCCGG
TGATAGTAAATAGATGACGGTTGTCTGTTTGTCTTGATTTTGTATATACT
AAATGTATGGTTACGCGTCTGCTATAG back to topCoding sequence (CDS) from alignment at ch8:743873..745749+ >KJC3_011471-T1 ID=KJC3_011471-T1|Name=KJC3_011471-T1|organism=Aspergillus niger KJC3|type=CDS|length=5280bp|location=Sequence derived from alignment at ch8:743873..745749+ (Aspergillus niger KJC3)
ATGGCTTCCCAGACTCCGGCCGTTGTCATGGACAACGGTACCGGTTATTC
CAAGCTTGGTTTCGCCGGTAACGACTCGCCCTCTTTCGTCTTTCCCACCG
CAATTGCGACCAAAGCTGGTGCCGGAAGCGCTGGCTCCTCCGCTGCCGGT
AGACCTCCTGTTGCGAACAAACCGTCCTTCCTAGCTAGCGGTGGTGGGGC
AGGCTCCCATCTATCCGCGAAGCGTGGTACAGAGGACTTGGACTTCTTCA
TTGGCGATGAAGCTCTGGCAGCGGCCAACGGGCCCGGTTATGCGATCAAC
TACCCCATTCGCCATGGTCAGATCGAGAACTGGGATCACATGGAGCGGTT
CTGGTCGAATTCCATCTTTAAGTACTTGCGCGTCGAGCCGGAGGACCACT
ACTTCCTCCTCACTGAGCCGCCCTTGAACCCCCCCGAGAACCGTGAGAAC
ACCGCCGAGATCATGTTCGAGTCTTTCAACTGTGCCGGTCTATACATTGC
CGTCCAGGCTGTGTTGGCCCTTGCTGCCTCGTGGACCTCCTCGAAGGTGA
CCGACCGCTCTCTCACCGGAACGGTCATCGATTCCGGTGACGGTGTCACA
CACGTTATTCCCGTCGCCGAAGGCTACGTCATCGGATCATCTATCAAGAG
TATACCCATTGCCGGTCGCGATATCACCTACTTTGTCCAGAGCTTGCTCC
GTGACCGCGGTGAGCCGGATAGCAGCCTGAAGACGGCTGAGAAGGTCAAG
GAAGAGTACTGCTACGTGTGCCCCGACATCGTCAAGGAATTCGCCCGCTA
CGACCGTGAGCCGGACCGCCTGCTTAAGCACACCGTGACTTCGCCCAACG
GCCGGACCGTGAGCATCGATGTGGGCTACGAACGTTTCCTGGCGCCCGAG
ATCTTCTTCAACCCCGAGATTTATTCCTCGGACTTTTTGACCCCCCTGCC
TAATGTCGTCGACGGCGTGATCCAGTCTTCCCCCATCGATGTGAGAAGGG
GTCTTTACAAGAACATTGTGTTGTCCGGTGGATCTACGCTGTACAAGGAC
TTTGGACGGCGTCTTCAGCGTGACATCCGTCATCTGGTGGATGCACGCAT
TCGGGCGTCGGAGGCGCGCAGCGGAGGCGCCAGAAGTGGTGGATTGGACG
TGGCAGTTGTGACACACAAGAGACAGCGCCATGGACCGTGGTTCGGAGGT
AGCTTGCTCGGACAGACGCCGGAGTTCCGCAGTTACTGCCACACCAAGGC
AGAGTACGACGAGATTGGTCCTAGTATTGTGCGCCGCTTTGCGCTGTTGG
GAGGCCCTGGCAGTTCGTAAATGGCTTCCCAGACTCCGGCCGTTGTCATG
GACAACGGTACCGGTTATTCCAAGCTTGGTTTCGCCGGTAACGACTCGCC
CTCTTTCGTCTTTCCCACCGCAATTGCGACCAAAGCTGGTGCCGGAAGCG
CTGGCTCCTCCGCTGCCGGTAGACCTCCTGTTGCGAACAAACCGTCCTTC
CTAGCTAGCGGTGGTGGGGCAGGCTCCCATCTATCCGCGAAGCGTGGTAC
AGAGGACTTGGACTTCTTCATTGGCGATGAAGCTCTGGCAGCGGCCAACG
GGCCCGGTTATGCGATCAACTACCCCATTCGCCATGGTCAGATCGAGAAC
TGGGATCACATGGAGCGGTTCTGGTCGAATTCCATCTTTAAGTACTTGCG
CGTCGAGCCGGAGGACCACTACTTCCTCCTCACTGAGCCGCCCTTGAACC
CCCCCGAGAACCGTGAGAACACCGCCGAGATCATGTTCGAGTCTTTCAAC
TGTGCCGGTCTATACATTGCCGTCCAGGCTGTGTTGGCCCTTGCTGCCTC
GTGGACCTCCTCGAAGGTGACCGACCGCTCTCTCACCGGAACGGTCATCG
ATTCCGGTGACGGTGTCACACACGTTATTCCCGTCGCCGAAGGCTACGTC
ATCGGATCATCTATCAAGAGTATACCCATTGCCGGTCGCGATATCACCTA
CTTTGTCCAGAGCTTGCTCCGTGACCGCGGTGAGCCGGATAGCAGCCTGA
AGACGGCTGAGAAGGTCAAGGAAGAGTACTGCTACGTGTGCCCCGACATC
GTCAAGGAATTCGCCCGCTACGACCGTGAGCCGGACCGCCTGCTTAAGCA
CACCGTGACTTCGCCCAACGGCCGGACCGTGAGCATCGATGTGGGCTACG
AACGTTTCCTGGCGCCCGAGATCTTCTTCAACCCCGAGATTTATTCCTCG
GACTTTTTGACCCCCCTGCCTAATGTCGTCGACGGCGTGATCCAGTCTTC
CCCCATCGATGTGAGAAGGGGTCTTTACAAGAACATTGTGTTGTCCGGTG
GATCTACGCTGTACAAGGACTTTGGACGGCGTCTTCAGCGTGACATCCGT
CATCTGGTGGATGCACGCATTCGGGCGTCGGAGGCGCGCAGCGGAGGCGC
CAGAAGTGGTGGATTGGACGTGGCAGTTGTGACACACAAGAGACAGCGCC
ATGGACCGTGGTTCGGAGGTAGCTTGCTCGGACAGACGCCGGAGTTCCGC
AGTTACTGCCACACCAAGGCAGAGTACGACGAGATTGGTCCTAGTATTGT
GCGCCGCTTTGCGCTGTTGGGAGGCCCTGGCAGTTCGTAAATGGCTTCCC
AGACTCCGGCCGTTGTCATGGACAACGGTACCGGTTATTCCAAGCTTGGT
TTCGCCGGTAACGACTCGCCCTCTTTCGTCTTTCCCACCGCAATTGCGAC
CAAAGCTGGTGCCGGAAGCGCTGGCTCCTCCGCTGCCGGTAGACCTCCTG
TTGCGAACAAACCGTCCTTCCTAGCTAGCGGTGGTGGGGCAGGCTCCCAT
CTATCCGCGAAGCGTGGTACAGAGGACTTGGACTTCTTCATTGGCGATGA
AGCTCTGGCAGCGGCCAACGGGCCCGGTTATGCGATCAACTACCCCATTC
GCCATGGTCAGATCGAGAACTGGGATCACATGGAGCGGTTCTGGTCGAAT
TCCATCTTTAAGTACTTGCGCGTCGAGCCGGAGGACCACTACTTCCTCCT
CACTGAGCCGCCCTTGAACCCCCCCGAGAACCGTGAGAACACCGCCGAGA
TCATGTTCGAGTCTTTCAACTGTGCCGGTCTATACATTGCCGTCCAGGCT
GTGTTGGCCCTTGCTGCCTCGTGGACCTCCTCGAAGGTGACCGACCGCTC
TCTCACCGGAACGGTCATCGATTCCGGTGACGGTGTCACACACGTTATTC
CCGTCGCCGAAGGCTACGTCATCGGATCATCTATCAAGAGTATACCCATT
GCCGGTCGCGATATCACCTACTTTGTCCAGAGCTTGCTCCGTGACCGCGG
TGAGCCGGATAGCAGCCTGAAGACGGCTGAGAAGGTCAAGGAAGAGTACT
GCTACGTGTGCCCCGACATCGTCAAGGAATTCGCCCGCTACGACCGTGAG
CCGGACCGCCTGCTTAAGCACACCGTGACTTCGCCCAACGGCCGGACCGT
GAGCATCGATGTGGGCTACGAACGTTTCCTGGCGCCCGAGATCTTCTTCA
ACCCCGAGATTTATTCCTCGGACTTTTTGACCCCCCTGCCTAATGTCGTC
GACGGCGTGATCCAGTCTTCCCCCATCGATGTGAGAAGGGGTCTTTACAA
GAACATTGTGTTGTCCGGTGGATCTACGCTGTACAAGGACTTTGGACGGC
GTCTTCAGCGTGACATCCGTCATCTGGTGGATGCACGCATTCGGGCGTCG
GAGGCGCGCAGCGGAGGCGCCAGAAGTGGTGGATTGGACGTGGCAGTTGT
GACACACAAGAGACAGCGCCATGGACCGTGGTTCGGAGGTAGCTTGCTCG
GACAGACGCCGGAGTTCCGCAGTTACTGCCACACCAAGGCAGAGTACGAC
GAGATTGGTCCTAGTATTGTGCGCCGCTTTGCGCTGTTGGGAGGCCCTGG
CAGTTCGTAAATGGCTTCCCAGACTCCGGCCGTTGTCATGGACAACGGTA
CCGGTTATTCCAAGCTTGGTTTCGCCGGTAACGACTCGCCCTCTTTCGTC
TTTCCCACCGCAATTGCGACCAAAGCTGGTGCCGGAAGCGCTGGCTCCTC
CGCTGCCGGTAGACCTCCTGTTGCGAACAAACCGTCCTTCCTAGCTAGCG
GTGGTGGGGCAGGCTCCCATCTATCCGCGAAGCGTGGTACAGAGGACTTG
GACTTCTTCATTGGCGATGAAGCTCTGGCAGCGGCCAACGGGCCCGGTTA
TGCGATCAACTACCCCATTCGCCATGGTCAGATCGAGAACTGGGATCACA
TGGAGCGGTTCTGGTCGAATTCCATCTTTAAGTACTTGCGCGTCGAGCCG
GAGGACCACTACTTCCTCCTCACTGAGCCGCCCTTGAACCCCCCCGAGAA
CCGTGAGAACACCGCCGAGATCATGTTCGAGTCTTTCAACTGTGCCGGTC
TATACATTGCCGTCCAGGCTGTGTTGGCCCTTGCTGCCTCGTGGACCTCC
TCGAAGGTGACCGACCGCTCTCTCACCGGAACGGTCATCGATTCCGGTGA
CGGTGTCACACACGTTATTCCCGTCGCCGAAGGCTACGTCATCGGATCAT
CTATCAAGAGTATACCCATTGCCGGTCGCGATATCACCTACTTTGTCCAG
AGCTTGCTCCGTGACCGCGGTGAGCCGGATAGCAGCCTGAAGACGGCTGA
GAAGGTCAAGGAAGAGTACTGCTACGTGTGCCCCGACATCGTCAAGGAAT
TCGCCCGCTACGACCGTGAGCCGGACCGCCTGCTTAAGCACACCGTGACT
TCGCCCAACGGCCGGACCGTGAGCATCGATGTGGGCTACGAACGTTTCCT
GGCGCCCGAGATCTTCTTCAACCCCGAGATTTATTCCTCGGACTTTTTGA
CCCCCCTGCCTAATGTCGTCGACGGCGTGATCCAGTCTTCCCCCATCGAT
GTGAGAAGGGGTCTTTACAAGAACATTGTGTTGTCCGGTGGATCTACGCT
GTACAAGGACTTTGGACGGCGTCTTCAGCGTGACATCCGTCATCTGGTGG
ATGCACGCATTCGGGCGTCGGAGGCGCGCAGCGGAGGCGCCAGAAGTGGT
GGATTGGACGTGGCAGTTGTGACACACAAGAGACAGCGCCATGGACCGTG
GTTCGGAGGTAGCTTGCTCGGACAGACGCCGGAGTTCCGCAGTTACTGCC
ACACCAAGGCAGAGTACGACGAGATTGGTCCTAGTATTGTGCGCCGCTTT
GCGCTGTTGGGAGGCCCTGGCAGTTCGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011471-T1.utr5p1 | KJC3_011471-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011471-T1.utr3p1 | KJC3_011471-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR043129 |
| DBxref | InterPro:IPR020902 |
| DBxref | InterPro:IPR004000 |
| DBxref | PFAM:PF00022 |
| Product | actin nucleation center |
| Product | Arp2/3 complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:743873..745749 + |
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