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KJC3_011474-T1, KJC3_011474-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011474-T1
Unique NameKJC3_011474-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:749497..751368+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011474-T1 ID=KJC3_011474-T1|Name=KJC3_011474-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1872bp|location=Sequence derived from alignment at ch8:749497..751368+ (Aspergillus niger KJC3)
CGCCGTCTTGAACTTCCCCGTCCATCACATCTTCTACTCCTCCCTTCTCC
ACCACCCCGGATTATTTGCTCTCAAGTGGCCTCTGCTGGCCAGAGAGCTC
TTCTTCCGCTTCATCATGAGTCTCGCACGTCCGGCCCGATGCCTCTTCTG
CAGCTTCTCGCGTGCGGCCTCCGCCGGCCCTCGCGTGCCTAGTCGCCAGT
TCCACTTGTCATCGATACAGCTCTCCGATCGGAAACCGAAGGTCCCAGAA
GTCAACAAGGCCCCCGAAGGAAAGACCCTGGATGAAATCTACCGGGAAGT
GAAGCTCGACGACTTCAAGCACTATACCGAGGAGGAAAAGGCCGCCCTCC
GGGAAGAATACTCGCCCGAACAGATTGCCGCCATTGAGGCCGGTGAGAAG
GCCATTGACCCCAAAGACCTGGCTGAACAGTTCCGTCTTCGTCGGGATCC
CATGAGATTGAAGTATCTCGATGATTTCTCGGTCATTGAACCCGGCGTGG
ACAAGCACGTTCGCGCCCCCAAGTCCAACTCCGACTACAACGCGACATTC
AAGACCGAGGATGATTTCATGGAAGACTTTGCCCGCTTCTTCGCCGAATC
ATCGGAGGATCCCCAGCCGGCAGATTTCGTACGATTCCTCGAGACCACCC
GGGTGACTCACGGCAAGGAGGAGAACGAGCTCAACGGACACAGCGCGCTC
GCACCCAATCTCTTGAACGATGGGGAGACCTTGGAACACATGGGCGACGA
GGTGGTGGCGAGGCCGCAATACCGCACAAAGACTGGAGAGCTTACGTTCT
TGAACCCCGACGAACCCAACGAGGCGGAGAAGAGACTTTTCCAGGTCACG
GGCTTCGGTAGAGATTACCTCAAGTCTCTGTACATAAAGGACCTCGTTAT
TCGCCGTGTCAGCAACCAGACTCGACTGGGTAAGGTCCCGAGTATGTCCG
TCGTTACGGTCGCCGGTAACCAGAACGGTCTTATGGGTATCGGAATCGCC
AAGTCCGATGAAATTATCGATGCCTGCCAACAAGCTCGCGCTCGGGCTGT
CAAGAACATGCAACCTGTGCCGCGCTACGAGAAGCGGACCATCTTCGGTG
ACGTCGAGGGCAAGGTCGGAGCTGTGCAGTTGAAGTTGATGCACCGTCCC
CCAGGTACGATTGTCCGAACCCTGAAATGTTATTTCAACGCTAATGCTTA
ATGTTCCCACAGGTTTCGGTCTCCGCTGCCAGCACCTGATCTTCGAAATG
TGCCGTGCGGCCGGTATTCACGATATCGCAGCCCGTGTCAACCGCTCCAG
AAACCCCATGAACACAGTTAAGGCAGCCTACGAGGCGCTCATGAGCCAGC
GCAACCCCGAGGATATTGCCCGTGCCCGGGGTAAGAAGATGGTCGATGTA
CGGGGAGTGTACTATTCCGGAAGAGGCATTCAACAGGACATGTATGCTCG
CCCGGTTCGTGATCGGGAACATCGTGAGCGGCCGTCCCGGGAAGCTCGGC
GAGCTTGAGGTTGTGGATTTATTCCCATTTGAAAGACACAAAGAAAGATA
TATCTCTCTGGGCACAGCACTGCATACAGACAGCAGCAGCAGACATGTTC
TTTTGCGTCATGGGCGGTGTATATAATGTTTTCCCTTTTTCTCTTTTTCT
TCTGTTCAGATCTTGTATTCTCAGTCTAAACATGTATTTGTATCCACCAG
CATCAAAGCAATACTCAATGATTGAATAACTCTAGAAACCATAAAAGAAA
AGACAGGGGTATATCATATATCACACCATCTATCCACCAACAACCCAAAC
AACCATACACCCAAGAGAAACCGAAAAATAAAAAAATATCCATAAATTCA
ATACCTCCCAAAACTCTCCCCC
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Coding sequence (CDS) from alignment at ch8:749497..751368+

>KJC3_011474-T1 ID=KJC3_011474-T1|Name=KJC3_011474-T1|organism=Aspergillus niger KJC3|type=CDS|length=1086bp|location=Sequence derived from alignment at ch8:749497..751368+ (Aspergillus niger KJC3)
ATGAGTCTCGCACGTCCGGCCCGATGCCTCTTCTGCAGCTTCTCGCGTGC
GGCCTCCGCCGGCCCTCGCGTGCCTAGTCGCCAGTTCCACTTGTCATCGA
TACAGCTCTCCGATCGGAAACCGAAGGTCCCAGAAGTCAACAAGGCCCCC
GAAGGAAAGACCCTGGATGAAATCTACCGGGAAGTGAAGCTCGACGACTT
CAAGCACTATACCGAGGAGGAAAAGGCCGCCCTCCGGGAAGAATACTCGC
CCGAACAGATTGCCGCCATTGAGGCCGGTGAGAAGGCCATTGACCCCAAA
GACCTGGCTGAACAGTTCCGTCTTCGTCGGGATCCCATGAGATTGAAGTA
TCTCGATGATTTCTCGGTCATTGAACCCGGCGTGGACAAGCACGTTCGCG
CCCCCAAGTCCAACTCCGACTACAACGCGACATTCAAGACCGAGGATGAT
TTCATGGAAGACTTTGCCCGCTTCTTCGCCGAATCATCGGAGGATCCCCA
GCCGGCAGATTTCGTACGATTCCTCGAGACCACCCGGGTGACTCACGGCA
AGGAGGAGAACGAGCTCAACGGACACAGCGCGCTCGCACCCAATCTCTTG
AACGATGGGGAGACCTTGGAACACATGGGCGACGAGGTGGTGGCGAGGCC
GCAATACCGCACAAAGACTGGAGAGCTTACGTTCTTGAACCCCGACGAAC
CCAACGAGGCGGAGAAGAGACTTTTCCAGGTCACGGGCTTCGGTAGAGAT
TACCTCAAGTCTCTGTACATAAAGGACCTCGTTATTCGCCGTGTCAGCAA
CCAGACTCGACTGGGTAAGGTCCCGAGTATGTCCGTCGTTACGGTCGCCG
GTAACCAGAACGGTCTTATGGGTATCGGAATCGCCAAGTCCGATGAAATT
ATCGATGCCTGCCAACAAGCTCGCGCTCGGGCTGTCAAGAACATGCAACC
TGTGCCGCGCTACGAGAAGCGGACCATCTTCGGTGACGTCGAGGGCAAGG
TCGGAGCTGTGCAGTTGAAGTTGATGCACCGTCCCCCAGGTACGATTGTC
CGAACCCTGAAATGTTATTTCAACGCTAATGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011474KJC3_011474Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011474-T1.utr5p1KJC3_011474-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011474-T1.exon1KJC3_011474-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011474-T1.cdsKJC3_011474-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011474-T1.utr3p1KJC3_011474-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011474-T1KJC3_011474-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013810
DBxrefPFAM:PF00333
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:749497..751368 +
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