You are here

Home

KJC3_011493-T1, KJC3_011493-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011493-T1
Unique NameKJC3_011493-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:802810..803131-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011493-T1 ID=KJC3_011493-T1|Name=KJC3_011493-T1|organism=Aspergillus niger KJC3|type=mRNA|length=322bp|location=Sequence derived from alignment at ch8:802810..803131- (Aspergillus niger KJC3)
ATGGCCGACAAACTCCGCACGATCCAAAACCTCGAGGCGATGCAAGCGCG
CTACATCGGTACGGGCCACGCCGACACGACGAAATACGAATGGGTGTCGA
ACATCGTGAGAGATAGTTACGCCTCTTATATTGGACACCCGCCTATGTTG
TCGTATATGGCGCTGGGAATGGGCGAGTCCAAGGAGAAGGTCAGGGCCGC
GATGATTGAGAAGATGGTTAGAGGGGCGGGGAATCCGCCGGAGGTTGGTT
ATCCTTATTTTTCTTTCTTGATTTTGGTTTTGTGGATGGGGCTGATGATG
AGGTGTTTAGACGCAGGAATAA
back to top

Coding sequence (CDS) from alignment at ch8:802810..803131-

>KJC3_011493-T1 ID=KJC3_011493-T1|Name=KJC3_011493-T1|organism=Aspergillus niger KJC3|type=CDS|length=510bp|location=Sequence derived from alignment at ch8:802810..803131- (Aspergillus niger KJC3)
ACGCAGGAATAAATGGCCGACAAACTCCGCACGATCCAAAACCTCGAGGC
GATGCAAGCGCGCTACATCGGTACGGGCCACGCCGACACGACGAAATACG
AATGGGTGTCGAACATCGTGAGAGATAGTTACGCCTCTTATATTGGACAC
CCGCCTATGTTGTCGTATATGGCGCTGGGAATGGGCGAGTCCAAGGAGAA
GGTCAGGGCCGCGATGATTGAGAAGATGGTTAGAGGGGCGGGGAATCCGC
CGGAGACGCAGGAATAAATGGCCGACAAACTCCGCACGATCCAAAACCTC
GAGGCGATGCAAGCGCGCTACATCGGTACGGGCCACGCCGACACGACGAA
ATACGAATGGGTGTCGAACATCGTGAGAGATAGTTACGCCTCTTATATTG
GACACCCGCCTATGTTGTCGTATATGGCGCTGGGAATGGGCGAGTCCAAG
GAGAAGGTCAGGGCCGCGATGATTGAGAAGATGGTTAGAGGGGCGGGGAA
TCCGCCGGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011493KJC3_011493Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011493-T1KJC3_011493-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011493-T1.cdsKJC3_011493-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011493-T1.exon2KJC3_011493-T1.exon2Aspergillus niger KJC3exon
KJC3_011493-T1.exon1KJC3_011493-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR009846
DBxrefInterPro:IPR017089
DBxrefPFAM:PF07189
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:802810..803131 -
Powered by Drupal