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KJC3_011495-T1, KJC3_011495-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011495-T1
Unique NameKJC3_011495-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:805021..806748-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011495-T1 ID=KJC3_011495-T1|Name=KJC3_011495-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1728bp|location=Sequence derived from alignment at ch8:805021..806748- (Aspergillus niger KJC3)
CAAGATCCAGTATAGCCCGCCATGGCTCCCAAGAAGGACTCCAAGACCAA
GGTCCGGGTGCAGCCCGTTCCAGAGAAACGCGGCTATGAATTCGGAGGCC
CGTATGTACTCAATGCCCAGTTACAATTGACATTTGGGATACTGACCCTA
CAGTCTCGGTGCGTTCGGGATCGTGTTTGGTCTGCCCGTGCTGGTTTACA
GCTTCACCTTCCTGTGTAACGATGTCTCCGGCTGCCCGGCACCTTCGTTA
CTACACCCTTCTACCGTGACGCTTGACCAATTGAAGGCAGAGGTTGGCTG
GCCCAAGGGAGGTTTTGCGGATTTTTACGACACAAGCGTGACACTCTGGG
TCTTGGGCTATTATCTGCTTAGCTTGGCGATGTACGTGTTCCTGCCTGGC
CAGGAGGTCGAGGGCACTGAATTGGCGTGTGGAGGAAGATTGCCCTACAA
GTTCAACGGTTGGTTTCTTCAATTGACTCGTATCTTCCTCTCTAACACGC
CCTGCAGCTTTTCTGTCGGCCGTCCTGATCCTCTCCGGCTGTGCGACGGG
CACTTACATCTACGGCGCGGACTTTGCTGTCTGGACTTTTCTCTGGGACA
ACTATCTGCAGGTAATCACCGCCAACCTGGTGATCTGTACTGTCATCTCC
ATCTTCGTCTATGCGAAGAGCTTCACTGTTCCTGCCCCTGGGCAGCCCAA
CCCTGAGCTCCGCCAGCTAGCTCCGGGTGGCCACACTGGCAACGCGTTGT
ATGATTTCTTCATTGGCCGAGAGCTGAACCCCCGGGTACGCCTGCCAATT
CCCTTCGTCAGCGAAGCTTCGCGCACGATCGATATCAAGTCCTGGCTCGA
AATGCGCCCCGGCTTGCTGGGGTGGATCATCCTGAACTTGTCGAACATTG
CCCGCCAGTACCGCACCTACGGCTACATCACGGACTCGATCGTCATCTCG
ACTGCGTTCCAGGCGTTCTACGTCCTGGATGGCCTGTACATGGAGCCTGC
CCTGCTGACTACTATGGACATTATTATGGACGGCTTCGGGTTCATGCTCT
CATTTGGCGACCTCGTCTGGGTCCCTTTTATCTACAACTTCCAGACTCGC
TACCTGGCCGTCTTTCCGTATGAGCTGGGTTTCAATGGCATTCTGCTCGT
CCTGGCCGTCACCGCTGTGGGCTACTCGATCTTCCGGGGCGCCAACAACC
AGAAGAATCGGTTCCGCACCAACCCGAACGACCCCCGCGTCAAGCACCTC
AAGTACATCCAGACGGCTAGTGGCTCCAAGCTGATCACGTCTGGCTGGTG
GGGAAGCGCCCGCCACATCAACTACCTGGGCGACTGGGTCATGTCGTGGT
CGTACTGCCTGCCTACGGGCATTGCCGGCTACGCTATTATTCAGACTATC
AACCCGGCCACCGGGGATCTGCAGAAGCAGGCAGTGCAGACCCCCGAGAG
CCGAGGCTGGGGAATGATCTTTACTTACTTCTTCCTGGTGTACTTTGGCA
CGCTGCTGATCCACCGCGAGCAGCGGGACGAGGAGAAGTGCAAGCGCAAG
TACGGAGCCGACTGGGACCGGTATACGTCGTTGGTCCGCAGCCGGATCAT
TCCTGGCATTTACTAAAGATAATGGGGATATAGACCGAACAAAAGTTCTT
AATGTATGATACTTTCTCGTCTGAACGACTTCACATATCGGACATGACAT
GTATTAGCTAGATTGGACATCTTTATTC
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Coding sequence (CDS) from alignment at ch8:805021..806748-

>KJC3_011495-T1 ID=KJC3_011495-T1|Name=KJC3_011495-T1|organism=Aspergillus niger KJC3|type=CDS|length=4482bp|location=Sequence derived from alignment at ch8:805021..806748- (Aspergillus niger KJC3)
CTTTTCTGTCGGCCGTCCTGATCCTCTCCGGCTGTGCGACGGGCACTTAC
ATCTACGGCGCGGACTTTGCTGTCTGGACTTTTCTCTGGGACAACTATCT
GCAGGTAATCACCGCCAACCTGGTGATCTGTACTGTCATCTCCATCTTCG
TCTATGCGAAGAGCTTCACTGTTCCTGCCCCTGGGCAGCCCAACCCTGAG
CTCCGCCAGCTAGCTCCGGGTGGCCACACTGGCAACGCGTTGTATGATTT
CTTCATTGGCCGAGAGCTGAACCCCCGGGTACGCCTGCCAATTCCCTTCG
TCAGCGAAGCTTCGCGCACGATCGATATCAAGTCCTGGCTCGAAATGCGC
CCCGGCTTGCTGGGGTGGATCATCCTGAACTTGTCGAACATTGCCCGCCA
GTACCGCACCTACGGCTACATCACGGACTCGATCGTCATCTCGACTGCGT
TCCAGGCGTTCTACGTCCTGGATGGCCTGTACATGGAGCCTGCCCTGCTG
ACTACTATGGACATTATTATGGACGGCTTCGGGTTCATGCTCTCATTTGG
CGACCTCGTCTGGGTCCCTTTTATCTACAACTTCCAGACTCGCTACCTGG
CCGTCTTTCCGTATGAGCTGGGTTTCAATGGCATTCTGCTCGTCCTGGCC
GTCACCGCTGTGGGCTACTCGATCTTCCGGGGCGCCAACAACCAGAAGAA
TCGGTTCCGCACCAACCCGAACGACCCCCGCGTCAAGCACCTCAAGTACA
TCCAGACGGCTAGTGGCTCCAAGCTGATCACGTCTGGCTGGTGGGGAAGC
GCCCGCCACATCAACTACCTGGGCGACTGGGTCATGTCGTGGTCGTACTG
CCTGCCTACGGGCATTGCCGGCTACGCTATTATTCAGACTATCAACCCGG
CCACCGGGGATCTGCAGAAGCAGGCAGTGCAGACCCCCGAGAGCCGAGGC
TGGGGAATGATCTTTACTTACTTCTTCCTGGTGTACTTTGGCACGCTGCT
GATCCACCGCGAGCAGCGGGACGAGGAGAAGTGCAAGCGCAAGTACGGAG
CCGACTGGGACCGGTATACGTCGTTGGTCCGCAGCCGGATCATTCCTGGC
ATTTACTAATCTCGGTGCGTTCGGGATCGTGTTTGGTCTGCCCGTGCTGG
TTTACAGCTTCACCTTCCTGTGTAACGATGTCTCCGGCTGCCCGGCACCT
TCGTTACTACACCCTTCTACCGTGACGCTTGACCAATTGAAGGCAGAGGT
TGGCTGGCCCAAGGGAGGTTTTGCGGATTTTTACGACACAAGCGTGACAC
TCTGGGTCTTGGGCTATTATCTGCTTAGCTTGGCGATGTACGTGTTCCTG
CCTGGCCAGGAGGTCGAGGGCACTGAATTGGCGTGTGGAGGAAGATTGCC
CTACAAGTTCAACGATGGCTCCCAAGAAGGACTCCAAGACCAAGGTCCGG
GTGCAGCCCGTTCCAGAGAAACGCGGCTATGAATTCGGAGGCCCCTTTTC
TGTCGGCCGTCCTGATCCTCTCCGGCTGTGCGACGGGCACTTACATCTAC
GGCGCGGACTTTGCTGTCTGGACTTTTCTCTGGGACAACTATCTGCAGGT
AATCACCGCCAACCTGGTGATCTGTACTGTCATCTCCATCTTCGTCTATG
CGAAGAGCTTCACTGTTCCTGCCCCTGGGCAGCCCAACCCTGAGCTCCGC
CAGCTAGCTCCGGGTGGCCACACTGGCAACGCGTTGTATGATTTCTTCAT
TGGCCGAGAGCTGAACCCCCGGGTACGCCTGCCAATTCCCTTCGTCAGCG
AAGCTTCGCGCACGATCGATATCAAGTCCTGGCTCGAAATGCGCCCCGGC
TTGCTGGGGTGGATCATCCTGAACTTGTCGAACATTGCCCGCCAGTACCG
CACCTACGGCTACATCACGGACTCGATCGTCATCTCGACTGCGTTCCAGG
CGTTCTACGTCCTGGATGGCCTGTACATGGAGCCTGCCCTGCTGACTACT
ATGGACATTATTATGGACGGCTTCGGGTTCATGCTCTCATTTGGCGACCT
CGTCTGGGTCCCTTTTATCTACAACTTCCAGACTCGCTACCTGGCCGTCT
TTCCGTATGAGCTGGGTTTCAATGGCATTCTGCTCGTCCTGGCCGTCACC
GCTGTGGGCTACTCGATCTTCCGGGGCGCCAACAACCAGAAGAATCGGTT
CCGCACCAACCCGAACGACCCCCGCGTCAAGCACCTCAAGTACATCCAGA
CGGCTAGTGGCTCCAAGCTGATCACGTCTGGCTGGTGGGGAAGCGCCCGC
CACATCAACTACCTGGGCGACTGGGTCATGTCGTGGTCGTACTGCCTGCC
TACGGGCATTGCCGGCTACGCTATTATTCAGACTATCAACCCGGCCACCG
GGGATCTGCAGAAGCAGGCAGTGCAGACCCCCGAGAGCCGAGGCTGGGGA
ATGATCTTTACTTACTTCTTCCTGGTGTACTTTGGCACGCTGCTGATCCA
CCGCGAGCAGCGGGACGAGGAGAAGTGCAAGCGCAAGTACGGAGCCGACT
GGGACCGGTATACGTCGTTGGTCCGCAGCCGGATCATTCCTGGCATTTAC
TAATCTCGGTGCGTTCGGGATCGTGTTTGGTCTGCCCGTGCTGGTTTACA
GCTTCACCTTCCTGTGTAACGATGTCTCCGGCTGCCCGGCACCTTCGTTA
CTACACCCTTCTACCGTGACGCTTGACCAATTGAAGGCAGAGGTTGGCTG
GCCCAAGGGAGGTTTTGCGGATTTTTACGACACAAGCGTGACACTCTGGG
TCTTGGGCTATTATCTGCTTAGCTTGGCGATGTACGTGTTCCTGCCTGGC
CAGGAGGTCGAGGGCACTGAATTGGCGTGTGGAGGAAGATTGCCCTACAA
GTTCAACGATGGCTCCCAAGAAGGACTCCAAGACCAAGGTCCGGGTGCAG
CCCGTTCCAGAGAAACGCGGCTATGAATTCGGAGGCCCCTTTTCTGTCGG
CCGTCCTGATCCTCTCCGGCTGTGCGACGGGCACTTACATCTACGGCGCG
GACTTTGCTGTCTGGACTTTTCTCTGGGACAACTATCTGCAGGTAATCAC
CGCCAACCTGGTGATCTGTACTGTCATCTCCATCTTCGTCTATGCGAAGA
GCTTCACTGTTCCTGCCCCTGGGCAGCCCAACCCTGAGCTCCGCCAGCTA
GCTCCGGGTGGCCACACTGGCAACGCGTTGTATGATTTCTTCATTGGCCG
AGAGCTGAACCCCCGGGTACGCCTGCCAATTCCCTTCGTCAGCGAAGCTT
CGCGCACGATCGATATCAAGTCCTGGCTCGAAATGCGCCCCGGCTTGCTG
GGGTGGATCATCCTGAACTTGTCGAACATTGCCCGCCAGTACCGCACCTA
CGGCTACATCACGGACTCGATCGTCATCTCGACTGCGTTCCAGGCGTTCT
ACGTCCTGGATGGCCTGTACATGGAGCCTGCCCTGCTGACTACTATGGAC
ATTATTATGGACGGCTTCGGGTTCATGCTCTCATTTGGCGACCTCGTCTG
GGTCCCTTTTATCTACAACTTCCAGACTCGCTACCTGGCCGTCTTTCCGT
ATGAGCTGGGTTTCAATGGCATTCTGCTCGTCCTGGCCGTCACCGCTGTG
GGCTACTCGATCTTCCGGGGCGCCAACAACCAGAAGAATCGGTTCCGCAC
CAACCCGAACGACCCCCGCGTCAAGCACCTCAAGTACATCCAGACGGCTA
GTGGCTCCAAGCTGATCACGTCTGGCTGGTGGGGAAGCGCCCGCCACATC
AACTACCTGGGCGACTGGGTCATGTCGTGGTCGTACTGCCTGCCTACGGG
CATTGCCGGCTACGCTATTATTCAGACTATCAACCCGGCCACCGGGGATC
TGCAGAAGCAGGCAGTGCAGACCCCCGAGAGCCGAGGCTGGGGAATGATC
TTTACTTACTTCTTCCTGGTGTACTTTGGCACGCTGCTGATCCACCGCGA
GCAGCGGGACGAGGAGAAGTGCAAGCGCAAGTACGGAGCCGACTGGGACC
GGTATACGTCGTTGGTCCGCAGCCGGATCATTCCTGGCATTTACTAATCT
CGGTGCGTTCGGGATCGTGTTTGGTCTGCCCGTGCTGGTTTACAGCTTCA
CCTTCCTGTGTAACGATGTCTCCGGCTGCCCGGCACCTTCGTTACTACAC
CCTTCTACCGTGACGCTTGACCAATTGAAGGCAGAGGTTGGCTGGCCCAA
GGGAGGTTTTGCGGATTTTTACGACACAAGCGTGACACTCTGGGTCTTGG
GCTATTATCTGCTTAGCTTGGCGATGTACGTGTTCCTGCCTGGCCAGGAG
GTCGAGGGCACTGAATTGGCGTGTGGAGGAAGATTGCCCTACAAGTTCAA
CGATGGCTCCCAAGAAGGACTCCAAGACCAAGGTCCGGGTGCAGCCCGTT
CCAGAGAAACGCGGCTATGAATTCGGAGGCCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016628oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0016126sterol biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ERG3KJC3_011495Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011495-T1KJC3_011495-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011495-T1.cdsKJC3_011495-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011495-T1.utr3p1KJC3_011495-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011495-T1.exon3KJC3_011495-T1.exon3Aspergillus niger KJC3exon
KJC3_011495-T1.exon2KJC3_011495-T1.exon2Aspergillus niger KJC3exon
KJC3_011495-T1.exon1KJC3_011495-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011495-T1.utr5p1KJC3_011495-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018083
DBxrefInterPro:IPR001171
DBxrefPFAM:PF01222
Productc-5 sterol desaturase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:805021..806748 -
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