|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:806884..808941+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011496-T1 ID=KJC3_011496-T1|Name=KJC3_011496-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2058bp|location=Sequence derived from alignment at ch8:806884..808941+ (Aspergillus niger KJC3)
CGCCTGCTTCACCTGTTGCTCCTCCTCGTCCTTCCCCCTCTTTTCTCCCT
CTTTTACTTCTTTTCTTTCCCTTTGGTCTCTCCTTTGCGCTACTTTCCTT
CGATTTTCCCAAGCTTACCGATCAGTCCCTACCTCCAGCTGCCTGATCGA
TCCTCCGTTCCCTTCCTCGGCTTAGAACCGTTATCGCCGACCGTCCCGGC
TGCCTCCACCGGAGATCATCCTCCCACCATGAAGCCACCCACATCCTCGT
TGCTGAGGTTCCTCTTCCTTCTGGCTGCTCCGCTTGTCTCTCATGCTGCC
TCCGATTCTTCTGCTCCCAAGGATGGCCTTTCTCCCTGTGTCGTCCGCTC
TCCGACGACCGGCCTATTCTACGATCTGAATACCATCTCCTTATCTCCAC
CCCCGGTAGACGGGGACAAACCTCGCAAAGGCGCCCGAGACGAGAGTTGG
CACGCCAGAGGACACGATTATAATGCCAACTTTACGCTAAACATCTGTGC
GCCCGTGGTCGAAGATATCAAGGATGTGGTGGGGGTGGACCGCTCAAGGT
GGAGGAATGTTAGCGCCTACTATGAGAGGGAGGGTAAAGTCTACTCCATT
GGGTACGGTGACCCTACTTTTCTATACCACTTGCCATAATCACTCGACTG
ACCCGATGCAGTCAACAAGCATCAGACCCCTTCTTCCGCGGCCGAAAGCT
GGTCATGAACTATACCAATGGCTCCCCTTGTGCCGGCGATTACATCGGAA
ATGCCGCCCGCACCAAATCCACCATCATGTCGTTCCTGTGTGAGCGCGAC
ACCCCTGCCTCCCAGGCGACGGTCTCCTTTGTCGGCACCATGGACCAGTG
CACATATTTCTTCGAGGTGCGAAGCTCTGCCGCTTGTGGCGCTACCGCGC
CCACACCGGATAACCCGGGCCTTTCGCCAGGCGGCGTATTCGGCGTAATG
TAAGTAGGAAATACCCTACGGTATGGTCAGCGACTAATAAGCACAGTGCC
TTGATCGCCGTGGCGGCGTACCTAGTCGGTGGTTGCGCATACCAACGAAC
CGTCATGCACCAGCGCGGTTGGAGACAGTGCCCGAACTACAGTCTTTGGG
CGGGAATGCTCGACTTCATCAAAGTAAGTATACTGGCGTTAATTCCGTTC
CGACGGTCCCGGCGGCATGAGCAGGCCTCGTACAAGGAGTTTGGCAATGC
AAGGTTGCCTGTTTCGAGGATGGATTGAATCTGCTTTGGCTGGTCTGGAG
CTCAATTACATCAGGCGTGCTTGCATTCCTTCTTTCCTTACGCTTGTCTT
TCTTTGCTCGTCCTCGAAGTCACTCGTTTGGATATCTAGCCCGTGTTGAA
CACGGTATATACAGTCATTGCTTGTGCAGGCCTGGCAAAGACGTCCATAT
AGAGCAAGCTGGAAACATGTCAATAGCTCGATTGATTGATTCTAGAAATC
TTTCCTTGCTTCACTCATCTATCCGAACACATACAACCGTCTCATTTGCT
ATTCTTCAAGAATACCATTTATTATACAGAACCCTTAGCTAACACCATCT
CCTCTCTCTCTTCCTCCCCAAACAGGACATGATCATCATCCTCCTCTCCT
CCCTAGCCCGCCTCCTCCGCCTAAAACGTTCCCCGGCTCTCGGCCACGGC
CACACCCGCGGCAACAGCGTCAACCACCGCGGCAGTTTCGGCCGTCGAGG
CAGTGACGTCGATGCCGAGAATCGACTGATAGACCAGTTAGATGAGGAGT
GGGAAGATTAAAATTGTTTGTTAGTTGGCAGGCTTTGTTTATTTCTGGGA
CCGATAGCGCAACTTTTATCAGATATGTTATATGTATTGCTGCCAGCATT
GGTTGTATTTGTTGTACAATGGCCGATTATTATATGCATGGTGCATGCAT
GCATTGGTTGATTCATCGATTGATTGAGCTGGCTCTGTTTTATAGCGTCG
TTGATTATTTCTACTACTATGAGGTGCATGAGAACATGTTTTGCATTTTA
CCAACACCGACTTTCGGATATATATTTTGATCAACTAGTAGCTCCTTGCC
AACTGACG back to topCoding sequence (CDS) from alignment at ch8:806884..808941+ >KJC3_011496-T1 ID=KJC3_011496-T1|Name=KJC3_011496-T1|organism=Aspergillus niger KJC3|type=CDS|length=3900bp|location=Sequence derived from alignment at ch8:806884..808941+ (Aspergillus niger KJC3)
ATGAAGCCACCCACATCCTCGTTGCTGAGGTTCCTCTTCCTTCTGGCTGC
TCCGCTTGTCTCTCATGCTGCCTCCGATTCTTCTGCTCCCAAGGATGGCC
TTTCTCCCTGTGTCGTCCGCTCTCCGACGACCGGCCTATTCTACGATCTG
AATACCATCTCCTTATCTCCACCCCCGGTAGACGGGGACAAACCTCGCAA
AGGCGCCCGAGACGAGAGTTGGCACGCCAGAGGACACGATTATAATGCCA
ACTTTACGCTAAACATCTGTGCGCCCGTGGTCGAAGATATCAAGGATGTG
GTGGGGGTGGACCGCTCAAGGTGGAGGAATGTTAGCGCCTACTATGAGAG
GGAGGGTAAAGTCTACTCCATTGGTCAACAAGCATCAGACCCCTTCTTCC
GCGGCCGAAAGCTGGTCATGAACTATACCAATGGCTCCCCTTGTGCCGGC
GATTACATCGGAAATGCCGCCCGCACCAAATCCACCATCATGTCGTTCCT
GTGTGAGCGCGACACCCCTGCCTCCCAGGCGACGGTCTCCTTTGTCGGCA
CCATGGACCAGTGCACATATTTCTTCGAGGTGCGAAGCTCTGCCGCTTGT
GGCGCTACCGCGCCCACACCGGATAACCCGGGCCTTTCGCCAGGCGGCGT
ATTCGGCGTAATTGCCTTGATCGCCGTGGCGGCGTACCTAGTCGGTGGTT
GCGCATACCAACGAACCGTCATGCACCAGCGCGGTTGGAGACAGTGCCCG
AACTACAGTCTTTGGGCGGGAATGCTCGACTTCATCAAAGACATGATCAT
CATCCTCCTCTCCTCCCTAGCCCGCCTCCTCCGCCTAAAACGTTCCCCGG
CTCTCGGCCACGGCCACACCCGCGGCAACAGCGTCAACCACCGCGGCAGT
TTCGGCCGTCGAGGCAGTGACGTCGATGCCGAGAATCGACTGATAGACCA
GTTAGATGAGGAGTGGGAAGATTAAATGAAGCCACCCACATCCTCGTTGC
TGAGGTTCCTCTTCCTTCTGGCTGCTCCGCTTGTCTCTCATGCTGCCTCC
GATTCTTCTGCTCCCAAGGATGGCCTTTCTCCCTGTGTCGTCCGCTCTCC
GACGACCGGCCTATTCTACGATCTGAATACCATCTCCTTATCTCCACCCC
CGGTAGACGGGGACAAACCTCGCAAAGGCGCCCGAGACGAGAGTTGGCAC
GCCAGAGGACACGATTATAATGCCAACTTTACGCTAAACATCTGTGCGCC
CGTGGTCGAAGATATCAAGGATGTGGTGGGGGTGGACCGCTCAAGGTGGA
GGAATGTTAGCGCCTACTATGAGAGGGAGGGTAAAGTCTACTCCATTGGT
CAACAAGCATCAGACCCCTTCTTCCGCGGCCGAAAGCTGGTCATGAACTA
TACCAATGGCTCCCCTTGTGCCGGCGATTACATCGGAAATGCCGCCCGCA
CCAAATCCACCATCATGTCGTTCCTGTGTGAGCGCGACACCCCTGCCTCC
CAGGCGACGGTCTCCTTTGTCGGCACCATGGACCAGTGCACATATTTCTT
CGAGGTGCGAAGCTCTGCCGCTTGTGGCGCTACCGCGCCCACACCGGATA
ACCCGGGCCTTTCGCCAGGCGGCGTATTCGGCGTAATTGCCTTGATCGCC
GTGGCGGCGTACCTAGTCGGTGGTTGCGCATACCAACGAACCGTCATGCA
CCAGCGCGGTTGGAGACAGTGCCCGAACTACAGTCTTTGGGCGGGAATGC
TCGACTTCATCAAAGACATGATCATCATCCTCCTCTCCTCCCTAGCCCGC
CTCCTCCGCCTAAAACGTTCCCCGGCTCTCGGCCACGGCCACACCCGCGG
CAACAGCGTCAACCACCGCGGCAGTTTCGGCCGTCGAGGCAGTGACGTCG
ATGCCGAGAATCGACTGATAGACCAGTTAGATGAGGAGTGGGAAGATTAA
ATGAAGCCACCCACATCCTCGTTGCTGAGGTTCCTCTTCCTTCTGGCTGC
TCCGCTTGTCTCTCATGCTGCCTCCGATTCTTCTGCTCCCAAGGATGGCC
TTTCTCCCTGTGTCGTCCGCTCTCCGACGACCGGCCTATTCTACGATCTG
AATACCATCTCCTTATCTCCACCCCCGGTAGACGGGGACAAACCTCGCAA
AGGCGCCCGAGACGAGAGTTGGCACGCCAGAGGACACGATTATAATGCCA
ACTTTACGCTAAACATCTGTGCGCCCGTGGTCGAAGATATCAAGGATGTG
GTGGGGGTGGACCGCTCAAGGTGGAGGAATGTTAGCGCCTACTATGAGAG
GGAGGGTAAAGTCTACTCCATTGGTCAACAAGCATCAGACCCCTTCTTCC
GCGGCCGAAAGCTGGTCATGAACTATACCAATGGCTCCCCTTGTGCCGGC
GATTACATCGGAAATGCCGCCCGCACCAAATCCACCATCATGTCGTTCCT
GTGTGAGCGCGACACCCCTGCCTCCCAGGCGACGGTCTCCTTTGTCGGCA
CCATGGACCAGTGCACATATTTCTTCGAGGTGCGAAGCTCTGCCGCTTGT
GGCGCTACCGCGCCCACACCGGATAACCCGGGCCTTTCGCCAGGCGGCGT
ATTCGGCGTAATTGCCTTGATCGCCGTGGCGGCGTACCTAGTCGGTGGTT
GCGCATACCAACGAACCGTCATGCACCAGCGCGGTTGGAGACAGTGCCCG
AACTACAGTCTTTGGGCGGGAATGCTCGACTTCATCAAAGACATGATCAT
CATCCTCCTCTCCTCCCTAGCCCGCCTCCTCCGCCTAAAACGTTCCCCGG
CTCTCGGCCACGGCCACACCCGCGGCAACAGCGTCAACCACCGCGGCAGT
TTCGGCCGTCGAGGCAGTGACGTCGATGCCGAGAATCGACTGATAGACCA
GTTAGATGAGGAGTGGGAAGATTAAATGAAGCCACCCACATCCTCGTTGC
TGAGGTTCCTCTTCCTTCTGGCTGCTCCGCTTGTCTCTCATGCTGCCTCC
GATTCTTCTGCTCCCAAGGATGGCCTTTCTCCCTGTGTCGTCCGCTCTCC
GACGACCGGCCTATTCTACGATCTGAATACCATCTCCTTATCTCCACCCC
CGGTAGACGGGGACAAACCTCGCAAAGGCGCCCGAGACGAGAGTTGGCAC
GCCAGAGGACACGATTATAATGCCAACTTTACGCTAAACATCTGTGCGCC
CGTGGTCGAAGATATCAAGGATGTGGTGGGGGTGGACCGCTCAAGGTGGA
GGAATGTTAGCGCCTACTATGAGAGGGAGGGTAAAGTCTACTCCATTGGT
CAACAAGCATCAGACCCCTTCTTCCGCGGCCGAAAGCTGGTCATGAACTA
TACCAATGGCTCCCCTTGTGCCGGCGATTACATCGGAAATGCCGCCCGCA
CCAAATCCACCATCATGTCGTTCCTGTGTGAGCGCGACACCCCTGCCTCC
CAGGCGACGGTCTCCTTTGTCGGCACCATGGACCAGTGCACATATTTCTT
CGAGGTGCGAAGCTCTGCCGCTTGTGGCGCTACCGCGCCCACACCGGATA
ACCCGGGCCTTTCGCCAGGCGGCGTATTCGGCGTAATTGCCTTGATCGCC
GTGGCGGCGTACCTAGTCGGTGGTTGCGCATACCAACGAACCGTCATGCA
CCAGCGCGGTTGGAGACAGTGCCCGAACTACAGTCTTTGGGCGGGAATGC
TCGACTTCATCAAAGACATGATCATCATCCTCCTCTCCTCCCTAGCCCGC
CTCCTCCGCCTAAAACGTTCCCCGGCTCTCGGCCACGGCCACACCCGCGG
CAACAGCGTCAACCACCGCGGCAGTTTCGGCCGTCGAGGCAGTGACGTCG
ATGCCGAGAATCGACTGATAGACCAGTTAGATGAGGAGTGGGAAGATTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011496-T1.utr5p1 | KJC3_011496-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011496-T1.utr3p1 | KJC3_011496-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-23) |
| DBxref | InterPro:IPR028927 |
| DBxref | InterPro:IPR009011 |
| DBxref | PFAM:PF02157 |
| DBxref | PFAM:PF09451 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:806884..808941 + |
|
