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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:830194..833004+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011508-T1 ID=KJC3_011508-T1|Name=KJC3_011508-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2811bp|location=Sequence derived from alignment at ch8:830194..833004+ (Aspergillus niger KJC3)
CATCCCCCCACACAATTCCAATTCTTCGACATCTCGATACCCAATTCCAA
CGTCACCCGATATACATTGACCACCACCATGGCGGTTCGACGGTCCGCCC
GCCTGCGCAGCCGCCAGGCCACCGAGGTGAGCACACCACACCATCCCACT
CAGCCTCCATTCCGATGGGCTGCTCGCGCCCTTGCATGACATTCACTGAC
TCGACCTTAAGGAGCCTGAGGCCCCTGCCGACCCCGTCGTCACTGACAGC
AACGCCCCCTGCGACACGAACAATCACAACAACTCCGAGAACACGTCCGA
AATCGATACAACCATGGCTCGTCTCGGCAAACAGCCGGAGAGATTGCCTC
CCGTCGTGGAGCACGAGGAGCCAGCTGATGCTGCTAAGGATGTCCCCGTG
CAGCGGTCGCGGAAGAAGACCAAGACCGAGACCGCGTCTAAGAGAAGGTC
CAAGGTTGAAGCTAAAGAGCCTGTTGCTGAGGTGACTCCGGTGATCGCTG
AGTCTCAGTCCAACACGGATACGACTGAACCTGCCGTTGCTGAGACAGAA
AAGAAGCCTACTCCCAAGGCTGTGCCTGAACCTGCTGTTGCTGAGACCGA
AAAGAACCCTACCCCCAAGGCTCTACCTGAAACTGCCTCCAAGCTATCGA
CTCCTAAGAAATCTATCCCAACTCTCAAGGGCACACCTGTCCACAGAAAC
ACGCCCGTCCACAGAAGCACTCCCGTCCACAAAAGCACACCCACCAGAAC
CCCCTCCAGCACCCTCGTGCGCCCGTCCCACCAAGAAATGCACCCCAGCA
AGGTCCGCCAGAGCACCACCAAGCAGGCAGACTCCGGTTTGATCCTGGGC
TTCAAGCCCATCAAGAAGGACGCCGAAGGCAAGGTGATTAAGGACACTCT
CGCCGACAACACTCCTACCAAAGCCAAGGCCTCACCCGCTCCCTATTACG
GCACCCCCGCGTTCGAATTTAAGTTTTCCTGCGAATCGCAGCTCAGTGAC
GAGGCCAAGAAGCTCATGGAGACCGTGCGCGAGGATGCTGCTAAGATCAA
AGCCCAGATGACCCTGGAGCCCGACCAGAATCGCGCTGAGGCAGCGGACC
GGAAGATCGTACAGCCCAAGGGCAAGGCCAGTCGTTTCAGCGACGTGCAC
ATGGCCGAATTCAAGAAGATGGACTCCATTGCTGGTCATGCGTCGGCTTT
CCGTGCCACCCCAGGACGCTTCCAGCCAGTGGTCAAGACGCTCAAGAGAA
CCAACTCCAAGGCGCGTTTGGACGAATCGGACCGCAACTCGCCATCGCCA
TCCAAGATTGCACGTCCTTCACCTGCCATTGTTGCCCCTGCTAGCAACAA
ACGCGTCAAGCATGACAAGGCCGATGATGCATCGACGCGTCGTCCCACTG
CAGCCAGTCCTCCTAAGCCTGTGCAACCCCGGCCCAGATCTACAGTGCGC
AGCTCGTTGATGACCCCGACGCGGTCCTCTGCGGCGCGTGCTTCTTCCGT
TACCGCAAGACCGCCCCGCACCTCGATGATCCCATCGCTCGTCCGGTCTC
CTGCTGCGAAGCCGGCCGATGTGCCGCGCACGCCTCAGACAGAGTTCAAC
CCTCGGCTGAAGAGCAACTTGCCCACTTTGGGTAACCTGAAGTCGATCCT
CCGCCGCCACCAGCCTTTGTTCTCCAAGGATCCTTCTAAGATTGCCGCGG
GCACCCATGTGGCTGCTCCCGACTTTACCTCGAACCTGCTGTTCGGATCG
CGAGGCACCACGGAGGAGCCTGCACAGACGCCGTCCCCCAAGAAGCGCGT
GGAGTTCACTCCTAGTGTCAAGGCCCGCCACGAGGAGGTTATGTTCTCGC
CGTCTCCATCGAAGGTTCCGGTTGCCAGTCCCTCGCGGACCACTTCCGAC
GTTGTCTATCCCACCCTGCCGGTGTTGACTCCGGAGCAGAACAGGGTCAG
CGCCAAGTCTCCTGCCCAAGCGACAACCCCGACCATCCGCCATGTCCGCC
CGTCAGATGTCCATGCCAATCCCCTGCCTGAGGTTGCAGGCGTGCCGCAC
GGAATCGGCCACAAGAAGAGGACCCGTGAGAGTGGTGAAGACACCAAGAC
TAATGATCTCCCTGAGGTCGCGGGTGTGCCGCACGGCATCGGCCAGAAGA
AGAGAAACCGTGCTGCCCTCGAGGATGAGACAGACACGGAGAATGTGCCG
CCTGTCGACTTGACCGCGGACGCGCGCAGTGCTAAGCGAATGAAGATGAC
CTCGCCCTCTCCGCTCAAGGCGCCCACTCTGAGTGCTCGCAAAGTTGCAG
CCCCTAGCCCAACCAAAGCTGCGACTCCCAGTCCCACCAAGCCTCGCTCG
CATACTCCTCTACGGTCGGCCACGACCAGCCGCATGAGCACTCCGGGCAT
CAGCACTCCGGCCAGTGTGCGTGCACGCAACCGGGGTGTGCTGAGCGTCA
GCCGCTTGAACATGCTGGCGCAGCCGAAGAACCGTGGCTGATTAAATGAG
ACTAACATTGATTGCATTTTTGAGCGTTGGACGCATGGTACTTACTGCGA
CATTTCTTGTTGATGCTTCTTTTCTTTGGCGGCTGCCGTGTATTTAGTGC
TCCGGATTGGTGTCTGTGGGACTTTGATTCTTGTGAAATTGTAGGCGCTG
GGATGCATCCGATATGCAAGGCGTTCATGATTTGATTGTTTGCTGAATAA
AGAGATTGAGACTGTATTATATTCAATTTGGTAACCAGTTAGTTGATCAA
CCATACGATGATGTATGCGATAACACTAGTTCAGCAGCTTGTTCTTGTGT
TGATACGCGGG back to topCoding sequence (CDS) from alignment at ch8:830194..833004+ >KJC3_011508-T1 ID=KJC3_011508-T1|Name=KJC3_011508-T1|organism=Aspergillus niger KJC3|type=CDS|length=4656bp|location=Sequence derived from alignment at ch8:830194..833004+ (Aspergillus niger KJC3)
ATGGCGGTTCGACGGTCCGCCCGCCTGCGCAGCCGCCAGGCCACCGAGGA
GCCTGAGGCCCCTGCCGACCCCGTCGTCACTGACAGCAACGCCCCCTGCG
ACACGAACAATCACAACAACTCCGAGAACACGTCCGAAATCGATACAACC
ATGGCTCGTCTCGGCAAACAGCCGGAGAGATTGCCTCCCGTCGTGGAGCA
CGAGGAGCCAGCTGATGCTGCTAAGGATGTCCCCGTGCAGCGGTCGCGGA
AGAAGACCAAGACCGAGACCGCGTCTAAGAGAAGGTCCAAGGTTGAAGCT
AAAGAGCCTGTTGCTGAGGTGACTCCGGTGATCGCTGAGTCTCAGTCCAA
CACGGATACGACTGAACCTGCCGTTGCTGAGACAGAAAAGAAGCCTACTC
CCAAGGCTGTGCCTGAACCTGCTGTTGCTGAGACCGAAAAGAACCCTACC
CCCAAGGCTCTACCTGAAACTGCCTCCAAGCTATCGACTCCTAAGAAATC
TATCCCAACTCTCAAGGGCACACCTGTCCACAGAAACACGCCCGTCCACA
GAAGCACTCCCGTCCACAAAAGCACACCCACCAGAACCCCCTCCAGCACC
CTCGTGCGCCCGTCCCACCAAGAAATGCACCCCAGCAAGGTCCGCCAGAG
CACCACCAAGCAGGCAGACTCCGGTTTGATCCTGGGCTTCAAGCCCATCA
AGAAGGACGCCGAAGGCAAGGTGATTAAGGACACTCTCGCCGACAACACT
CCTACCAAAGCCAAGGCCTCACCCGCTCCCTATTACGGCACCCCCGCGTT
CGAATTTAAGTTTTCCTGCGAATCGCAGCTCAGTGACGAGGCCAAGAAGC
TCATGGAGACCGTGCGCGAGGATGCTGCTAAGATCAAAGCCCAGATGACC
CTGGAGCCCGACCAGAATCGCGCTGAGGCAGCGGACCGGAAGATCGTACA
GCCCAAGGGCAAGGCCAGTCGTTTCAGCGACGTGCACATGGCCGAATTCA
AGAAGATGGACTCCATTGCTGGTCATGCGTCGGCTTTCCGTGCCACCCCA
GGACGCTTCCAGCCAGTGGTCAAGACGCTCAAGAGAACCAACTCCAAGGC
GCGTTTGGACGAATCGGACCGCAACTCGCCATCGCCATCCAAGATTGCAC
GTCCTTCACCTGCCATTGTTGCCCCTGCTAGCAACAAACGCGTCAAGCAT
GACAAGGCCGATGATGCATCGACGCGTCGTCCCACTGCAGCCAGTCCTCC
TAAGCCTGTGCAACCCCGGCCCAGATCTACAGTGCGCAGCTCGTTGATGA
CCCCGACGCGGTCCTCTGCGGCGCGTGCTTCTTCCGTTACCGCAAGACCG
CCCCGCACCTCGATGATCCCATCGCTCGTCCGGTCTCCTGCTGCGAAGCC
GGCCGATGTGCCGCGCACGCCTCAGACAGAGTTCAACCCTCGGCTGAAGA
GCAACTTGCCCACTTTGGGTAACCTGAAGTCGATCCTCCGCCGCCACCAG
CCTTTGTTCTCCAAGGATCCTTCTAAGATTGCCGCGGGCACCCATGTGGC
TGCTCCCGACTTTACCTCGAACCTGCTGTTCGGATCGCGAGGCACCACGG
AGGAGCCTGCACAGACGCCGTCCCCCAAGAAGCGCGTGGAGTTCACTCCT
AGTGTCAAGGCCCGCCACGAGGAGGTTATGTTCTCGCCGTCTCCATCGAA
GGTTCCGGTTGCCAGTCCCTCGCGGACCACTTCCGACGTTGTCTATCCCA
CCCTGCCGGTGTTGACTCCGGAGCAGAACAGGGTCAGCGCCAAGTCTCCT
GCCCAAGCGACAACCCCGACCATCCGCCATGTCCGCCCGTCAGATGTCCA
TGCCAATCCCCTGCCTGAGGTTGCAGGCGTGCCGCACGGAATCGGCCACA
AGAAGAGGACCCGTGAGAGTGGTGAAGACACCAAGACTAATGATCTCCCT
GAGGTCGCGGGTGTGCCGCACGGCATCGGCCAGAAGAAGAGAAACCGTGC
TGCCCTCGAGGATGAGACAGACACGGAGAATGTGCCGCCTGTCGACTTGA
CCGCGGACGCGCGCAGTGCTAAGCGAATGAAGATGACCTCGCCCTCTCCG
CTCAAGGCGCCCACTCTGAGTGCTCGCAAAGTTGCAGCCCCTAGCCCAAC
CAAAGCTGCGACTCCCAGTCCCACCAAGCCTCGCTCGCATACTCCTCTAC
GGTCGGCCACGACCAGCCGCATGAGCACTCCGGGCATCAGCACTCCGGCC
AGTGTGCGTGCACGCAACCGGGGTGTGCTGAGCGTCAGCCGCTTGAACAT
GCTGGCGCAGCCGAAGAACCGTGGCTGAATGGCGGTTCGACGGTCCGCCC
GCCTGCGCAGCCGCCAGGCCACCGAGGAGCCTGAGGCCCCTGCCGACCCC
GTCGTCACTGACAGCAACGCCCCCTGCGACACGAACAATCACAACAACTC
CGAGAACACGTCCGAAATCGATACAACCATGGCTCGTCTCGGCAAACAGC
CGGAGAGATTGCCTCCCGTCGTGGAGCACGAGGAGCCAGCTGATGCTGCT
AAGGATGTCCCCGTGCAGCGGTCGCGGAAGAAGACCAAGACCGAGACCGC
GTCTAAGAGAAGGTCCAAGGTTGAAGCTAAAGAGCCTGTTGCTGAGGTGA
CTCCGGTGATCGCTGAGTCTCAGTCCAACACGGATACGACTGAACCTGCC
GTTGCTGAGACAGAAAAGAAGCCTACTCCCAAGGCTGTGCCTGAACCTGC
TGTTGCTGAGACCGAAAAGAACCCTACCCCCAAGGCTCTACCTGAAACTG
CCTCCAAGCTATCGACTCCTAAGAAATCTATCCCAACTCTCAAGGGCACA
CCTGTCCACAGAAACACGCCCGTCCACAGAAGCACTCCCGTCCACAAAAG
CACACCCACCAGAACCCCCTCCAGCACCCTCGTGCGCCCGTCCCACCAAG
AAATGCACCCCAGCAAGGTCCGCCAGAGCACCACCAAGCAGGCAGACTCC
GGTTTGATCCTGGGCTTCAAGCCCATCAAGAAGGACGCCGAAGGCAAGGT
GATTAAGGACACTCTCGCCGACAACACTCCTACCAAAGCCAAGGCCTCAC
CCGCTCCCTATTACGGCACCCCCGCGTTCGAATTTAAGTTTTCCTGCGAA
TCGCAGCTCAGTGACGAGGCCAAGAAGCTCATGGAGACCGTGCGCGAGGA
TGCTGCTAAGATCAAAGCCCAGATGACCCTGGAGCCCGACCAGAATCGCG
CTGAGGCAGCGGACCGGAAGATCGTACAGCCCAAGGGCAAGGCCAGTCGT
TTCAGCGACGTGCACATGGCCGAATTCAAGAAGATGGACTCCATTGCTGG
TCATGCGTCGGCTTTCCGTGCCACCCCAGGACGCTTCCAGCCAGTGGTCA
AGACGCTCAAGAGAACCAACTCCAAGGCGCGTTTGGACGAATCGGACCGC
AACTCGCCATCGCCATCCAAGATTGCACGTCCTTCACCTGCCATTGTTGC
CCCTGCTAGCAACAAACGCGTCAAGCATGACAAGGCCGATGATGCATCGA
CGCGTCGTCCCACTGCAGCCAGTCCTCCTAAGCCTGTGCAACCCCGGCCC
AGATCTACAGTGCGCAGCTCGTTGATGACCCCGACGCGGTCCTCTGCGGC
GCGTGCTTCTTCCGTTACCGCAAGACCGCCCCGCACCTCGATGATCCCAT
CGCTCGTCCGGTCTCCTGCTGCGAAGCCGGCCGATGTGCCGCGCACGCCT
CAGACAGAGTTCAACCCTCGGCTGAAGAGCAACTTGCCCACTTTGGGTAA
CCTGAAGTCGATCCTCCGCCGCCACCAGCCTTTGTTCTCCAAGGATCCTT
CTAAGATTGCCGCGGGCACCCATGTGGCTGCTCCCGACTTTACCTCGAAC
CTGCTGTTCGGATCGCGAGGCACCACGGAGGAGCCTGCACAGACGCCGTC
CCCCAAGAAGCGCGTGGAGTTCACTCCTAGTGTCAAGGCCCGCCACGAGG
AGGTTATGTTCTCGCCGTCTCCATCGAAGGTTCCGGTTGCCAGTCCCTCG
CGGACCACTTCCGACGTTGTCTATCCCACCCTGCCGGTGTTGACTCCGGA
GCAGAACAGGGTCAGCGCCAAGTCTCCTGCCCAAGCGACAACCCCGACCA
TCCGCCATGTCCGCCCGTCAGATGTCCATGCCAATCCCCTGCCTGAGGTT
GCAGGCGTGCCGCACGGAATCGGCCACAAGAAGAGGACCCGTGAGAGTGG
TGAAGACACCAAGACTAATGATCTCCCTGAGGTCGCGGGTGTGCCGCACG
GCATCGGCCAGAAGAAGAGAAACCGTGCTGCCCTCGAGGATGAGACAGAC
ACGGAGAATGTGCCGCCTGTCGACTTGACCGCGGACGCGCGCAGTGCTAA
GCGAATGAAGATGACCTCGCCCTCTCCGCTCAAGGCGCCCACTCTGAGTG
CTCGCAAAGTTGCAGCCCCTAGCCCAACCAAAGCTGCGACTCCCAGTCCC
ACCAAGCCTCGCTCGCATACTCCTCTACGGTCGGCCACGACCAGCCGCAT
GAGCACTCCGGGCATCAGCACTCCGGCCAGTGTGCGTGCACGCAACCGGG
GTGTGCTGAGCGTCAGCCGCTTGAACATGCTGGCGCAGCCGAAGAACCGT
GGCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011508-T1.utr5p1 | KJC3_011508-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011508-T1.utr3p1 | KJC3_011508-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:830194..833004 + |
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