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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:847479..850198+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011513-T2 ID=KJC3_011513-T2|Name=KJC3_011513-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2720bp|location=Sequence derived from alignment at ch8:847479..850198+ (Aspergillus niger KJC3)
CTCCTTCCACTGCCACATCAGCCAGGTTACACACACAGAATATCCCACCG
CTTCAGCGGGTGAGCTTTATAGTATATACATAGTATATCTCATTTAACGC
TGGTCGCCAGGGATCCGTTAGCGTTGCTGCGAGGATCACACAAACGGAGT
CGATCCTGATTAGGCGTTCCTCTTGCCGCCAGCCGATCTCTCATCCCACG
TCGCCTGTCTTCTCCGTCTTCTTTCTCCTCCCTCGCAATCATCGTGTCAC
CTATTATTATTGTTCCACCAGGTATGTGCTCTCACTGACGATTGCTGAGC
TATCTGACCTCCTATCTCGATCTAGACGCGCTGGATTCCAGCGCCTGCCT
TGTCGTCTGATCATGTCGCCTCGATCGCAAATGCGCCTCCACTAGCCATC
AACAAGCGATATATATATTATATAAACACCTATCGAAGCCTAATTTATTC
TTAACGACCGCCTACCATGGACGAGGGACCTCCTCCACCCCCTCCCCCTC
ACGGCGAGAAGCCACAAACCACCCAGGGCGAATATCGCAAGACTTCCGAC
CTCCCTCCTGGCAACTACGACATCTTTATCATCCCCCCTCACTCCGCCGG
CTCCGGATTCCTCTACCTCCCTTCCCTCCAGCCACAACGCAATAGCTTCA
TCGCGGGGTCCGCCTGCACACTCTTTGTTGTCCTACTTTGGACCCTCCTA
TCACCCCTTCTAAAAGCCTGGTACGCTGCCACCGTCGCCAGTGGCAGCGG
CATGGCCATCGCCGTGCTGGCTATCGGAGTTGGGGTCGCCGGGTGGGCCG
TGGGCGCCTCACAATCAGATTCTGGGGGAGGCCGACGACGGGCCAATTTT
GGATTTAGCACCGGCGGGGGTCCAGGCGCGGGTGGACCCTCCGGCAATGG
CGCCGGAGGTGAGTATGCGCGGGGACAGCAGTATGGGGCCCAAAATCAGG
GCCCGAACGGTCACAATGGTGGACAGGGACAGGGACAGGGACAGCAGCAA
TATGGGGGCAACTTCAACTCGGGTCCGCCTCCGGGTGCAGGCCAGTATGG
CGGGAACCATCAATACCAGAACACTGGTGGGCCCGGAAGTGGACCACCCC
CGCAACCGCCGCCGCAGGCAGGCGGATCAAATAAGACAGGTTCGTCTGCC
ACCGGCTCTGAAAGCAAACCTCAAAGTGGAGCTGATTGGGAGAAGGCCCG
TGAAGAGACCCGGCGCAAGGAGGAGCTGCGCCGCAAGATGGAGGAGTTTA
AGCGAAAGCGGGAAGCCGAGCAGCGCGAGAAGCAGCAGAAGCGCGAGCGC
GAGGCCATGGAGCGGGAGCTGCGGGAGCGCAGAGAGCAGCTCGAGAAGGA
GATGGCTGCCGCCAAGGAGGCGGCCGCCCGTGAGGCCCGAGAACGGGCGG
AGCGCGAAGCAGCCGAAGCCAAAGCCAAAGCGGAGCGAGAGGCCGCGGAA
GCTCGAGCCAAGGCGGAACGAGAAGCAGCGGAAGCGCGTGCCAAGGCGGA
GCGTGAAGCTGCGGAGGCCAAAGCTAAAGCGGAGAAAGAGGCCCGAGAGG
CCCGCGAGCGAGAAGCACGTCGGGCAAAAGAAGCCCGAGAACGAGAGGCG
CGACGCGCCGCCGAAGCCAAGGCCCGTGCTGAGCGCGAGGCCGCGGAGGC
CAAGGCTAAAGCAGAGCGTGAAGCTGCTGAGGCAAAGGCCAAGGCAGAGA
AGGAGGAAGAGGAGCGTAAAGCTGCAGCTAAGAAGGAAGCTGATGCTAAG
TTCGCGGCGCTCAAAGAGGCTGCCGCGAAGAAGTATGCCGAGAAGAAAGC
CAAAGATGCGCAGGAGGCAGCGGCCAAAGAAGCGGCCAGCCAAAAGGCAT
CTAGCACGTCCACTCCCCGCACTCCATCACCCAAGAAACCTGCTTATTCC
CGCACCGATACCGACAGCTCATATTCCAATTTTCGACCGACTGACCGTCC
CCGCCGGCCGTACGGCGGCGCCACCTCTGGGTCATCAGTGTACTCGGACT
CTTCATACGCGCCGTCACAGACAACAGCACGCACGACCCCACCACCATCA
AATCGCGGGGCCTATGAAACCAAAGATCCTGACAAGATTGTCATCAAGGG
CGTGTTCGAGTTCAACAACAACTTTGTGCGCAGCCCTGTGGCGCAACTTG
TCTCAGGCCAGGGCATGGTCAGCGACGGATTGGTTCTGAGGATCACGACA
GAAGGCCTCTTCATCGACGACGACGTGCGCGGTGTCGGTCAGCGGGAATG
GGATGTGAAGGCGTGGACGATGAACCTCGTTGAGGTATGGTGTCCGAAAT
TCGGGGCGCAGCGCCAACCACCGAAGCCCCCGCCGGGGCCATTCAATCGG
CGCGGGAATGAACCGACCCCAGAGGAATCGGAAGCATTCCTCGGCAACCT
GCTCAAGATGTGCAAGAACACGTGCCGATTATCAACAGGCGGAGGAGAGG
ATCAGCGCACGCTGCATGTGTTGCGGGCGTCGGTGCGTGACCACGAGGGC
AAACGGTATGTGTTTGTGTTGCAGGAGACGGAGGGGTGGAAGGTGGCGAT
TGGATTGCAGCGGTTGCGACGGGGGACGTTGTCGCGGGCATTAGGGGTGA
TGGGGTTGGGAGTGAATGAGAGTCGGATGATATTATCAGGATTAGGATAT
GAGTGATGATACCTTATGTATATACCAGCCAGTCAGTCTTTAGCACATAA
TTATCAAACTTTCCAGTTTA back to topCoding sequence (CDS) from alignment at ch8:847479..850198+ >KJC3_011513-T2 ID=KJC3_011513-T2|Name=KJC3_011513-T2|organism=Aspergillus niger KJC3|type=CDS|length=3408bp|location=Sequence derived from alignment at ch8:847479..850198+ (Aspergillus niger KJC3)
ATGGCGCCGGAGGTGAGTATGCGCGGGGACAGCAGTATGGGGCCCAAAAT
CAGGGCCCGAACGGTCACAATGGTGGACAGGGACAGGGACAGGGACAGCA
GCAATATGGGGGCAACTTCAACTCGGGTCCGCCTCCGGGTGCAGGCCAGT
ATGGCGGGAACCATCAATACCAGAACACTGGTGGGCCCGGAAGTGGACCA
CCCCCGCAACCGCCGCCGCAGGCAGGCGGATCAAATAAGACAGGCCCGTG
AAGAGACCCGGCGCAAGGAGGAGCTGCGCCGCAAGATGGAGGAGTTTAAG
CGAAAGCGGGAAGCCGAGCAGCGCGAGAAGCAGCAGAAGCGCGAGCGCGA
GGCCATGGAGCGGGAGCTGCGGGAGCGCAGAGAGCAGCTCGAGAAGGAGA
TGGCTGCCGCCAAGGAGGCGGCCGCCCGTGAGGCCCGAGAACGGGCGGAG
CGCGAAGCAGCCGAAGCCAAAGCCAAAGCGGAGCGAGAGGCCGCGGAAGC
TCGAGCCAAGGCGGAACGAGAAGCAGCGGAAGCGCGTGCCAAGGCGGAGC
GTGAAGCTGCGGAGGCCAAAGCTAAAGCGGAGAAAGAGGCCCGAGAGGCC
CGCGAGCGAGAAGCACGTCGGGCAAAAGAAGCCCGAGAACGAGAGGCGCG
ACGCGCCGCCGAAGCCAAGGCCCGTGCTGAGCGCGAGGCCGCGGAGGCCA
AGGCTAAAGCAGAGCGTGAAGCTGCTGAGGCAAAGGCCAAGGCAGAGAAG
GAGGAAGAGGAGCGTAAAGCTGCAGCTAAGAAGGAAGCTGATGCTAAGTT
CGCGGCGCTCAAAGAGGCTGCCGCGAAGAAGTATGCCGAGAAGAAAGCCA
AAGATGCGCAGGAGGCAGCGGCCAAAGAAGCGGCCAGCCAAAAGGCATCT
AGCACGTCCACTCCCCGCACTCCATCACCCAAGAAACCTGCTTATTCCCG
CACCGATACCGACAGCTCATATTCCAATTTTCGACCGACTGACCGTCCCC
GCCGGCCGTACGGCGGCGCCACCTCTGGGTCATCAGTGTACTCGGACTCT
TCATACGCGCCGTCACAGACAACAGCACGCACGACCCCACCACCATCAAA
TCGCGGGGCCTATGAAACCAAAGATCCTGACAAGATTGTCATCAAGGGCG
TGTTCGAGTTCAACAACAACTTTGTGCGCAGCCCTGTGGCGCAACTTGTC
TCAGGCCAGGGCATGGTCAGCGACGGATTGGTTCTGAGGATCACGACAGA
AGGCCTCTTCATCGACGACGACGTGCGCGGTGTCGGTCAGCGGGAATGGG
ATGTGAAGGCGTGGACGATGAACCTCGTTGAGGTATGGTGTCCGAAATTC
GGGGCGCAGCGCCAACCACCGAAGCCCCCGCCGGGGCCATTCAATCGGCG
CGGGAATGAACCGACCCCAGAGGAATCGGAAGCATTCCTCGGCAACCTGC
TCAAGATGTGCAAGAACACGTGCCGATTATCAACAGGCGGAGGAGAGGAT
CAGCGCACGCTGCATGTGTTGCGGGCGTCGGTGCGTGACCACGAGGGCAA
ACGGTATGTGTTTGTGTTGCAGGAGACGGAGGGGTGGAAGGTGGCGATTG
GATTGCAGCGGTTGCGACGGGGGACGTTGTCGCGGGCATTAGGGGTGATG
GGGTTGGGAGTGAATGAGAGTCGGATGATATTATCAGGATTAGGATATGA
GTGAATGGCGCCGGAGGTGAGTATGCGCGGGGACAGCAGTATGGGGCCCA
AAATCAGGGCCCGAACGGTCACAATGGTGGACAGGGACAGGGACAGGGAC
AGCAGCAATATGGGGGCAACTTCAACTCGGGTCCGCCTCCGGGTGCAGGC
CAGTATGGCGGGAACCATCAATACCAGAACACTGGTGGGCCCGGAAGTGG
ACCACCCCCGCAACCGCCGCCGCAGGCAGGCGGATCAAATAAGACAGGCC
CGTGAAGAGACCCGGCGCAAGGAGGAGCTGCGCCGCAAGATGGAGGAGTT
TAAGCGAAAGCGGGAAGCCGAGCAGCGCGAGAAGCAGCAGAAGCGCGAGC
GCGAGGCCATGGAGCGGGAGCTGCGGGAGCGCAGAGAGCAGCTCGAGAAG
GAGATGGCTGCCGCCAAGGAGGCGGCCGCCCGTGAGGCCCGAGAACGGGC
GGAGCGCGAAGCAGCCGAAGCCAAAGCCAAAGCGGAGCGAGAGGCCGCGG
AAGCTCGAGCCAAGGCGGAACGAGAAGCAGCGGAAGCGCGTGCCAAGGCG
GAGCGTGAAGCTGCGGAGGCCAAAGCTAAAGCGGAGAAAGAGGCCCGAGA
GGCCCGCGAGCGAGAAGCACGTCGGGCAAAAGAAGCCCGAGAACGAGAGG
CGCGACGCGCCGCCGAAGCCAAGGCCCGTGCTGAGCGCGAGGCCGCGGAG
GCCAAGGCTAAAGCAGAGCGTGAAGCTGCTGAGGCAAAGGCCAAGGCAGA
GAAGGAGGAAGAGGAGCGTAAAGCTGCAGCTAAGAAGGAAGCTGATGCTA
AGTTCGCGGCGCTCAAAGAGGCTGCCGCGAAGAAGTATGCCGAGAAGAAA
GCCAAAGATGCGCAGGAGGCAGCGGCCAAAGAAGCGGCCAGCCAAAAGGC
ATCTAGCACGTCCACTCCCCGCACTCCATCACCCAAGAAACCTGCTTATT
CCCGCACCGATACCGACAGCTCATATTCCAATTTTCGACCGACTGACCGT
CCCCGCCGGCCGTACGGCGGCGCCACCTCTGGGTCATCAGTGTACTCGGA
CTCTTCATACGCGCCGTCACAGACAACAGCACGCACGACCCCACCACCAT
CAAATCGCGGGGCCTATGAAACCAAAGATCCTGACAAGATTGTCATCAAG
GGCGTGTTCGAGTTCAACAACAACTTTGTGCGCAGCCCTGTGGCGCAACT
TGTCTCAGGCCAGGGCATGGTCAGCGACGGATTGGTTCTGAGGATCACGA
CAGAAGGCCTCTTCATCGACGACGACGTGCGCGGTGTCGGTCAGCGGGAA
TGGGATGTGAAGGCGTGGACGATGAACCTCGTTGAGGTATGGTGTCCGAA
ATTCGGGGCGCAGCGCCAACCACCGAAGCCCCCGCCGGGGCCATTCAATC
GGCGCGGGAATGAACCGACCCCAGAGGAATCGGAAGCATTCCTCGGCAAC
CTGCTCAAGATGTGCAAGAACACGTGCCGATTATCAACAGGCGGAGGAGA
GGATCAGCGCACGCTGCATGTGTTGCGGGCGTCGGTGCGTGACCACGAGG
GCAAACGGTATGTGTTTGTGTTGCAGGAGACGGAGGGGTGGAAGGTGGCG
ATTGGATTGCAGCGGTTGCGACGGGGGACGTTGTCGCGGGCATTAGGGGT
GATGGGGTTGGGAGTGAATGAGAGTCGGATGATATTATCAGGATTAGGAT
ATGAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011513-T2.utr3p1 | KJC3_011513-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:847479..850198 + |
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