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KJC3_011527-T1, KJC3_011527-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011527-T1
Unique NameKJC3_011527-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:896577..899160-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011527-T1 ID=KJC3_011527-T1|Name=KJC3_011527-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2584bp|location=Sequence derived from alignment at ch8:896577..899160- (Aspergillus niger KJC3)
GGATTTGTTTGGGCGCTACGGGTTGTTTGAATTCTTTCGCTGAACAGAAA
AAAGCCGGCATGTGAAGACGCCAGAGCGTACTTGATAATATTAATATTAA
TGTATACAATAATGTTTCCTTTCTAGACAATATACAGACCCTCGCTGGAC
CCGGAGATCTTGCTCGGATGGCGTTTACATTCTTGGATATTAAGAAAAAT
TCTCTGCTAATCAGACATCAATGGCTGGTCGAGTTGCAATAAAAGGTTCG
TTTGCTATTCTTGAATATGTATGTATGCGACCGTGGAAAAGTCATATTTT
GAAATTTGAGTACTAATAGTAGGGAGTGCCTGGACTGTCTGGGGGAAGAC
TGGGTCTCTATCTAGTGTCGCGATACAGTATTTGCGGGGTGGACTTAGCA
TGGTGTCGATGGAACATGACGGCACCAATTACCACAATGAAATATACCAT
CCCTAGGGGTAAGTACACCACTGCCGATGTAAGTAGTTGTAATACCGAGC
CAACCTATCCGAACTCCATCGCACAACCCAAATCCACATGGACTTCAGGA
CTGGCATCATAATACTAAGAAAACCATCAGGGAAATCGTAGGGCCCCTTG
ACGATCCGGAACGGTTCACGTGACCTACAAGCCACGGGCGTTAGGGCTGT
GGCCCTCGAACGGGGCTCTTCCCGCACAAAGAGGAAGTAGCGCCGCTCGC
TTAGCGACGACCAGCGAACTCATCCGACATCGTTGTGTGCGTTGAACCTG
CCCACCAACGACAACAACCGCCGACAACATACATCCCAAGGGAGTATCCT
AGAGCAGCGCTCTTCCTTTCGCTGGATATATCCTTTTTGAACCGGTGACA
GAGAGCAGGATGTCCGCCATCGAGCCAGTCGTGCGTACCGCCCCATCCCG
AAACTATCATCCACATACAATCTCCTTGAAATTGAATACACATGTGTCAA
ATGAGGGCGTCACGGTCCTGGAGTCGGAAATTCATATACCAAAGTACATT
TGTCGCTGACTTGAATTGTTGGGTTTTCGCAGGTCGTCATTGACGGCAAG
GGACACCTCTTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAA
CGGTCAGAAGATCGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCG
AGTTCTTCCGTGCGAAGCGTATGTTCTATCCGACCCGGTTTCTTTCGATT
TCATTTTGCAATATGGATTTTCTTTGGGATGAATGGGAGTGCGACGGTTT
TCGACATATGGAGGAGGACATCGGCAATTGATTGGAATATTTATGGAGGA
ACAAGCAACACATGTGTGCTGGTGGACAACGGGCTGACCTGGATTTCGCG
ATATAGTCAAGTACCACGCCTACCTTCGCAAGATGACTCGTTTCAACCCC
ACCCGCGGAGGTGAGACTACCCGATGACTTTCCCCCTTCGATGGGGAAAG
ACGACACTTATCTCTTTTGCGGGACTCCGTGCTGAATCGCTACAGGTCCC
TTCCACTTCCGTGCCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGGCAT
GATCCCCCACAAGACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGAAGG
TTTTCGAGGGTGTTCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTCGTT
CCCCAGGCTCTGCGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTGCAC
CGTTGGTCGTCTCAGCCACGAGGTTGGCTGGAAGTACCAGGACGTTGTTG
CCAGGTACGTTTATGCTGAAGTGGAGAGGATAAAATGGGAGATGTTGGAA
TATTGGGTGCAGAAGGCTAACGGATTCGTTTTTTCTACTCGTACAGACTT
GAGGAGCGCAGAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGAAGGC
CGCTCGCCGCCAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAACGAGC
AGACCAAGAGCCAGCTCGCTCAGTACGGATACTAGATACCTAGTTGCGCG
GCTGGTTGCTTGTGTTTGTGATGGGATGGGATGGGATCGCGAAACGGTTC
TCTGCGAAGAAAATGGACAGCAAGCCGATCGACCTTTTTCTCACTGTCCC
TACCTTTTCATGAAATACCACAATTCTTACGTTGTGACGCACATGGAGGC
TGGAGAGATCGATTCTTTCTACAAAAAAAATACAGGAGTCACTTGGGATG
AAAGGTTGTTCAAAATAGCTGACCCGTTATTTCGCGCCGTGGCGGTTTAA
TCCAAGAATTTCTTTTCAAGAGTTCAAATGACTTTGCTGTGACGAATCCG
ATGCACCATTTACCACCGCTATTACTACTACTACTGGCCCCTTGCAATTT
TGTGTATTTCTAGGCCCCCGGACACGGAGAGAGAGACAGAGTACTGCCTA
TCTTGTACTTGATTTGCGATATGCGACTACCCAGGATGCCGGACGAGGCT
CCATGTTGATCACCTATGCCGTGCCCACACGATGCTGCCCTATCTTATTC
CTGTGTAAAATGTTACCCTGAGCGCCACCGATTACCAGCCCCGATGATGT
ATAGCCGGTCACTACCTGCGTAGAGGGAACCGTA
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Coding sequence (CDS) from alignment at ch8:896577..899160-

>KJC3_011527-T1 ID=KJC3_011527-T1|Name=KJC3_011527-T1|organism=Aspergillus niger KJC3|type=CDS|length=3864bp|location=Sequence derived from alignment at ch8:896577..899160- (Aspergillus niger KJC3)
GTCCCTTCCACTTCCGTGCCCCCTCCCGCATCTTCTACAAGGCTGTCCGC
GGCATGATCCCCCACAAGACCGCCCGTGGTGCCGCCGCTATGGAGCGCCT
GAAGGTTTTCGAGGGTGTTCCTCCCCCCTACGACAAGAAGAAGCGCGTTG
TCGTTCCCCAGGCTCTGCGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTAC
TGCACCGTTGGTCGTCTCAGCCACGAGGTTGGCTGGAAGTACCAGGACGT
TGTTGCCAGGTACGTTTATGCTGAAGTGGAGAGGATAAAATGGGAGATGT
TGGAATATTGGGTGCAGAAGGCTAACGGATTCGTTTTTTCTACTCGTACA
GACTTGAGGAGCGCAGAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAG
AAGGCCGCTCGCCGCCAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAA
CGAGCAGACCAAGAGCCAGCTCGCTCAGTACGGATACTAGATACCTAGTT
GCGCGGCTGGTTGCTTGTGTTTGTGATGGGATGGGATGGGATCGCGAAAC
GGTTCTCTGCGAAGAAAATGGACAGCAAGCCGATCGACCTTTTTCTCACT
GTCCCTACCTTTTCATGAAATACCACAATTCTTACGTTGTGACGCACATG
GAGGCTGGAGAGATCGATTCTTTCTACAAAAAAAATACAGGAGTCACTTG
GGATGAAAGGTTGTTCAAAATAGCTGACCCGTTATTTCGCGCCGTGGCGG
TTTAATCAAGTACCACGCCTACCTTCGCAAGATGACTCGTTTCAACCCCA
CCCGCGGAGGTCGTCATTGACGGCAAGGGACACCTCTTGGGTCGCCTGGC
CAGCACTGTTGCTAAGCAGCTGCTCAACGGTCAGAAGATCGTCGTCGTGA
GATGTGAAGCCCTCAACATCTCCGGCGAGTTCTTCCGTGCGAAGCATGTC
CGCCATCGAGCCAGTCGTCCCTTCCACTTCCGTGCCCCCTCCCGCATCTT
CTACAAGGCTGTCCGCGGCATGATCCCCCACAAGACCGCCCGTGGTGCCG
CCGCTATGGAGCGCCTGAAGGTTTTCGAGGGTGTTCCTCCCCCCTACGAC
AAGAAGAAGCGCGTTGTCGTTCCCCAGGCTCTGCGTGTTCTCCGCCTGCG
CCCCGGCCGCAAGTACTGCACCGTTGGTCGTCTCAGCCACGAGGTTGGCT
GGAAGTACCAGGACGTTGTTGCCAGGTACGTTTATGCTGAAGTGGAGAGG
ATAAAATGGGAGATGTTGGAATATTGGGTGCAGAAGGCTAACGGATTCGT
TTTTTCTACTCGTACAGACTTGAGGAGCGCAGAAAGGTTAAGAGCAGTGC
ATACTACGAGCGCAAGAAGGCCGCTCGCCGCCAACTCGTCCACGCCCAGA
AGTCGGCGGGTGTTAACGAGCAGACCAAGAGCCAGCTCGCTCAGTACGGA
TACTAGATACCTAGTTGCGCGGCTGGTTGCTTGTGTTTGTGATGGGATGG
GATGGGATCGCGAAACGGTTCTCTGCGAAGAAAATGGACAGCAAGCCGAT
CGACCTTTTTCTCACTGTCCCTACCTTTTCATGAAATACCACAATTCTTA
CGTTGTGACGCACATGGAGGCTGGAGAGATCGATTCTTTCTACAAAAAAA
ATACAGGAGTCACTTGGGATGAAAGGTTGTTCAAAATAGCTGACCCGTTA
TTTCGCGCCGTGGCGGTTTAATCAAGTACCACGCCTACCTTCGCAAGATG
ACTCGTTTCAACCCCACCCGCGGAGGTCGTCATTGACGGCAAGGGACACC
TCTTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAACGGTCAG
AAGATCGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCGAGTTCTT
CCGTGCGAAGCATGTCCGCCATCGAGCCAGTCGTCCCTTCCACTTCCGTG
CCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCCCCACAAG
ACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCGAGGGTGT
TCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAGGCTCTGC
GTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGGTCGTCTC
AGCCACGAGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGGTACGTTTA
TGCTGAAGTGGAGAGGATAAAATGGGAGATGTTGGAATATTGGGTGCAGA
AGGCTAACGGATTCGTTTTTTCTACTCGTACAGACTTGAGGAGCGCAGAA
AGGTTAAGAGCAGTGCATACTACGAGCGCAAGAAGGCCGCTCGCCGCCAA
CTCGTCCACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAGAGCCA
GCTCGCTCAGTACGGATACTAGATACCTAGTTGCGCGGCTGGTTGCTTGT
GTTTGTGATGGGATGGGATGGGATCGCGAAACGGTTCTCTGCGAAGAAAA
TGGACAGCAAGCCGATCGACCTTTTTCTCACTGTCCCTACCTTTTCATGA
AATACCACAATTCTTACGTTGTGACGCACATGGAGGCTGGAGAGATCGAT
TCTTTCTACAAAAAAAATACAGGAGTCACTTGGGATGAAAGGTTGTTCAA
AATAGCTGACCCGTTATTTCGCGCCGTGGCGGTTTAATCAAGTACCACGC
CTACCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGGAGGTCGTCATT
GACGGCAAGGGACACCTCTTGGGTCGCCTGGCCAGCACTGTTGCTAAGCA
GCTGCTCAACGGTCAGAAGATCGTCGTCGTGAGATGTGAAGCCCTCAACA
TCTCCGGCGAGTTCTTCCGTGCGAAGCATGTCCGCCATCGAGCCAGTCGT
CCCTTCCACTTCCGTGCCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGG
CATGATCCCCCACAAGACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGA
AGGTTTTCGAGGGTGTTCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTC
GTTCCCCAGGCTCTGCGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTG
CACCGTTGGTCGTCTCAGCCACGAGGTTGGCTGGAAGTACCAGGACGTTG
TTGCCAGGTACGTTTATGCTGAAGTGGAGAGGATAAAATGGGAGATGTTG
GAATATTGGGTGCAGAAGGCTAACGGATTCGTTTTTTCTACTCGTACAGA
CTTGAGGAGCGCAGAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGAA
GGCCGCTCGCCGCCAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAACG
AGCAGACCAAGAGCCAGCTCGCTCAGTACGGATACTAGATACCTAGTTGC
GCGGCTGGTTGCTTGTGTTTGTGATGGGATGGGATGGGATCGCGAAACGG
TTCTCTGCGAAGAAAATGGACAGCAAGCCGATCGACCTTTTTCTCACTGT
CCCTACCTTTTCATGAAATACCACAATTCTTACGTTGTGACGCACATGGA
GGCTGGAGAGATCGATTCTTTCTACAAAAAAAATACAGGAGTCACTTGGG
ATGAAAGGTTGTTCAAAATAGCTGACCCGTTATTTCGCGCCGTGGCGGTT
TAATCAAGTACCACGCCTACCTTCGCAAGATGACTCGTTTCAACCCCACC
CGCGGAGGTCGTCATTGACGGCAAGGGACACCTCTTGGGTCGCCTGGCCA
GCACTGTTGCTAAGCAGCTGCTCAACGGTCAGAAGATCGTCGTCGTGAGA
TGTGAAGCCCTCAACATCTCCGGCGAGTTCTTCCGTGCGAAGCATGTCCG
CCATCGAGCCAGTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011527KJC3_011527Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011527-T1KJC3_011527-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011527-T1.cdsKJC3_011527-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011527-T1.utr3p1KJC3_011527-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011527-T1.exon5KJC3_011527-T1.exon5Aspergillus niger KJC3exon
KJC3_011527-T1.exon4KJC3_011527-T1.exon4Aspergillus niger KJC3exon
KJC3_011527-T1.exon3KJC3_011527-T1.exon3Aspergillus niger KJC3exon
KJC3_011527-T1.exon2KJC3_011527-T1.exon2Aspergillus niger KJC3exon
KJC3_011527-T1.exon1KJC3_011527-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011527-T1.utr5p2KJC3_011527-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_011527-T1.utr5p1KJC3_011527-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023563
DBxrefInterPro:IPR036899
DBxrefInterPro:IPR005755
DBxrefInterPro:IPR005822
DBxrefPFAM:PF00572
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:896577..899160 -
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