You are here

Home

KJC3_011532-T1, KJC3_011532-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011532-T1
Unique NameKJC3_011532-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:909449..911173+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011532-T1 ID=KJC3_011532-T1|Name=KJC3_011532-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1725bp|location=Sequence derived from alignment at ch8:909449..911173+ (Aspergillus niger KJC3)
ATGGCAGCCGCGCCAGATATCGATCCATATGAGGTGTTGGGGGTGGCAAG
GGATGCAGCCTTGTCGGATATCAAATCTGCCCATCGCAAGCTCGTGTTGA
AATGTCACCCCGATAAGATCAAAGATGAGTCGCTGAGAAGTCAGGCTCAG
GATGAATTTCAGAAGGTGCAGCAGGCCTACGAGACCCTTTCGGATGAGAC
GAGAAGGGCCAAGTACGATGCGAAGGCTCGGCTGGCTGAGCTACGTCGCC
AAATGCATGAGCAAGGTGTACCGATCAATGGTTCATCTGCCTATGCCGCC
CCGCGCGCAAGTGGCTCGAGTGGCCCTCGCGAGTATCGCAACGGACGGTA
CTACGAGGAGAGGACGCCGGCTGATGCAGCCACCTATTCCGATGACGATC
TCCAATTCTCCGAAGAGTCGCGCTCAACCTCCCGGAAATACGATGAGTAT
AAGAAACGATACTCCTCCAAACCCCCGAGCGAGAAGAAGAAAAGCAAGAG
CGATGGCCCTAGTACTCGTGCGGCGAAGGATATGGCTCGCGACAATTCGA
GGACGACCCACAGCAGTCGTGCCAAATATCGTACCAGGGAACGACAACGG
GATGCCTACGAGAAGTATGAGCGGGCCGTTCCGTACAGCGACTCCGAAGA
CGATGGCGGCGCATCTGATTCCAGCGCCTCGTCCACGGTTTACGTGAAGG
TTAAGCGCCCCTCGGAAAGGCGCAACCGGGAGTCATCTTCTCGCAAGTCC
CGACCGGCTGACCTCCCGCGCCGCCATACCTCGACCCGCTACGAAGACGA
GTACACGGACGACTATGAGTCGAAGCATGACAAGCTACACCACACCGCCA
AAGATTACATTAGGCGCTCCAAGGGAACCGTTCCGATCGAAATCGACAGA
CGTCCACAAGCGTCCCGCTCGCCCCCGCGCAATCATGGCTACGAATCCGC
TGATCCGGAGTCTTCCTCGTCACGACACTCGGGCCGCACGAAACGACCGA
GCAAGGAAAGTGTTCGTACAAGTAATTCTCGCAATGGATCATACGAGAAG
CTTGAGGCCCAGGCCCGGTCCTACGACGTCAAGATACCTAGCATACCGAC
TACGGCAACTTCACCGTCAGTGAAGATTCCTTCATCGGTCCGGCCATCCC
TCCAGCCCTCACGCTCTGCGAGCGCTGCACAATCCTATTCCCGCGCCAGG
GGAATGAGTCGGGAAAATCCACTGCATAACATGGTCCATGAAGCGAGTCG
GACAGCGAAACTGCGAACGGACAAGTACGATTCCGGCTACTCGAGTCCAG
GCACGCCAGAAATGGCAGCCGGCGAGAGTCCGCCCAAGTCGACTCGCTAC
AAGATTGTGACGGAACCGGACACCGTGCTTAGAGAACCCAGTATACCACT
ACCCCAGAAGTCCCCAAGATACGCAAGGGGGGGTTCACCGCCACATCAAG
AGCGCCCTATGCCGAAGCCTCCCGTTCGGAGTAGCACCTACACCTACCCC
ACAGAACACATGCGCTATGAGTCCGCGGCTCGTCCCAGTATGTCCCGGCA
ATCCTCGAGCCGGCCTACGTATGGTGAGATCCGTTCGCCCAAGGACAAAG
AGTACAGGTATGCGCGAGAGGTGGGGCCAGATTACATCCCATCCCGCGAT
GCTTACATGCGACAGCCATACGGGGAGTACCCGGTTCCGCCCCCCGAACG
GCGGCAATCCACATATGCTGGATGA
back to top

Coding sequence (CDS) from alignment at ch8:909449..911173+

>KJC3_011532-T1 ID=KJC3_011532-T1|Name=KJC3_011532-T1|organism=Aspergillus niger KJC3|type=CDS|length=1725bp|location=Sequence derived from alignment at ch8:909449..911173+ (Aspergillus niger KJC3)
ATGGCAGCCGCGCCAGATATCGATCCATATGAGGTGTTGGGGGTGGCAAG
GGATGCAGCCTTGTCGGATATCAAATCTGCCCATCGCAAGCTCGTGTTGA
AATGTCACCCCGATAAGATCAAAGATGAGTCGCTGAGAAGTCAGGCTCAG
GATGAATTTCAGAAGGTGCAGCAGGCCTACGAGACCCTTTCGGATGAGAC
GAGAAGGGCCAAGTACGATGCGAAGGCTCGGCTGGCTGAGCTACGTCGCC
AAATGCATGAGCAAGGTGTACCGATCAATGGTTCATCTGCCTATGCCGCC
CCGCGCGCAAGTGGCTCGAGTGGCCCTCGCGAGTATCGCAACGGACGGTA
CTACGAGGAGAGGACGCCGGCTGATGCAGCCACCTATTCCGATGACGATC
TCCAATTCTCCGAAGAGTCGCGCTCAACCTCCCGGAAATACGATGAGTAT
AAGAAACGATACTCCTCCAAACCCCCGAGCGAGAAGAAGAAAAGCAAGAG
CGATGGCCCTAGTACTCGTGCGGCGAAGGATATGGCTCGCGACAATTCGA
GGACGACCCACAGCAGTCGTGCCAAATATCGTACCAGGGAACGACAACGG
GATGCCTACGAGAAGTATGAGCGGGCCGTTCCGTACAGCGACTCCGAAGA
CGATGGCGGCGCATCTGATTCCAGCGCCTCGTCCACGGTTTACGTGAAGG
TTAAGCGCCCCTCGGAAAGGCGCAACCGGGAGTCATCTTCTCGCAAGTCC
CGACCGGCTGACCTCCCGCGCCGCCATACCTCGACCCGCTACGAAGACGA
GTACACGGACGACTATGAGTCGAAGCATGACAAGCTACACCACACCGCCA
AAGATTACATTAGGCGCTCCAAGGGAACCGTTCCGATCGAAATCGACAGA
CGTCCACAAGCGTCCCGCTCGCCCCCGCGCAATCATGGCTACGAATCCGC
TGATCCGGAGTCTTCCTCGTCACGACACTCGGGCCGCACGAAACGACCGA
GCAAGGAAAGTGTTCGTACAAGTAATTCTCGCAATGGATCATACGAGAAG
CTTGAGGCCCAGGCCCGGTCCTACGACGTCAAGATACCTAGCATACCGAC
TACGGCAACTTCACCGTCAGTGAAGATTCCTTCATCGGTCCGGCCATCCC
TCCAGCCCTCACGCTCTGCGAGCGCTGCACAATCCTATTCCCGCGCCAGG
GGAATGAGTCGGGAAAATCCACTGCATAACATGGTCCATGAAGCGAGTCG
GACAGCGAAACTGCGAACGGACAAGTACGATTCCGGCTACTCGAGTCCAG
GCACGCCAGAAATGGCAGCCGGCGAGAGTCCGCCCAAGTCGACTCGCTAC
AAGATTGTGACGGAACCGGACACCGTGCTTAGAGAACCCAGTATACCACT
ACCCCAGAAGTCCCCAAGATACGCAAGGGGGGGTTCACCGCCACATCAAG
AGCGCCCTATGCCGAAGCCTCCCGTTCGGAGTAGCACCTACACCTACCCC
ACAGAACACATGCGCTATGAGTCCGCGGCTCGTCCCAGTATGTCCCGGCA
ATCCTCGAGCCGGCCTACGTATGGTGAGATCCGTTCGCCCAAGGACAAAG
AGTACAGGTATGCGCGAGAGGTGGGGCCAGATTACATCCCATCCCGCGAT
GCTTACATGCGACAGCCATACGGGGAGTACCCGGTTCCGCCCCCCGAACG
GCGGCAATCCACATATGCTGGATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011532KJC3_011532Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011532-T1.exon1KJC3_011532-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011532-T1.cdsKJC3_011532-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011532-T1KJC3_011532-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018253
DBxrefInterPro:IPR036869
DBxrefInterPro:IPR001623
DBxrefPFAM:PF00226
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:909449..911173 +
Powered by Drupal