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KJC3_011537-T1, KJC3_011537-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011537-T1
Unique NameKJC3_011537-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:920517..921555-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011537-T1 ID=KJC3_011537-T1|Name=KJC3_011537-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1039bp|location=Sequence derived from alignment at ch8:920517..921555- (Aspergillus niger KJC3)
CTCTTTCTCACCTTCAATCCAACAACCCCGACCTCAATTCCCATTCTCCC
AGAGAAAGAGAAAAACAAAGAAGACACTAAAATGGCCCCGAAACGCTCCG
CAGCAGCAGCAGCACCAGCAACAGCAGGCCCCGTCCCCGCGCCCTCACCA
CCCACCATGCCCTCCGCATCCTCCGCACCGGCAGCTTCCTCTCTCTCCTC
CGGCCCCAAAACCCTCACCCAGAACTCCTCCATCTACGACATCGCCCACA
CAGTCTGGCAGCAGTACCTGGCGACCACGCCGCAGCGCACAATGCTGCTA
GATGCGTTCATGGGATTCTTGGTGCTTGTCGGTGGTGTGCAGTTTGTTTA
TTGTGTCGTTGGGGGGAATTATGTGAGTATACTTTTCCCCATTGGATATG
GATGAGTTCGGGTACAGAGAAATTGGAGTTTCAGAGTTTGGCTAATATTG
GAATCTTTGTGACAGCCGTTCAATGCCTTCCTGAGTGGTTTCTGTGCTGC
CGTTGGTCAGTTTGTTCTTACGGCTAGTTTGAGGATGCAGACTAGTGGTG
GTTCGACTTCGGCGACTGGGGGTGTGAGTGGTGGGAAGGGGAAGGCGGGG
AAGAAGGGTGCTGCGGCTGGTGCTGGGGAGGAGGGGAGTGGTGTTTCGCC
TGAGAGGTTAGTTTATTTACTTTACTTGGGTGGTTTCTTTGGGGTGAGAC
TGGATTGCTAACTGTTTTGTGTAGGGCATTCGCGGATTATGTCTTTGGGA
GTCTGATTCTGCATTTCTTCTGTATTAACTTCATTAACTAGAGGTCGTCG
GGTCTGTGGGACATTGTGGATATGGATGAGATTTGGTAGAATGGATGGAA
AGGTGGATATAAAGTGACAGGAGAGGAGAGGATAGGATAGGGTTCAGGCT
GTTTCCCTGGTGGAGTAGCCTGGTCTGCTCTGTTTCTAATCTGAGTTGGG
TGAAGGTAAAACAAGTCGAGTATCTGTTATTGCGTTATGTTAGCTAGCTA
CTATTTATACCTGTGTATCAATGTATGGATCTACTGTTT
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Coding sequence (CDS) from alignment at ch8:920517..921555-

>KJC3_011537-T1 ID=KJC3_011537-T1|Name=KJC3_011537-T1|organism=Aspergillus niger KJC3|type=CDS|length=1647bp|location=Sequence derived from alignment at ch8:920517..921555- (Aspergillus niger KJC3)
GGCATTCGCGGATTATGTCTTTGGGAGTCTGATTCTGCATTTCTTCTGTA
TTAACTTCATTAACTAGCCGTTCAATGCCTTCCTGAGTGGTTTCTGTGCT
GCCGTTGGTCAGTTTGTTCTTACGGCTAGTTTGAGGATGCAGACTAGTGG
TGGTTCGACTTCGGCGACTGGGGGTGTGAGTGGTGGGAAGGGGAAGGCGG
GGAAGAAGGGTGCTGCGGCTGGTGCTGGGGAGGAGGGGAGTGGTGTTTCG
CCTGAGAGATGGCCCCGAAACGCTCCGCAGCAGCAGCAGCACCAGCAACA
GCAGGCCCCGTCCCCGCGCCCTCACCACCCACCATGCCCTCCGCATCCTC
CGCACCGGCAGCTTCCTCTCTCTCCTCCGGCCCCAAAACCCTCACCCAGA
ACTCCTCCATCTACGACATCGCCCACACAGTCTGGCAGCAGTACCTGGCG
ACCACGCCGCAGCGCACAATGCTGCTAGATGCGTTCATGGGATTCTTGGT
GCTTGTCGGTGGTGTGCAGTTTGTTTATTGTGTCGTTGGGGGGAATTATG
GCATTCGCGGATTATGTCTTTGGGAGTCTGATTCTGCATTTCTTCTGTAT
TAACTTCATTAACTAGCCGTTCAATGCCTTCCTGAGTGGTTTCTGTGCTG
CCGTTGGTCAGTTTGTTCTTACGGCTAGTTTGAGGATGCAGACTAGTGGT
GGTTCGACTTCGGCGACTGGGGGTGTGAGTGGTGGGAAGGGGAAGGCGGG
GAAGAAGGGTGCTGCGGCTGGTGCTGGGGAGGAGGGGAGTGGTGTTTCGC
CTGAGAGATGGCCCCGAAACGCTCCGCAGCAGCAGCAGCACCAGCAACAG
CAGGCCCCGTCCCCGCGCCCTCACCACCCACCATGCCCTCCGCATCCTCC
GCACCGGCAGCTTCCTCTCTCTCCTCCGGCCCCAAAACCCTCACCCAGAA
CTCCTCCATCTACGACATCGCCCACACAGTCTGGCAGCAGTACCTGGCGA
CCACGCCGCAGCGCACAATGCTGCTAGATGCGTTCATGGGATTCTTGGTG
CTTGTCGGTGGTGTGCAGTTTGTTTATTGTGTCGTTGGGGGGAATTATGG
CATTCGCGGATTATGTCTTTGGGAGTCTGATTCTGCATTTCTTCTGTATT
AACTTCATTAACTAGCCGTTCAATGCCTTCCTGAGTGGTTTCTGTGCTGC
CGTTGGTCAGTTTGTTCTTACGGCTAGTTTGAGGATGCAGACTAGTGGTG
GTTCGACTTCGGCGACTGGGGGTGTGAGTGGTGGGAAGGGGAAGGCGGGG
AAGAAGGGTGCTGCGGCTGGTGCTGGGGAGGAGGGGAGTGGTGTTTCGCC
TGAGAGATGGCCCCGAAACGCTCCGCAGCAGCAGCAGCACCAGCAACAGC
AGGCCCCGTCCCCGCGCCCTCACCACCCACCATGCCCTCCGCATCCTCCG
CACCGGCAGCTTCCTCTCTCTCCTCCGGCCCCAAAACCCTCACCCAGAAC
TCCTCCATCTACGACATCGCCCACACAGTCTGGCAGCAGTACCTGGCGAC
CACGCCGCAGCGCACAATGCTGCTAGATGCGTTCATGGGATTCTTGGTGC
TTGTCGGTGGTGTGCAGTTTGTTTATTGTGTCGTTGGGGGGAATTAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0008250oligosaccharyltransferase complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011537KJC3_011537Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011537-T1KJC3_011537-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011537-T1.cdsKJC3_011537-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011537-T1.utr3p1KJC3_011537-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011537-T1.exon3KJC3_011537-T1.exon3Aspergillus niger KJC3exon
KJC3_011537-T1.exon2KJC3_011537-T1.exon2Aspergillus niger KJC3exon
KJC3_011537-T1.exon1KJC3_011537-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011537-T1.utr5p1KJC3_011537-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265JA7
DBxrefInterPro:IPR003038
DBxrefPFAM:PF02109
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:920517..921555 -
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