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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:955628..957885+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011548-T1 ID=KJC3_011548-T1|Name=KJC3_011548-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2258bp|location=Sequence derived from alignment at ch8:955628..957885+ (Aspergillus niger KJC3)
AAGTATGGCACTGGACGAATCCCTCCAAAGGCAGAGTAGAAAGATTACTT
CAACCCGCTAACGCCTCCTGGGCCCTTGGCGCAGGTCATCCGGGCTCCAC
CGCCCAACCTCGGATTCCCCAGAGCTCCAGCTTGCCGTCCATTTCCTTCC
CGATATTATTGTCTTCTGCCTGACTGTTCTACCTGCCCGCCATCCTTCAA
TATACCATACCTTCACTCATAAGGCATTGCTACTATTCACACAATGCGCC
CCAAGTCTTCAAAACCCACCAGTGATGAGCTGCTCGCTCAATTTGACGAC
CTGGGGGTCGATTCTGCTCCCGAGCAGCAGCCCTCCAAGACGGCTCCCAA
ACCCACCACGGCACAGTCCGAGCAGGACATTCTCGCAGAACTGGACAGTC
TAGCCACCCAGCGCCCCAGCAGTGGCCCAGGAACCCCGCGCGTGTCTACA
AACGAACCCAGACCTACGATCAAGTCGCCCAAACCGGCTGCCACTACCAC
AACCCCCTCTACCGGCCGTTCTAGTGAAGAGAGACAGGCGCCCCGTAAGT
CGGAGGAGATCACCAGAGCTTCCGCTACGGAGAAAAAGGCTGCAGATGTG
CCGAAGCCGGAGCCTGAGAAGCCAGAGGCTCAGGAGAAACCTGCCTCGAG
CGGTGGTGGCGGTGGATGGTGGGGTGGTATCTTTGCAACCGCCAGCGCTG
CCATGAAGCAGGCTGAGGCGGCGGTCAAGGAGATTAAGCAGAATGAAGAG
GCTCAGAAGTGGGCTCAACAGATGAAGGGCAATGTAGGAGCTCTCAAAGA
CCTAGGTATGTATTCTTTGTATAACTTCATTTCGTTTTGAATGGTCGCTA
ACGACAAACCACCAGGTGGGGAGCTGCGCAACATGGCTATTCCTACGTTT
ACCACTTTAATCCATACACTCGCTCCTCCCATCTCGTCCCATGAACGCCT
TCAAATCCACGTAACACATGACTTGTCTGGCTATCCCAGCATCGACCCTC
TGGTGTACGCGGTCTTCTCGCGCGTGATGGCGCAGGTCGAAGGCGGGGAT
CTCCTTGTCATTCAGCGGGGCCAGGAGTCAGCTCCGAAGCGCGGACTGGA
TATTGGCGGCGCCCAGTTCTCTGGCCCAGGCTGGCATGATGGCCCATGGT
GGCGCACTGTGACGCCTGGCAGCCCTCGCACTCTGTCGGCCATCCGAGGC
ACAGTCGAGGCCACCAAGCTTGCGCGGGCCAGCGCCGAAGCCTACGCTAC
TGAGTATTTCTCGGCCAAGGGCGGCGTAGAAGCGGCTGCAAAACAAGCTA
CTCAAGATCTGAGCGAGACCAACCCGGTCCGCAGCAGCGATATCTTTCTC
GCGATCCAGGCCATCAGCCAGACCACCTCAACCGAACTCTTCCAGGCGGG
TCCTACAACCGACCAAGCCACCCCGGCGGGCGTTGTGGACGTGCCCGAAG
CCGCAGAGGAAGAAGTCGTCTTCGCGCTGTATCTCCACGACCCCATCCAC
GGCATCGCCTTCCACACGCTCTCTCAGGCCATTCCCCAAAAATGGATCGA
CTGGCTCGAGACCCCCGCTATCCCAGTGGAGGACCCCGAGGCCGAAGATG
CCAGCGTCCCTCGGACCACCATCCCCGACGACATCGCCGACATCATCGAG
AGCGGCGGCGTCGACCCCCGAGAATGGGCGGCCGAATGGATCGAGGAAAG
CCTGTCCCTGGCTGCGGGTTTGGTTGCACAACGCTACGTGGCGCGGAGAA
TGGGCGTCGGCGAGGGCGGACCGGCCAAGGGCAAGATGCGTGCTGAGCAG
GCATCCGTGGTGGACAGTGGCGCGGGCGAGGCCGCACGCGCGATTTAGAG
TTAGATTGATGTGGTGGATACGTCGATCAATCCTGTCCTCTTATCGCATT
TGCGTCTTACTTTTATCCTGTCTGCCTTTTTTTTGGGGCGCTTGTCAACC
CTTCACATGACCACATGATACGATACGACCCTTAACCCCCCCAATTCACA
CCTTTACCCCCACATATTCTTATCTTTGTTGTATTGAGCCATGACATGAC
AGCTTTTTTATATTCGCGCCATCTGCGGCGTTCTTAATACCATATACATA
CATACAGACAGTCTTACTTTGAGCTAACACCCGTATCCAATCAGTCCCAT
GTACATACAACAGACCCATGATAACAAACAAATACAATCAACGCAGTCTA
CGGCATCTAATTTACCACTGACATACTATACGTGCCCACATTAAAACTCT
AAAATGAC back to topCoding sequence (CDS) from alignment at ch8:955628..957885+ >KJC3_011548-T1 ID=KJC3_011548-T1|Name=KJC3_011548-T1|organism=Aspergillus niger KJC3|type=CDS|length=3090bp|location=Sequence derived from alignment at ch8:955628..957885+ (Aspergillus niger KJC3)
ATGCGCCCCAAGTCTTCAAAACCCACCAGTGATGAGCTGCTCGCTCAATT
TGACGACCTGGGGGTCGATTCTGCTCCCGAGCAGCAGCCCTCCAAGACGG
CTCCCAAACCCACCACGGCACAGTCCGAGCAGGACATTCTCGCAGAACTG
GACAGTCTAGCCACCCAGCGCCCCAGCAGTGGCCCAGGAACCCCGCGCGT
GTCTACAAACGAACCCAGACCTACGATCAAGTCGCCCAAACCGGCTGCCA
CTACCACAACCCCCTCTACCGGCCGTTCTAGTGAAGAGAGACAGGCGCCC
CGTAAGTCGGAGGAGATCACCAGAGCTTCCGCTACGGAGAAAAAGGCTGC
AGATGTGCCGAAGCCGGAGCCTGAGAAGCCAGAGGCTCAGGAGAAACCTG
CCTCGAGCGGTGGTGGCGGTGGATGGTGGGGTGGTATCTTTGCAACCGCC
AGCGCTGCCATGAAGCAGGCTGAGGCGGCGGTCAAGGAGATTAAGCAGAA
TGAAGAGGCTCAGAAGTGGGCTCAACAGATGAAGGGCAATGTAGGAGCTC
TCAAAGACCTAGGTGGGGAGCTGCGCAACATGGCTATTCCTACGTTTACC
ACTTTAATCCATACACTCGCTCCTCCCATCTCGTCCCATGAACGCCTTCA
AATCCACGTAACACATGACTTGTCTGGCTATCCCAGCATCGACCCTCTGG
TGTACGCGGTCTTCTCGCGCGTGATGGCGCAGGTCGAAGGCGGGGATCTC
CTTGTCATTCAGCGGGGCCAGGAGTCAGCTCCGAAGCGCGGACTGGATAT
TGGCGGCGCCCAGTTCTCTGGCCCAGGCTGGCATGATGGCCCATGGTGGC
GCACTGTGACGCCTGGCAGCCCTCGCACTCTGTCGGCCATCCGAGGCACA
GTCGAGGCCACCAAGCTTGCGCGGGCCAGCGCCGAAGCCTACGCTACTGA
GTATTTCTCGGCCAAGGGCGGCGTAGAAGCGGCTGCAAAACAAGCTACTC
AAGATCTGAGCGAGACCAACCCGGTCCGCAGCAGCGATATCTTTCTCGCG
ATCCAGGCCATCAGCCAGACCACCTCAACCGAACTCTTCCAGGCGGGTCC
TACAACCGACCAAGCCACCCCGGCGGGCGTTGTGGACGTGCCCGAAGCCG
CAGAGGAAGAAGTCGTCTTCGCGCTGTATCTCCACGACCCCATCCACGGC
ATCGCCTTCCACACGCTCTCTCAGGCCATTCCCCAAAAATGGATCGACTG
GCTCGAGACCCCCGCTATCCCAGTGGAGGACCCCGAGGCCGAAGATGCCA
GCGTCCCTCGGACCACCATCCCCGACGACATCGCCGACATCATCGAGAGC
GGCGGCGTCGACCCCCGAGAATGGGCGGCCGAATGGATCGAGGAAAGCCT
GTCCCTGGCTGCGGGTTTGGTTGCACAACGCTACGTGGCGCGGAGAATGG
GCGTCGGCGAGGGCGGACCGGCCAAGGGCAAGATGCGTGCTGAGCAGGCA
TCCGTGGTGGACAGTGGCGCGGGCGAGGCCGCACGCGCGATTTAGATGCG
CCCCAAGTCTTCAAAACCCACCAGTGATGAGCTGCTCGCTCAATTTGACG
ACCTGGGGGTCGATTCTGCTCCCGAGCAGCAGCCCTCCAAGACGGCTCCC
AAACCCACCACGGCACAGTCCGAGCAGGACATTCTCGCAGAACTGGACAG
TCTAGCCACCCAGCGCCCCAGCAGTGGCCCAGGAACCCCGCGCGTGTCTA
CAAACGAACCCAGACCTACGATCAAGTCGCCCAAACCGGCTGCCACTACC
ACAACCCCCTCTACCGGCCGTTCTAGTGAAGAGAGACAGGCGCCCCGTAA
GTCGGAGGAGATCACCAGAGCTTCCGCTACGGAGAAAAAGGCTGCAGATG
TGCCGAAGCCGGAGCCTGAGAAGCCAGAGGCTCAGGAGAAACCTGCCTCG
AGCGGTGGTGGCGGTGGATGGTGGGGTGGTATCTTTGCAACCGCCAGCGC
TGCCATGAAGCAGGCTGAGGCGGCGGTCAAGGAGATTAAGCAGAATGAAG
AGGCTCAGAAGTGGGCTCAACAGATGAAGGGCAATGTAGGAGCTCTCAAA
GACCTAGGTGGGGAGCTGCGCAACATGGCTATTCCTACGTTTACCACTTT
AATCCATACACTCGCTCCTCCCATCTCGTCCCATGAACGCCTTCAAATCC
ACGTAACACATGACTTGTCTGGCTATCCCAGCATCGACCCTCTGGTGTAC
GCGGTCTTCTCGCGCGTGATGGCGCAGGTCGAAGGCGGGGATCTCCTTGT
CATTCAGCGGGGCCAGGAGTCAGCTCCGAAGCGCGGACTGGATATTGGCG
GCGCCCAGTTCTCTGGCCCAGGCTGGCATGATGGCCCATGGTGGCGCACT
GTGACGCCTGGCAGCCCTCGCACTCTGTCGGCCATCCGAGGCACAGTCGA
GGCCACCAAGCTTGCGCGGGCCAGCGCCGAAGCCTACGCTACTGAGTATT
TCTCGGCCAAGGGCGGCGTAGAAGCGGCTGCAAAACAAGCTACTCAAGAT
CTGAGCGAGACCAACCCGGTCCGCAGCAGCGATATCTTTCTCGCGATCCA
GGCCATCAGCCAGACCACCTCAACCGAACTCTTCCAGGCGGGTCCTACAA
CCGACCAAGCCACCCCGGCGGGCGTTGTGGACGTGCCCGAAGCCGCAGAG
GAAGAAGTCGTCTTCGCGCTGTATCTCCACGACCCCATCCACGGCATCGC
CTTCCACACGCTCTCTCAGGCCATTCCCCAAAAATGGATCGACTGGCTCG
AGACCCCCGCTATCCCAGTGGAGGACCCCGAGGCCGAAGATGCCAGCGTC
CCTCGGACCACCATCCCCGACGACATCGCCGACATCATCGAGAGCGGCGG
CGTCGACCCCCGAGAATGGGCGGCCGAATGGATCGAGGAAAGCCTGTCCC
TGGCTGCGGGTTTGGTTGCACAACGCTACGTGGCGCGGAGAATGGGCGTC
GGCGAGGGCGGACCGGCCAAGGGCAAGATGCGTGCTGAGCAGGCATCCGT
GGTGGACAGTGGCGCGGGCGAGGCCGCACGCGCGATTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011548-T1.utr5p1 | KJC3_011548-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011548-T1.utr3p1 | KJC3_011548-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264NDD |
| DBxref | InterPro:IPR018814 |
| DBxref | PFAM:PF10310 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:955628..957885 + |
|
