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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1040853..1043329- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011579-T2 ID=KJC3_011579-T2|Name=KJC3_011579-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2477bp|location=Sequence derived from alignment at ch8:1040853..1043329- (Aspergillus niger KJC3)
GCTTCGGCATCGCCGCTCGTCTCTTGCACCCTTCCAACGGTCGGGAATTT
ATGTTTCACTCGCCCCCGCTCTCTGTCTTGAGCTGCTATTTATCGGGGAT
TTTCTTTCTCCTTGGACCGACTCCTGGTGGATGCGCTCTTGTATTGCCCA
TCTTCCTCCCTGGCGGACTGCCTCTCCGCCGCCACTCGATCTACACCCAT
TTCTTTCACTCAGATCATGCCCCCCGTCAACTCGCCATCTGTAAGTTTTC
ACTACTTGCTTTGGCCCTCCGTGCATGGTGATTGTTCCTGCGTATCCCAT
ACCTCGGGACGGTCGCCACTTTGACTTTGCGCACGACCGTGGGATTGAAG
TACCAAGCCGATGTTGTGACGTTGCCTTGCCTTCTCAGTTGATGCTATCG
ACAGATGAGCTTCCACTCTAACTTTCTCTCCTTCATCACAGGATCCCCCC
GCTCTGTCGTCTTCCGCTTCTTCTTTTCGGCCTTTGACCGCGCTCTCCTT
GCCTGTTCCTTCGCTCCCCGCAGCCGTGTCCGATGACGCTCATGATGATA
ACGTGAGCTTTCTCCGATCTCGTGTGCGCTCCCCACCAGACTCGACCTCT
TCACTCAGTCGCCAGCGCCGACGTCGACAACAGACCGCGTCCGACCTTGA
TCTAGAGCCTATGGAGCTGGACGACCCGTCTCACTTGCGCATCGAAATCA
ACCGCCGCATCCCTATCGTGCGCCGTCAACGCGACACTTCCGGCAACCCC
AACCCGACTAATCTCCCCAACTACGAAGGTCAGATGTCGAATTCACGCTC
GGTGTACGGCTGGGCTCCGGCCTCTGATGATGACGACGATGATGTAGGCT
ACGAGCCGCTTCACGAAAGTAACACGATCTCATGGTTCGGCCGATTCTCC
GATCGCTACGCAGCTGCTCGTCGCCACGCGCGCCGGGATGCCGCTGGTCG
AAGTCCTCCAGCTTTGCCAGACGAACCTTCCGATAGCAGTCTCAATCGCC
AAAGCGATCCAGCCCTTTCGACAACAGAGGCTTTCCTACAGTCAGTGCGA
CGCCAACAGCGGGGTTCGCGGACGCGCGCGCGGGCGCTTCACGAATATTT
GTTAGAGCGGGAACGAGCTTCCCAGGATTCAGATGAAAGTCGAGAGCGAC
CAGGTCCTCCATCAGCCTCACGAGCATATCGCTTCCTTCCCAGTGCCCGG
GGCGAGTCGCAACGATTTCTGACTCACAATGACCTACGCGCTCGGATAAG
CGCTCATCGACAGTTACACATGGACAACCCTCCAAACCCACGGCTGAAGG
AGACCATCCTATATCTGGATCGCCTGCGGTACTCTACCTCGTTTGAGGAA
AGCCTCACCTCAGCGGCGGCAGGGGGTTTTGTTCATACTGATTTCCTTAA
CGGGAACGAGGATGACTTTATCCTCGACATCAGTTCGATAGCGCCGCCGC
CAGACAGTTCATGGCTTCGTCCCGGTATGGTTTTCTCGGGGTCGCAGCGG
GCTGCCAGCAGTGCGAGCTCGCTTTTTGCACAACGAGGGCTCAGCCCGTC
CGCATCCCAGGACCCGATGATTGTCAATGGGAGTGACAACAGTCGCATCA
GTGTATATACCACAACAGGACGACGGTACCTGGCTAATAATATATACCAC
CTCGGAGGCGGTAAGGACGAGAACTGGCCGGTAAAGGTCACCATACATAG
TATCAACCCGGACGATATGACGCTGTCGGGTACCATGGAAGCATACAACA
TACCGGACAAAACGACCCCGGCGCATGATGCACATATCGTCACATATCTA
GAGGGGGAAATTATTGATTTTAACAAACACACGCTCGAAACGAAGAACTT
CAAGGCAGATGCGGAGATTGACAGTACATATTGGCGGGAGCTGCAGCCAT
TCAAGAACTTGAGCGATGAGGAAATGACGCGGAAACTCGTTAGTCGGAAG
TGGGTAACGGAGCAGTTATCCAAGCAGTGGATACTGATGAGATGGAAGGG
TGAGTTTCGATTAAGAGAGAGTCTTCAAAATAAAACTAATATAAGAGCCT
TAGAACGCTGTTTCATCACACCCACCGACTCCCGACAAGGACTGACAATT
TCGGGATTCTACTATATCTCACTGAACCGGCAAAGTGGCAATATTGAAGG
GTTATATTACGATCCGGGCAGCTCGCCATACCAGCAGCTGTCATTGAAGC
CAGAGTCGAAGAAAATGGTGCGTCCCTCATACGGGTTCCGCTAACCTTCG
AAAAACAGCCTACGGCACAGCTGTCTGTTATATTCGTGTCATATGTAAAC
TGCTAATCTTGGGCTTTGCTTTATCATGGCGTTGGATGGGACAATGTTTG
CATAGCCGGGTGTTCTTATACCAGTATCAGCATTCATTGTCAAATTGTGC
AAATATTACCCAATTACATTACATCAGTCTACACATTGTGGATCTACGCG
CTCCTACCACCAACCCCCTAAGGGAAA back to topCoding sequence (CDS) from alignment at ch8:1040853..1043329- >KJC3_011579-T2 ID=KJC3_011579-T2|Name=KJC3_011579-T2|organism=Aspergillus niger KJC3|type=CDS|length=4383bp|location=Sequence derived from alignment at ch8:1040853..1043329- (Aspergillus niger KJC3)
AACGCTGTTTCATCACACCCACCGACTCCCGACAAGGACTGACAATTTCG
GGATTCTACTATATCTCACTGAACCGGCAAAGTGGCAATATTGAAGGGTT
ATATTACGATCCGGGCAGCTCGCCATACCAGCAGCTGTCATTGAAGCCAG
AGTCGAAGAAAATGGTGCGTCCCTCATACGGGTTCCGCTAAGCTACGAGC
CGCTTCACGAAAGTAACACGATCTCATGGTTCGGCCGATTCTCCGATCGC
TACGCAGCTGCTCGTCGCCACGCGCGCCGGGATGCCGCTGGTCGAAGTCC
TCCAGCTTTGCCAGACGAACCTTCCGATAGCAGTCTCAATCGCCAAAGCG
ATCCAGCCCTTTCGACAACAGAGGCTTTCCTACAGTCAGTGCGACGCCAA
CAGCGGGGTTCGCGGACGCGCGCGCGGGCGCTTCACGAATATTTGTTAGA
GCGGGAACGAGCTTCCCAGGATTCAGATGAAAGTCGAGAGCGACCAGGTC
CTCCATCAGCCTCACGAGCATATCGCTTCCTTCCCAGTGCCCGGGGCGAG
TCGCAACGATTTCTGACTCACAATGACCTACGCGCTCGGATAAGCGCTCA
TCGACAGTTACACATGGACAACCCTCCAAACCCACGGCTGAAGGAGACCA
TCCTATATCTGGATCGCCTGCGGTACTCTACCTCGTTTGAGGAAAGCCTC
ACCTCAGCGGCGGCAGGGGGTTTTGTTCATACTGATTTCCTTAACGGGAA
CGAGGATGACTTTATCCTCGACATCAGTTCGATAGCGCCGCCGCCAGACA
GTTCATGGCTTCGTCCCGGTATGGTTTTCTCGGGGTCGCAGCGGGCTGCC
AGCAGTGCGAGCTCGCTTTTTGCACAACGAGGGCTCAGCCCGTCCGCATC
CCAGGACCCGATGATTGTCAATGGGAGTGACAACAGTCGCATCAGTGTAT
ATACCACAACAGGACGACGGTACCTGGCTAATAATATATACCACCTCGGA
GGCGGTAAGGACGAGAACTGGCCGGTAAAGGTCACCATACATAGTATCAA
CCCGGACGATATGACGCTGTCGGGTACCATGGAAGCATACAACATACCGG
ACAAAACGACCCCGGCGCATGATGCACATATCGTCACATATCTAGAGGGG
GAAATTATTGATTTTAACAAACACACGCTCGAAACGAAGAACTTCAAGGC
AGATGCGGAGATTGACAGTACATATTGGCGGGAGCTGCAGCCATTCAAGA
ACTTGAGCGATGAGGAAATGACGCGGAAACTCGTTAGTCGGAAGTGGGTA
ACGGAGCAGTTATCCAAGCAGTGGATACTGATGAGATGGAAGGATGGAGC
TGGACGACCCGTCTCACTTGCGCATCGAAATCAACCGCCGCATCCCTATC
GTGCGCCGTCAACGCGACACTTCCGGCAACCCCAACCCGACTAATCTCCC
CAACTACGAAGAACGCTGTTTCATCACACCCACCGACTCCCGACAAGGAC
TGACAATTTCGGGATTCTACTATATCTCACTGAACCGGCAAAGTGGCAAT
ATTGAAGGGTTATATTACGATCCGGGCAGCTCGCCATACCAGCAGCTGTC
ATTGAAGCCAGAGTCGAAGAAAATGGTGCGTCCCTCATACGGGTTCCGCT
AAGCTACGAGCCGCTTCACGAAAGTAACACGATCTCATGGTTCGGCCGAT
TCTCCGATCGCTACGCAGCTGCTCGTCGCCACGCGCGCCGGGATGCCGCT
GGTCGAAGTCCTCCAGCTTTGCCAGACGAACCTTCCGATAGCAGTCTCAA
TCGCCAAAGCGATCCAGCCCTTTCGACAACAGAGGCTTTCCTACAGTCAG
TGCGACGCCAACAGCGGGGTTCGCGGACGCGCGCGCGGGCGCTTCACGAA
TATTTGTTAGAGCGGGAACGAGCTTCCCAGGATTCAGATGAAAGTCGAGA
GCGACCAGGTCCTCCATCAGCCTCACGAGCATATCGCTTCCTTCCCAGTG
CCCGGGGCGAGTCGCAACGATTTCTGACTCACAATGACCTACGCGCTCGG
ATAAGCGCTCATCGACAGTTACACATGGACAACCCTCCAAACCCACGGCT
GAAGGAGACCATCCTATATCTGGATCGCCTGCGGTACTCTACCTCGTTTG
AGGAAAGCCTCACCTCAGCGGCGGCAGGGGGTTTTGTTCATACTGATTTC
CTTAACGGGAACGAGGATGACTTTATCCTCGACATCAGTTCGATAGCGCC
GCCGCCAGACAGTTCATGGCTTCGTCCCGGTATGGTTTTCTCGGGGTCGC
AGCGGGCTGCCAGCAGTGCGAGCTCGCTTTTTGCACAACGAGGGCTCAGC
CCGTCCGCATCCCAGGACCCGATGATTGTCAATGGGAGTGACAACAGTCG
CATCAGTGTATATACCACAACAGGACGACGGTACCTGGCTAATAATATAT
ACCACCTCGGAGGCGGTAAGGACGAGAACTGGCCGGTAAAGGTCACCATA
CATAGTATCAACCCGGACGATATGACGCTGTCGGGTACCATGGAAGCATA
CAACATACCGGACAAAACGACCCCGGCGCATGATGCACATATCGTCACAT
ATCTAGAGGGGGAAATTATTGATTTTAACAAACACACGCTCGAAACGAAG
AACTTCAAGGCAGATGCGGAGATTGACAGTACATATTGGCGGGAGCTGCA
GCCATTCAAGAACTTGAGCGATGAGGAAATGACGCGGAAACTCGTTAGTC
GGAAGTGGGTAACGGAGCAGTTATCCAAGCAGTGGATACTGATGAGATGG
AAGGATGGAGCTGGACGACCCGTCTCACTTGCGCATCGAAATCAACCGCC
GCATCCCTATCGTGCGCCGTCAACGCGACACTTCCGGCAACCCCAACCCG
ACTAATCTCCCCAACTACGAAGAACGCTGTTTCATCACACCCACCGACTC
CCGACAAGGACTGACAATTTCGGGATTCTACTATATCTCACTGAACCGGC
AAAGTGGCAATATTGAAGGGTTATATTACGATCCGGGCAGCTCGCCATAC
CAGCAGCTGTCATTGAAGCCAGAGTCGAAGAAAATGGTGCGTCCCTCATA
CGGGTTCCGCTAAGCTACGAGCCGCTTCACGAAAGTAACACGATCTCATG
GTTCGGCCGATTCTCCGATCGCTACGCAGCTGCTCGTCGCCACGCGCGCC
GGGATGCCGCTGGTCGAAGTCCTCCAGCTTTGCCAGACGAACCTTCCGAT
AGCAGTCTCAATCGCCAAAGCGATCCAGCCCTTTCGACAACAGAGGCTTT
CCTACAGTCAGTGCGACGCCAACAGCGGGGTTCGCGGACGCGCGCGCGGG
CGCTTCACGAATATTTGTTAGAGCGGGAACGAGCTTCCCAGGATTCAGAT
GAAAGTCGAGAGCGACCAGGTCCTCCATCAGCCTCACGAGCATATCGCTT
CCTTCCCAGTGCCCGGGGCGAGTCGCAACGATTTCTGACTCACAATGACC
TACGCGCTCGGATAAGCGCTCATCGACAGTTACACATGGACAACCCTCCA
AACCCACGGCTGAAGGAGACCATCCTATATCTGGATCGCCTGCGGTACTC
TACCTCGTTTGAGGAAAGCCTCACCTCAGCGGCGGCAGGGGGTTTTGTTC
ATACTGATTTCCTTAACGGGAACGAGGATGACTTTATCCTCGACATCAGT
TCGATAGCGCCGCCGCCAGACAGTTCATGGCTTCGTCCCGGTATGGTTTT
CTCGGGGTCGCAGCGGGCTGCCAGCAGTGCGAGCTCGCTTTTTGCACAAC
GAGGGCTCAGCCCGTCCGCATCCCAGGACCCGATGATTGTCAATGGGAGT
GACAACAGTCGCATCAGTGTATATACCACAACAGGACGACGGTACCTGGC
TAATAATATATACCACCTCGGAGGCGGTAAGGACGAGAACTGGCCGGTAA
AGGTCACCATACATAGTATCAACCCGGACGATATGACGCTGTCGGGTACC
ATGGAAGCATACAACATACCGGACAAAACGACCCCGGCGCATGATGCACA
TATCGTCACATATCTAGAGGGGGAAATTATTGATTTTAACAAACACACGC
TCGAAACGAAGAACTTCAAGGCAGATGCGGAGATTGACAGTACATATTGG
CGGGAGCTGCAGCCATTCAAGAACTTGAGCGATGAGGAAATGACGCGGAA
ACTCGTTAGTCGGAAGTGGGTAACGGAGCAGTTATCCAAGCAGTGGATAC
TGATGAGATGGAAGGATGGAGCTGGACGACCCGTCTCACTTGCGCATCGA
AATCAACCGCCGCATCCCTATCGTGCGCCGTCAACGCGACACTTCCGGCA
ACCCCAACCCGACTAATCTCCCCAACTACGAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011579-T2.utr3p1 | KJC3_011579-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011579-T2.utr5p1 | KJC3_011579-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018618 |
| DBxref | PFAM:PF09783 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1040853..1043329 - |
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