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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1074148..1076502- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011588-T1 ID=KJC3_011588-T1|Name=KJC3_011588-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2355bp|location=Sequence derived from alignment at ch8:1074148..1076502- (Aspergillus niger KJC3)
CAGAGGGACCGACCGATAAAGTTTCCCGCTGGTTGATACCGTCATCGTTC
TTCGTCCATCAAGCAGATCAATGGAATGCTAGTAATGCTTGTGGAACATT
CTCGGCATTGACCATTGTTCTTTATTGCAGAGTTTTCTTCAGAGATTTAG
TGGCTTTGGCCCCACGCTGGAAATAGAGGATTGAAGCATCTTTGAGGCTC
CGATAAGACTACATATCGTTGCCTCTGCTTAGTTCCCGCTTTGTTTACAA
ACAACAGCCTCCGTCTCTCTGCATGGCGTAGACTCGCCCTGGTGGCAGGA
TGCGAACCCAACGATTTGTGGTCTGGCTAGGCACCTTTGCCCTCATCTCA
TTATGTCTCATTCTTTTCAGAAGTTCCAGTCCTTCACCCTCACCTATTGT
GGACTTTTATCCTTCACCCAATTCTCGGCCTCCAACTACTTTGCAGAGGC
CCCCAGTACCGTCCAATGCCCAGCTTATTGAACAGACTGGCTACCGAAAG
GTTGCTCAGCCAGACAGTCTTCATCCGGTTGCATCGCTTGTCAAGAATGC
TGAGCAGCAATTTGATCGGTTACTGTCACGTCAATCGAAGACCTTGGCTC
AGGCTGTCGACGAATATCGAGAGCGCTACAACATGCACCCGCCCCCGCAT
TTTGACAAGTGGTTCCAATTTGCCAAGGATAGAGGGGTTCAGCTGATTGA
TGAATACGATACAATATATCATGCTCTGTTGCCATTTTGGGCGCTCGAAC
CGAAGACTATTCGCGACCGGGCTCGGGAGACGCTGGGCTTCGACAATTCT
ATGATCGGGGTACTGATCCGAAATGGGTCTGTGTCACTGGTGGAAGGTGG
AGCATTCGAGCAGGGCTGGCAGCGTAGTGCCACCGCTAAGATGATCAACA
GTTTTGTCGAGTATCTGCCTGATATGGATCTCGTGTTTAATGCCCTCGAT
GAGCCTCGAGTTGTCGTACCCAGCGAGGATCTTCAGAGGCTGGTTGCAAT
TGCCAGAGATCAAGTCTCTCAGAATACTGTTGTGAATACCATGCCCATAA
ATGCATGGTCAGATAGACCCAGCGACTTGAATAAAGGGGACCGCATTGAT
GAAGTGCGTACTACCCGTTTCAACCGATTCACCCGTCAGTCCACATGGAG
TTATTCTCGGTCTTCCTGTCCAGTCGATAGTCCGGTCCGCTCTCTCGATG
AGCAGGCTGCGGATAACATAAACTCCTATGCTCAAGGCGAGTTAGGATTC
ATATACAACACCAGCGCCTTTTCCGACATTTGCAACTCACCTTCCCTCCG
CTACAAGTACGGGTTCTTTGACCGGCCGAACAGGTTTGAAGCTGTACATG
ACTTGTTCCCAGTCTTCTCGCAGAGCAAGATCTCGAGCTACCAGGACATC
CTGTACCCTAGCCCTTGGTACTGGTCAGACCAGGTACCTTATGAAGAAGA
CAAGGATATGGAGTGGGATGAAAAGGACAGCCGAATGTTCTGGAGAGGCT
CAACAACAGGGGGATACTCCAGAGCTGGGGGCTGGCGGCGACAGCACCGA
CAGTTGTTCGTCGGCAAAGTTAATGCCCTCAACACAGCCAAGATACTGTC
CAAGACCGAAAGTAGCCAATGGAAAACCAGGGGTGTTGGTCGAAACTCCT
TTACCGACCTCTTCGACGTTCGGTTCACGTACATTGGCCAATGTGATGAT
AAGGACTGTGCCGCCCAGGAAGAATATTTTGACTTGGCGGAGCCGGTTGA
TCAGCAAGACGCTTGGGCGTACAAACATCTGTTGGACATGGATGGGAATG
CCTTCAGTGGTCGGTTCTATGCGTTCTTGCGCAGCAGGAGTCTCGTTCAT
AAGGTCTCAATCTTCCGTGAATGGCATGATGAGTGGCTCAAACCTTGGAA
ACATTACGTACCCTTGAGCCTGACCGGAGATGATTATCTGGAGGCCATAC
GATACTTTGAATCCGAAGAAGAGGGCAGAGTGATCGCACCAAGGCTGGCC
CAGCAAGGCCGGGAATGGGCGCAGAAAGCTCTTCGGAGTGAAGACATGGA
GGTCTGGTTCTTCCGACTTTTACTAGAGTAAGTGCACTTTTTTTTATTCC
CTTCTTTACCCCGTGATTTCTAATACTAAAACACCCATCAGGTACGGGCG
CCTAGTTGACGACAATCGACATAATTTGGGGTTTTCGGTCTAGCTTTGTA
TAATGGCTGCCAGTTTTTGCTATTTTGTTTTCTGTCATATTCCCCAACTT
TTAACGAACGTATGACATATATGGCGTTTGGGAGCCTTTGCTATGATGAG
ACGAAAAATTGGGATTTCCGATTGATGTGTATATATGATAAATGAGAAAG
CGATA back to topCoding sequence (CDS) from alignment at ch8:1074148..1076502- >KJC3_011588-T1 ID=KJC3_011588-T1|Name=KJC3_011588-T1|organism=Aspergillus niger KJC3|type=CDS|length=3660bp|location=Sequence derived from alignment at ch8:1074148..1076502- (Aspergillus niger KJC3)
GTACGGGCGCCTAGTTGACGACAATCGACATAATTTGGGGTTTTCGGTCT
AGATGCGAACCCAACGATTTGTGGTCTGGCTAGGCACCTTTGCCCTCATC
TCATTATGTCTCATTCTTTTCAGAAGTTCCAGTCCTTCACCCTCACCTAT
TGTGGACTTTTATCCTTCACCCAATTCTCGGCCTCCAACTACTTTGCAGA
GGCCCCCAGTACCGTCCAATGCCCAGCTTATTGAACAGACTGGCTACCGA
AAGGTTGCTCAGCCAGACAGTCTTCATCCGGTTGCATCGCTTGTCAAGAA
TGCTGAGCAGCAATTTGATCGGTTACTGTCACGTCAATCGAAGACCTTGG
CTCAGGCTGTCGACGAATATCGAGAGCGCTACAACATGCACCCGCCCCCG
CATTTTGACAAGTGGTTCCAATTTGCCAAGGATAGAGGGGTTCAGCTGAT
TGATGAATACGATACAATATATCATGCTCTGTTGCCATTTTGGGCGCTCG
AACCGAAGACTATTCGCGACCGGGCTCGGGAGACGCTGGGCTTCGACAAT
TCTATGATCGGGGTACTGATCCGAAATGGGTCTGTGTCACTGGTGGAAGG
TGGAGCATTCGAGCAGGGCTGGCAGCGTAGTGCCACCGCTAAGATGATCA
ACAGTTTTGTCGAGTATCTGCCTGATATGGATCTCGTGTTTAATGCCCTC
GATGAGCCTCGAGTTGTCGTACCCAGCGAGGATCTTCAGAGGCTGGTTGC
AATTGCCAGAGATCAAGTCTCTCAGAATACTGTTGTGAATACCATGCCCA
TAAATGCATGGTCAGATAGACCCAGCGACTTGAATAAAGGGGACCGCATT
GATGAAGTGCGTACTACCCGTTTCAACCGATTCACCCGTCAGTCCACATG
GAGTTATTCTCGGTCTTCCTGTCCAGTCGATAGTCCGGTCCGCTCTCTCG
ATGAGCAGGCTGCGGATAACATAAACTCCTATGCTCAAGGCGAGTTAGGA
TTCATATACAACACCAGCGCCTTTTCCGACATTTGCAACTCACCTTCCCT
CCGCTACAAGTACGGGTTCTTTGACCGGCCGAACAGGTTTGAAGCTGTAC
ATGACTTGTTCCCAGTCTTCTCGCAGAGCAAGATCTCGAGCTACCAGGAC
ATCCTGTACCCTAGCCCTTGGTACTGGTCAGACCAGGTACCTTATGAAGA
AGACAAGGATATGGAGTGGGATGAAAAGGACAGCCGAATGTTCTGGAGAG
GCTCAACAACAGGGGGATACTCCAGAGCTGGGGGCTGGCGGCGACAGCAC
CGACAGTTGTTCGTCGGCAAAGTTAATGCCCTCAACACAGCCAAGATACT
GTCCAAGACCGAAAGTAGCCAATGGAAAACCAGGGGTGTTGGTCGAAACT
CCTTTACCGACCTCTTCGACGTTCGGTTCACGTACATTGGCCAATGTGAT
GATAAGGACTGTGCCGCCCAGGAAGAATATTTTGACTTGGCGGAGCCGGT
TGATCAGCAAGACGCTTGGGCGTACAAACATCTGTTGGACATGGATGGGA
ATGCCTTCAGTGGTCGGTTCTATGCGTTCTTGCGCAGCAGGAGTCTCGTT
CATAAGGTCTCAATCTTCCGTGAATGGCATGATGAGTGGCTCAAACCTTG
GAAACATTACGTACCCTTGAGCCTGACCGGAGATGATTATCTGGAGGCCA
TACGATACTTTGAATCCGAAGAAGAGGGCAGAGTGATCGCACCAAGGCTG
GCCCAGCAAGGCCGGGAATGGGCGCAGAAAGCTCTTCGGAGTGAAGACAT
GGAGGTCTGGTTCTTCCGACTTTTACTAGAGTACGGGCGCCTAGTTGACG
ACAATCGACATAATTTGGGGTTTTCGGTCTAGATGCGAACCCAACGATTT
GTGGTCTGGCTAGGCACCTTTGCCCTCATCTCATTATGTCTCATTCTTTT
CAGAAGTTCCAGTCCTTCACCCTCACCTATTGTGGACTTTTATCCTTCAC
CCAATTCTCGGCCTCCAACTACTTTGCAGAGGCCCCCAGTACCGTCCAAT
GCCCAGCTTATTGAACAGACTGGCTACCGAAAGGTTGCTCAGCCAGACAG
TCTTCATCCGGTTGCATCGCTTGTCAAGAATGCTGAGCAGCAATTTGATC
GGTTACTGTCACGTCAATCGAAGACCTTGGCTCAGGCTGTCGACGAATAT
CGAGAGCGCTACAACATGCACCCGCCCCCGCATTTTGACAAGTGGTTCCA
ATTTGCCAAGGATAGAGGGGTTCAGCTGATTGATGAATACGATACAATAT
ATCATGCTCTGTTGCCATTTTGGGCGCTCGAACCGAAGACTATTCGCGAC
CGGGCTCGGGAGACGCTGGGCTTCGACAATTCTATGATCGGGGTACTGAT
CCGAAATGGGTCTGTGTCACTGGTGGAAGGTGGAGCATTCGAGCAGGGCT
GGCAGCGTAGTGCCACCGCTAAGATGATCAACAGTTTTGTCGAGTATCTG
CCTGATATGGATCTCGTGTTTAATGCCCTCGATGAGCCTCGAGTTGTCGT
ACCCAGCGAGGATCTTCAGAGGCTGGTTGCAATTGCCAGAGATCAAGTCT
CTCAGAATACTGTTGTGAATACCATGCCCATAAATGCATGGTCAGATAGA
CCCAGCGACTTGAATAAAGGGGACCGCATTGATGAAGTGCGTACTACCCG
TTTCAACCGATTCACCCGTCAGTCCACATGGAGTTATTCTCGGTCTTCCT
GTCCAGTCGATAGTCCGGTCCGCTCTCTCGATGAGCAGGCTGCGGATAAC
ATAAACTCCTATGCTCAAGGCGAGTTAGGATTCATATACAACACCAGCGC
CTTTTCCGACATTTGCAACTCACCTTCCCTCCGCTACAAGTACGGGTTCT
TTGACCGGCCGAACAGGTTTGAAGCTGTACATGACTTGTTCCCAGTCTTC
TCGCAGAGCAAGATCTCGAGCTACCAGGACATCCTGTACCCTAGCCCTTG
GTACTGGTCAGACCAGGTACCTTATGAAGAAGACAAGGATATGGAGTGGG
ATGAAAAGGACAGCCGAATGTTCTGGAGAGGCTCAACAACAGGGGGATAC
TCCAGAGCTGGGGGCTGGCGGCGACAGCACCGACAGTTGTTCGTCGGCAA
AGTTAATGCCCTCAACACAGCCAAGATACTGTCCAAGACCGAAAGTAGCC
AATGGAAAACCAGGGGTGTTGGTCGAAACTCCTTTACCGACCTCTTCGAC
GTTCGGTTCACGTACATTGGCCAATGTGATGATAAGGACTGTGCCGCCCA
GGAAGAATATTTTGACTTGGCGGAGCCGGTTGATCAGCAAGACGCTTGGG
CGTACAAACATCTGTTGGACATGGATGGGAATGCCTTCAGTGGTCGGTTC
TATGCGTTCTTGCGCAGCAGGAGTCTCGTTCATAAGGTCTCAATCTTCCG
TGAATGGCATGATGAGTGGCTCAAACCTTGGAAACATTACGTACCCTTGA
GCCTGACCGGAGATGATTATCTGGAGGCCATACGATACTTTGAATCCGAA
GAAGAGGGCAGAGTGATCGCACCAAGGCTGGCCCAGCAAGGCCGGGAATG
GGCGCAGAAAGCTCTTCGGAGTGAAGACATGGAGGTCTGGTTCTTCCGAC
TTTTACTAGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011588-T1.utr3p1 | KJC3_011588-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011588-T1.utr5p1 | KJC3_011588-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-28) |
| DBxref | InterPro:IPR006598 |
| DBxref | PFAM:PF05686 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1074148..1076502 - |
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