You are here

Home

KJC3_011600-T1, KJC3_011600-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011600-T1
Unique NameKJC3_011600-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1101328..1102557-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011600-T1 ID=KJC3_011600-T1|Name=KJC3_011600-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1230bp|location=Sequence derived from alignment at ch8:1101328..1102557- (Aspergillus niger KJC3)
ATTTCCCCAATTTCAACCTCAACAACACCACATACTACTTCTAACTCTCT
TTGCAGTTCCTCCCACTGACACATACTCACCATGGCCTGACGCCAGCCAC
TCGTTACACCAGCCCTCCACCTCCCCCCCACAAATACCACACAACAACAA
CCACAACCACCACCGCACCACCCAACCCAACCCATCTCATCTCATCTCCG
CACACCTGCATCCTCACTACCAAACCACCAACTAAACACACACCCTCATC
ACCACCACATCACATACCCACAAAAAGAACACAGAGAAAGCAAGCAAAGA
ATGCCCCGCCTCCACCCAACAACCATCCTCCTATTCCCCCTCCGCGTCCT
GACCATCCCATTCACAACCCTCATCGCGCGCATTCCCATCCTCCGCTCTC
GACACCGCCGCACCCGCACCCTAACCATGCTCCTCCCTCTACTCGTCTTA
CTCCTCATCCTCCTAACCCTCCTACCTCTATACATAATCTACCGGCCACC
GCACGCCCTAATCCGCTCCCTGGCGAACAAATACCCAGATACATTGTGGG
AGATACCACTCCCCACCACCAAGGACACAGAAGGGAAAGGAACGGAAAAA
GTAATCGCCCTAACCATCGACGACGCCCCCAGCACGTACACGCTCGACAT
CCTACACCTTCTCCAACAACATGACGCGCGGGCGACATTCTTCCTCATCG
GTTCGCAGATCCCCGGCCGGGAGGGGATTCTACATACGCTCGTGAAGAGC
GGGATGGAGCTGGGTAATCATGCGATGCACGATGAGCCGTCTGTTTCGAT
TGGGGAGGAGGTGCTGGAGAGGGAGATGTTGGAGGTGGATGGGGTGATTG
ACAGGGTTTATGAGGAATCTGGGGTGAAGCGGCCACGGTATGAGGACGGG
GCTGTGAAGAAGTGGTTCCGGCCTGGATCGGGGTTCTTTAATGGGTGGAT
GAGGGGGCTTGTGCAGAGACTCGGGTATAAGATTGTGTTGGGGAGTGTGT
ATCCGCATGATGCGCAGATCGGGTGGGCGGGGGTGAATGCGTGGCATGTG
AGGAGTATGGTTAGGGAGGGGAGTATTGTTGTGATGCATGATCGGAGGAG
TTGGACGGTGGAGGGGTTGAGAAGGGTGTTGCCGGTGTTGAAAGAGCGGG
GGTATAGGGTTGTTAGTTTGGGGGAGGCGATGGAAATTGCTAATGCTGCA
TCTACTGACGGAGGAAAGGAGATTGATTGA
back to top

Coding sequence (CDS) from alignment at ch8:1101328..1102557-

>KJC3_011600-T1 ID=KJC3_011600-T1|Name=KJC3_011600-T1|organism=Aspergillus niger KJC3|type=CDS|length=930bp|location=Sequence derived from alignment at ch8:1101328..1102557- (Aspergillus niger KJC3)
ATGCCCCGCCTCCACCCAACAACCATCCTCCTATTCCCCCTCCGCGTCCT
GACCATCCCATTCACAACCCTCATCGCGCGCATTCCCATCCTCCGCTCTC
GACACCGCCGCACCCGCACCCTAACCATGCTCCTCCCTCTACTCGTCTTA
CTCCTCATCCTCCTAACCCTCCTACCTCTATACATAATCTACCGGCCACC
GCACGCCCTAATCCGCTCCCTGGCGAACAAATACCCAGATACATTGTGGG
AGATACCACTCCCCACCACCAAGGACACAGAAGGGAAAGGAACGGAAAAA
GTAATCGCCCTAACCATCGACGACGCCCCCAGCACGTACACGCTCGACAT
CCTACACCTTCTCCAACAACATGACGCGCGGGCGACATTCTTCCTCATCG
GTTCGCAGATCCCCGGCCGGGAGGGGATTCTACATACGCTCGTGAAGAGC
GGGATGGAGCTGGGTAATCATGCGATGCACGATGAGCCGTCTGTTTCGAT
TGGGGAGGAGGTGCTGGAGAGGGAGATGTTGGAGGTGGATGGGGTGATTG
ACAGGGTTTATGAGGAATCTGGGGTGAAGCGGCCACGGTATGAGGACGGG
GCTGTGAAGAAGTGGTTCCGGCCTGGATCGGGGTTCTTTAATGGGTGGAT
GAGGGGGCTTGTGCAGAGACTCGGGTATAAGATTGTGTTGGGGAGTGTGT
ATCCGCATGATGCGCAGATCGGGTGGGCGGGGGTGAATGCGTGGCATGTG
AGGAGTATGGTTAGGGAGGGGAGTATTGTTGTGATGCATGATCGGAGGAG
TTGGACGGTGGAGGGGTTGAGAAGGGTGTTGCCGGTGTTGAAAGAGCGGG
GGTATAGGGTTGTTAGTTTGGGGGAGGCGATGGAAATTGCTAATGCTGCA
TCTACTGACGGAGGAAAGGAGATTGATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011600KJC3_011600Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011600-T1.cdsKJC3_011600-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011600-T1.exon1KJC3_011600-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011600-T1.utr5p1KJC3_011600-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011600-T1KJC3_011600-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteCAZy:CE4
DBxrefInterPro:IPR011330
DBxrefInterPro:IPR002509
DBxrefPFAM:PF01522
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1101328..1102557 -
Powered by Drupal