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KJC3_011603-T1, KJC3_011603-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011603-T1
Unique NameKJC3_011603-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1108215..1110216+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011603-T1 ID=KJC3_011603-T1|Name=KJC3_011603-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2002bp|location=Sequence derived from alignment at ch8:1108215..1110216+ (Aspergillus niger KJC3)
TTATCATTACAACGCGCAAACACACATCTTCTCTCGCCCAATTGCAGAGT
CAACATTCATCATTATCGGGATGTAAAAGTGCACAACAGCCATCCGGCTG
AAGAGGCTCAGTTTGAGCAGATAACTGGATGGTAATCAAGCACTCTATGA
GTATCTCCCGCCATTCAGAACAATTGAAACCGAGTGATATTGCCTCTCAC
GTAAAGTACTCAATGGTAGATGCTAAGAATGGAGCAGTTCTATAGTATCT
CATCTCCGGGGTTCCATCCAGAGAGGTGGACCTCAGTGCTTGTCTAGCAA
CCTAGCGTGGTCTCATTTCTCGTAGGGATCGTGAAGTCAAGAGAATCATG
AACCCCAATCTTCATCCGTTCCAAAAATACCCATTGCGTGGCCTGTTCCA
TGGATTGCTCTGGCTCCCCTTAATCTTCGGCGGACACAAGGCGAGATGGT
CTGGCCCATCCACTCCCATCCACTCCTCCACCGCCTTTCTTCCCCCCACT
TGTTACTTTAGTCCACTGCTTCCACTCCAAAACATTCCTAAACAATTCTC
TCCTCAGCAGTTTCCAGTATTCCTACCGTCTGGTGCGTGATGCTCGATGT
TTCTTAGACTCTCCTGACGAAGACTCACCTTTTTCTAGTCCGTATATCCC
GTTTGCGAGGAGCAACATCAGCATCTCCCCTCCCATCTCCCCCTATCTCC
AAATACCCCACCAACACCAACCATGCCTGAGCACGAAGAAGACCTCGTCG
CCTCCCAGACCGAGGGTTTCAAGGTCGGAGAGAAGAAGACCATTGAAGAG
TACCAGAACCTTGGTATGTGCTATCTACGCTGGCCTACCCGCTCCCGGGC
AATCCCATACCCCTCCCACTCCCCGTGGTAGTAGCCTCGTGGCATCCAGC
ATCGCCGCCGCCTCCCCCCTTGCTTGCTGCCCAGTCCCGTCAAACGTACA
GCGCGAGCATTCCTGATAACCCCACCGTTGAAATTGAATTTGCGTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCCCGCAAACTTGGCTTTTTCTTG
GAATCCTCCACTTGCCTCAAATTTCGTATCTAATTCAAATCCCCCACAGA
CAAGAACGACGAGTCTCTCAACCGCTGGAAGGCCTCTCTGGGTCTGGCCA
CTGGAAATCCCATTGGCGACCCCAATGATCCCAGAAAGTGCATCATCAAG
TCCCTTGCCCTGGAGGTGCAGGGACGTCCCGATGTTGTGATTGACCTGTC
TACTCCCCATGCGCTCGAGACCCTCAAGGACAAGCCCTTCACGATCAAGG
AGGGCGCCACCTTCCACATCAAGGTCGTCTTCCAGGTGCACCATGAGGTT
CTGAGCGGTCTCAAGTACCTGCAGGTGGTGAAGCGCAAGGGTATCAGAGT
TAGCAAGGACGAGGAGATGCTGGTAAGTACTCTCATCTCGACAATCGCAG
GATGTAAGCCATGTACTCACTCGCTTATAGGGAAGCTACGCTCCCAGCAC
CACCGACAAGCCCGTCTACGAGAAGAAGTGTAAGCCACTACCCTACTATA
TGACACAAGTAGAAAGGAAAAAGATATAAAAGTACTAACCCGACGCAGTC
AACGCCGAGGAAGCCCCCTCAGGCATGATGTACCGTGGCCACTACAACGC
CGTGTCCAAGTTCGTCGACGATGACAACCACACCCACCTCCAGTTCGAGT
GGTCCTTCGACATCGCCAAGGACTGGTAGAAAGAATGAAGTGAATTGTGT
CTTTTAGAATAGTCAGTCGGACTGGCTCTGCTTTCTGGCTTTCCCCATCA
CAACTTTCTTTCTTTTCTTCCACCTCATATATGAAACTATGATCTACCTA
CCCTGCCTACACATATCATACTCCATGAGAAGCGCAAACACATCACATCA
TATCCATGCCTTTTCTTCGCAGTTTTACTAGCGTTGGACCTACCTACCCA
CCTATCTGCATCTTACTGTTGTCCGAGTTCTGGAAATACAATATTATATT
TT
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Coding sequence (CDS) from alignment at ch8:1108215..1110216+

>KJC3_011603-T1 ID=KJC3_011603-T1|Name=KJC3_011603-T1|organism=Aspergillus niger KJC3|type=CDS|length=2376bp|location=Sequence derived from alignment at ch8:1108215..1110216+ (Aspergillus niger KJC3)
ATGCCTGAGCACGAAGAAGACCTCGTCGCCTCCCAGACCGAGGGTTTCAA
GGTCGGAGAGAAGAAGACCATTGAAGAGTACCAGAACCTTGACAAGAACG
ACGAGTCTCTCAACCGCTGGAAGGCCTCTCTGGGTCTGGCCACTGGAAAT
CCCATTGGCGACCCCAATGATCCCAGAAAGTGCATCATCAAGTCCCTTGC
CCTGGAGGTGCAGGGACGTCCCGATGTTGTGATTGACCTGTCTACTCCCC
ATGCGCTCGAGACCCTCAAGGACAAGCCCTTCACGATCAAGGAGGGCGCC
ACCTTCCACATCAAGGTCGTCTTCCAGGTGCACCATGAGGTTCTGAGCGG
TCTCAAGTACCTGCAGGTGGTGAAGCGCAAGGGTATCAGAGTTAGCAAGG
ACGAGGAGATGCTGGGAAGCTACGCTCCCAGCACCACCGACAAGCCCGTC
TACGAGAAGAAGTTCAACGCCGAGGAAGCCCCCTCAGGCATGATGTACCG
TGGCCACTACAACGCCGTGTCCAAGTTCGTCGACGATGACAACCACACCC
ACCTCCAGTTCGAGTGGTCCTTCGACATCGCCAAGGACTGGTAGATGCCT
GAGCACGAAGAAGACCTCGTCGCCTCCCAGACCGAGGGTTTCAAGGTCGG
AGAGAAGAAGACCATTGAAGAGTACCAGAACCTTGACAAGAACGACGAGT
CTCTCAACCGCTGGAAGGCCTCTCTGGGTCTGGCCACTGGAAATCCCATT
GGCGACCCCAATGATCCCAGAAAGTGCATCATCAAGTCCCTTGCCCTGGA
GGTGCAGGGACGTCCCGATGTTGTGATTGACCTGTCTACTCCCCATGCGC
TCGAGACCCTCAAGGACAAGCCCTTCACGATCAAGGAGGGCGCCACCTTC
CACATCAAGGTCGTCTTCCAGGTGCACCATGAGGTTCTGAGCGGTCTCAA
GTACCTGCAGGTGGTGAAGCGCAAGGGTATCAGAGTTAGCAAGGACGAGG
AGATGCTGGGAAGCTACGCTCCCAGCACCACCGACAAGCCCGTCTACGAG
AAGAAGTTCAACGCCGAGGAAGCCCCCTCAGGCATGATGTACCGTGGCCA
CTACAACGCCGTGTCCAAGTTCGTCGACGATGACAACCACACCCACCTCC
AGTTCGAGTGGTCCTTCGACATCGCCAAGGACTGGTAGATGCCTGAGCAC
GAAGAAGACCTCGTCGCCTCCCAGACCGAGGGTTTCAAGGTCGGAGAGAA
GAAGACCATTGAAGAGTACCAGAACCTTGACAAGAACGACGAGTCTCTCA
ACCGCTGGAAGGCCTCTCTGGGTCTGGCCACTGGAAATCCCATTGGCGAC
CCCAATGATCCCAGAAAGTGCATCATCAAGTCCCTTGCCCTGGAGGTGCA
GGGACGTCCCGATGTTGTGATTGACCTGTCTACTCCCCATGCGCTCGAGA
CCCTCAAGGACAAGCCCTTCACGATCAAGGAGGGCGCCACCTTCCACATC
AAGGTCGTCTTCCAGGTGCACCATGAGGTTCTGAGCGGTCTCAAGTACCT
GCAGGTGGTGAAGCGCAAGGGTATCAGAGTTAGCAAGGACGAGGAGATGC
TGGGAAGCTACGCTCCCAGCACCACCGACAAGCCCGTCTACGAGAAGAAG
TTCAACGCCGAGGAAGCCCCCTCAGGCATGATGTACCGTGGCCACTACAA
CGCCGTGTCCAAGTTCGTCGACGATGACAACCACACCCACCTCCAGTTCG
AGTGGTCCTTCGACATCGCCAAGGACTGGTAGATGCCTGAGCACGAAGAA
GACCTCGTCGCCTCCCAGACCGAGGGTTTCAAGGTCGGAGAGAAGAAGAC
CATTGAAGAGTACCAGAACCTTGACAAGAACGACGAGTCTCTCAACCGCT
GGAAGGCCTCTCTGGGTCTGGCCACTGGAAATCCCATTGGCGACCCCAAT
GATCCCAGAAAGTGCATCATCAAGTCCCTTGCCCTGGAGGTGCAGGGACG
TCCCGATGTTGTGATTGACCTGTCTACTCCCCATGCGCTCGAGACCCTCA
AGGACAAGCCCTTCACGATCAAGGAGGGCGCCACCTTCCACATCAAGGTC
GTCTTCCAGGTGCACCATGAGGTTCTGAGCGGTCTCAAGTACCTGCAGGT
GGTGAAGCGCAAGGGTATCAGAGTTAGCAAGGACGAGGAGATGCTGGGAA
GCTACGCTCCCAGCACCACCGACAAGCCCGTCTACGAGAAGAAGTTCAAC
GCCGAGGAAGCCCCCTCAGGCATGATGTACCGTGGCCACTACAACGCCGT
GTCCAAGTTCGTCGACGATGACAACCACACCCACCTCCAGTTCGAGTGGT
CCTTCGACATCGCCAAGGACTGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005094Rho GDP-dissociation inhibitor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011603KJC3_011603Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011603-T1KJC3_011603-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011603-T1.utr5p1KJC3_011603-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_011603-T1.utr5p2KJC3_011603-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_011603-T1.utr5p3KJC3_011603-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011603-T1.exon1KJC3_011603-T1.exon1Aspergillus niger KJC3exon
KJC3_011603-T1.exon2KJC3_011603-T1.exon2Aspergillus niger KJC3exon
KJC3_011603-T1.exon3KJC3_011603-T1.exon3Aspergillus niger KJC3exon
KJC3_011603-T1.exon4KJC3_011603-T1.exon4Aspergillus niger KJC3exon
KJC3_011603-T1.exon5KJC3_011603-T1.exon5Aspergillus niger KJC3exon
KJC3_011603-T1.exon6KJC3_011603-T1.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011603-T1.cdsKJC3_011603-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011603-T1.utr3p1KJC3_011603-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264KK7
DBxrefInterPro:IPR014756
DBxrefInterPro:IPR000406
DBxrefInterPro:IPR024792
DBxrefPFAM:PF02115
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1108215..1110216 +
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