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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1122123..1123795+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011609-T1 ID=KJC3_011609-T1|Name=KJC3_011609-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1673bp|location=Sequence derived from alignment at ch8:1122123..1123795+ (Aspergillus niger KJC3)
GTTTCTCACAGTCCAAGCTAAGATGGTGAGCCGCAGGGATCACTCGAACA
CGATCAAGGCAGAGTGGTGGCGAGATTGATGCCCGCTCGATGGATGTTAT
GATGATTGTTTACTGCGCAGGACTCGCATGGCAACCAGAAGTGGACTAGC
GCGGTTGGAGAGGGGCACTACGGACAAACAATGCAAACCTACTCCACGCT
TCCCTTTTTCGATGACTCTTTGCGGCGGCCACAGCGGAATTACCTGTGAT
TTGTAAATCAGTGTTAGAGAGAGCTCTTTTGCCGTGAACGCGAGATTTTC
CAGCTCACGTCTCTCATATCCTCGGCGTATCATAGCTTCTCGGCGATTTT
CAGACATCATGGCAGCTCCCACATCAGGCTCATCGGCCGCCGCCAAGCCG
TTCGAGTAAGTCACCTACTTCACAACCAGGAAGTCCTAGTCCTTTGGATC
ACTAATATATCTTCTTTCTAGCATTGTCGCGACATACAATGACTTGCTCC
GCTCCGATCCAGACCTCACTATGCCAATTGCAGCTATCGAAGCTCTGGTA
CTACTCCTTACAAACTCTCCCTCCTCGACGATATCCGAGACGCTCGACCT
TCTCGAGAAATCCACTGCACACCTGAAACAGTCGATCCCGAACCCCATTG
GTCTCTCTGCTGGAACCGACCTCTTCCAGCGATACCTGATTACTACCCTG
CAGAGACCCGGACAGCTCGGGCCCGCAGGTGATTTCAACGCGATCAGGGC
GCATCTTCTGTCGAACGGACGGTTGTTTATCAGACGTGCGAAAGAGAGTC
GGGACAAGATCGCGGCGTTTGGACGAGGCTTTGTACGCGATGGAAGCACG
GTTCTGACGAATGGAGGATCACGAGTTGTCGCTTCGTTGCTACAGAAGGC
CGCGGACGAGAAGGGCGGCCCGTCAGCCGTGCGGTTCAAGGTGATCTATG
TCCTGTCATCGGCGAAGGGGACTGGCGCGCATCCCGATGAGCCGGAGGGT
ATGGAGACTGTGCGCGCTCTCCGGGCGAAGGGTGTTCCTGTCGCTACGAT
CCCGGAGTCGGCTGTTGCCTACTCGATGGGCAAGGCCGATACTGTCATCG
TTGGTGCCGAGGGTGTGGTTGAAAACGGTGGTATCGTGTCGCGCATGGGA
ACCTACCAGATCGGTCTTCTTGCGAAGGCTATGGGCAAACCCTTTTACGT
TGTGGCGGAGAGCCACAAGTTCGTCCGTATCTACCCGCTCAGCCAGTATG
ATTTGCCTATTGAGCAGCGCGTGATCGATTTCAAGACTGAAGAAGATGTC
GCCGACGAGGCGAAGCAACAGCAAGCTTTGTCTACGGATACAGTCGATGC
CAAGGCCGTCAACACGGCGGACAGCGCTGATGTAGTTGACTTCACTCCCC
CCCATCTGATCTCTGCCTTGATTACGGACAGCGGTGTTTTGACACCAAGT
GCGGTCAGTGAGGAGCTGATTAAGATTTGGTTCTAATTCTCCATTTCCAT
TCCGCGCTCTTCCATACAGGCATGAGACGTGGAGCTTGTGATGTCTTTTA
AAAACTAAATGAAGCGGATTGGCGTTAAGGTCATGATATCTCCGGACGCT
TAAGGTGTTTATTGGTTTGCAATGTGTTGTCTATCTGCAAATCTCAAAGA
AAATACAACTGAATAGATCTAGA back to topCoding sequence (CDS) from alignment at ch8:1122123..1123795+ >KJC3_011609-T1 ID=KJC3_011609-T1|Name=KJC3_011609-T1|organism=Aspergillus niger KJC3|type=CDS|length=2124bp|location=Sequence derived from alignment at ch8:1122123..1123795+ (Aspergillus niger KJC3)
ATGGCAGCTCCCACATCAGGCTCATCGGCCGCCGCCAAGCCGTTCGACAT
TGTCGCGACATACAATGACTTGCTCCGCTCCGATCCAGACCTCACTATGC
CAATTGCAGCTATCGAAGCTCTGGTACTACTCCTTACAAACTCTCCCTCC
TCGACGATATCCGAGACGCTCGACCTTCTCGAGAAATCCACTGCACACCT
GAAACAGTCGATCCCGAACCCCATTGGTCTCTCTGCTGGAACCGACCTCT
TCCAGCGATACCTGATTACTACCCTGCAGAGACCCGGACAGCTCGGGCCC
GCAGGTGATTTCAACGCGATCAGGGCGCATCTTCTGTCGAACGGACGGTT
GTTTATCAGACGTGCGAAAGAGAGTCGGGACAAGATCGCGGCGTTTGGAC
GAGGCTTTGTACGCGATGGAAGCACGGTTCTGACGAATGGAGGATCACGA
GTTGTCGCTTCGTTGCTACAGAAGGCCGCGGACGAGAAGGGCGGCCCGTC
AGCCGTGCGGTTCAAGGTGATCTATGTCCTGTCATCGGCGAAGGGGACTG
GCGCGCATCCCGATGAGCCGGAGGGTATGGAGACTGTGCGCGCTCTCCGG
GCGAAGGGTGTTCCTGTCGCTACGATCCCGGAGTCGGCTGTTGCCTACTC
GATGGGCAAGGCCGATACTGTCATCGTTGGTGCCGAGGGTGTGGTTGAAA
ACGGTGGTATCGTGTCGCGCATGGGAACCTACCAGATCGGTCTTCTTGCG
AAGGCTATGGGCAAACCCTTTTACGTTGTGGCGGAGAGCCACAAGTTCGT
CCGTATCTACCCGCTCAGCCAGTATGATTTGCCTATTGAGCAGCGCGTGA
TCGATTTCAAGACTGAAGAAGATGTCGCCGACGAGGCGAAGCAACAGCAA
GCTTTGTCTACGGATACAGTCGATGCCAAGGCCGTCAACACGGCGGACAG
CGCTGATGTAGTTGACTTCACTCCCCCCCATCTGATCTCTGCCTTGATTA
CGGACAGCGGTGTTTTGACACCAAGTGCGGTCAGTGAGGAGCTGATTAAG
ATTTGGTTCTAAATGGCAGCTCCCACATCAGGCTCATCGGCCGCCGCCAA
GCCGTTCGACATTGTCGCGACATACAATGACTTGCTCCGCTCCGATCCAG
ACCTCACTATGCCAATTGCAGCTATCGAAGCTCTGGTACTACTCCTTACA
AACTCTCCCTCCTCGACGATATCCGAGACGCTCGACCTTCTCGAGAAATC
CACTGCACACCTGAAACAGTCGATCCCGAACCCCATTGGTCTCTCTGCTG
GAACCGACCTCTTCCAGCGATACCTGATTACTACCCTGCAGAGACCCGGA
CAGCTCGGGCCCGCAGGTGATTTCAACGCGATCAGGGCGCATCTTCTGTC
GAACGGACGGTTGTTTATCAGACGTGCGAAAGAGAGTCGGGACAAGATCG
CGGCGTTTGGACGAGGCTTTGTACGCGATGGAAGCACGGTTCTGACGAAT
GGAGGATCACGAGTTGTCGCTTCGTTGCTACAGAAGGCCGCGGACGAGAA
GGGCGGCCCGTCAGCCGTGCGGTTCAAGGTGATCTATGTCCTGTCATCGG
CGAAGGGGACTGGCGCGCATCCCGATGAGCCGGAGGGTATGGAGACTGTG
CGCGCTCTCCGGGCGAAGGGTGTTCCTGTCGCTACGATCCCGGAGTCGGC
TGTTGCCTACTCGATGGGCAAGGCCGATACTGTCATCGTTGGTGCCGAGG
GTGTGGTTGAAAACGGTGGTATCGTGTCGCGCATGGGAACCTACCAGATC
GGTCTTCTTGCGAAGGCTATGGGCAAACCCTTTTACGTTGTGGCGGAGAG
CCACAAGTTCGTCCGTATCTACCCGCTCAGCCAGTATGATTTGCCTATTG
AGCAGCGCGTGATCGATTTCAAGACTGAAGAAGATGTCGCCGACGAGGCG
AAGCAACAGCAAGCTTTGTCTACGGATACAGTCGATGCCAAGGCCGTCAA
CACGGCGGACAGCGCTGATGTAGTTGACTTCACTCCCCCCCATCTGATCT
CTGCCTTGATTACGGACAGCGGTGTTTTGACACCAAGTGCGGTCAGTGAG
GAGCTGATTAAGATTTGGTTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0044237 | cellular metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011609-T1.utr3p1 | KJC3_011609-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262X8R |
| DBxref | InterPro:IPR037171 |
| DBxref | InterPro:IPR042528 |
| DBxref | InterPro:IPR042529 |
| DBxref | InterPro:IPR000649 |
| DBxref | PFAM:PF01008 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1122123..1123795 + |
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