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KJC3_011611-T1, KJC3_011611-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011611-T1
Unique NameKJC3_011611-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1127533..1129415-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011611-T1 ID=KJC3_011611-T1|Name=KJC3_011611-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1883bp|location=Sequence derived from alignment at ch8:1127533..1129415- (Aspergillus niger KJC3)
ATCATCCTCGTCTGCTTTGTTCCGTGTTTCTCCCATCTTGTATCCTCGGC
CTTCCAGGATGGGTGCTCAATAGCTCCCGGTTTGCTAGATTGCTCTTGAA
GACTCACATTGCCAATCGACTTGAATGTGCCTTGAATTTCTCTCGCCTTC
CCACCCACCATCAGCTTCCGGACTTGGTCAACTAACCCACACCTTCCCTC
CCTCCCTGTGACCACCTTATCACTCCACCCACGTGAGCCACCGAGTGGCT
TATCTATCGCTCTAGTTACCTCCTCTACCTCCTCCCCTGCTTCGTACCAT
TCAACAACCACTTTTTTGTCCCCCCATATTCTTATCAGGCTCCGGGCATC
ATGGCGAACAAGGCTGCTGTTCCGTTCCTGGTGACGATGATGCTCGTCAC
TGGGGTGTGCAACACCATCCTCAACAAATACCAGGTTGGACTTCCTTACT
GTGGTCTACCACACCTCTTGGCTCACCCGACGAACAGGACATGCAATGTG
TATGGAATTGCGATTCGCCCTCTCCCAAATACCGTCGCACCTTTGAGCAA
CCTGTCATCCAAACGTAGGCATTCCCCTCTTTGTGCTAGCTTGCATGCTC
CGGCTCACAATCTCCCTTGGACGGCAGTATCCAGATGTTCACCGGAGAAA
TGGGATGCTGGCTGGTGATCCTCATGACCCATCTGTATCAACGGTATATT
GCCCCGCGCTTGTCCAACAACTCTTCGCCTCTTCTAGCTGGTGGCTATCA
CCCTGTCAATAACACTGAAGGACTCGACGAGGAGGAAGATTATACAATCA
GAGGACCAGAAGCTTCAAATGATGTCACGAAGCCCGCCACTTTAGCAGAC
GGTCGCATTCACCTTCGTGGATACAAGATCTTTCTTCTTGCTGCACCAGC
ATGTTGCGACATTGCGGGCACAACTCTGATGAACGTCGGGTTGCTCTTCG
TCGCTGCCAGTGTCTACCAGATGACTCGCGGCGCCCTCGTTTTATTCGTC
GGCCTCTTTAGTGTTCTTTTTCTCCACCGCAAACTTCATCTCTATCATTG
GCTGGCGCTGTTCATTGTGGTCCTAGGTGTTGCTCTGGTCGGTCTTGCAG
GTGCCCTCTTCGCGGACAACCAAGGACACGACGTCACCCAAGGAAGTGCT
GCCACCGTCATGACCCATGCTATCAGGGAAATCCAGGCCACAACGCGGTC
TCCGGAAGCACTGAAAGCTGTCGTTGGGGTGCTGCTTATAGCTGCAGCCC
AGATCTTCACTGCGTCCCAATTCGTCCTGGAAGAGTGGATCTTGGAAAAC
TATGAAATGGACCCCCTACAGGTTGTTGGCTGGGAAGGTATTTTCGGGTT
CTCTGTCACCGTCATCGGCTCGATCATCTTGTACTTGACCATTGGACGCA
CCGAGGCCGGCCGCTACGGCTACTTCGATGCAAAGGAAGGATGGAGCCAG
GTCTTCAACAACCGAGCAATTGCCATGTCCAGTTTCTTGATTATGATTAG
CATTGGGTGAGTTTCCTCCTAACCTTCCTCCTTATTCATCTACAGCATAC
TAACCACGACTGCCTCAGCGGATTCAACTTCTTCGGTCTCTCCGTCACCC
GCACCGTATCCGCTACTTCCCGCAGCACAATCGACACCTGCCGGACCCTT
TTCATCTGGCTCGTCTCCCTCGCTCTGGGCTGGGAGACTTTCAAATGGCT
ACAAGTCGTCGGCTTCGCGCTCCTCGTTTACGGAACTTTCCTCTTTAACG
ACATTGTCCGCCCGCCGCTCAAAGCCTGCCTTCCTAGTTCTCGCCGCGAC
CGAGAAATTCTCCTCCCTGAAGAGCCGATCGAGCATATGTAAGTTGTTCG
GCTCATATCATCTTGCATACACATCATACGTCC
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Coding sequence (CDS) from alignment at ch8:1127533..1129415-

>KJC3_011611-T1 ID=KJC3_011611-T1|Name=KJC3_011611-T1|organism=Aspergillus niger KJC3|type=CDS|length=5256bp|location=Sequence derived from alignment at ch8:1127533..1129415- (Aspergillus niger KJC3)
CGGATTCAACTTCTTCGGTCTCTCCGTCACCCGCACCGTATCCGCTACTT
CCCGCAGCACAATCGACACCTGCCGGACCCTTTTCATCTGGCTCGTCTCC
CTCGCTCTGGGCTGGGAGACTTTCAAATGGCTACAAGTCGTCGGCTTCGC
GCTCCTCGTTTACGGAACTTTCCTCTTTAACGACATTGTCCGCCCGCCGC
TCAAAGCCTGCCTTCCTAGTTCTCGCCGCGACCGAGAAATTCTCCTCCCT
GAAGAGCCGATCGAGCATATGTAATATCCAGATGTTCACCGGAGAAATGG
GATGCTGGCTGGTGATCCTCATGACCCATCTGTATCAACGGTATATTGCC
CCGCGCTTGTCCAACAACTCTTCGCCTCTTCTAGCTGGTGGCTATCACCC
TGTCAATAACACTGAAGGACTCGACGAGGAGGAAGATTATACAATCAGAG
GACCAGAAGCTTCAAATGATGTCACGAAGCCCGCCACTTTAGCAGACGGT
CGCATTCACCTTCGTGGATACAAGATCTTTCTTCTTGCTGCACCAGCATG
TTGCGACATTGCGGGCACAACTCTGATGAACGTCGGGTTGCTCTTCGTCG
CTGCCAGTGTCTACCAGATGACTCGCGGCGCCCTCGTTTTATTCGTCGGC
CTCTTTAGTGTTCTTTTTCTCCACCGCAAACTTCATCTCTATCATTGGCT
GGCGCTGTTCATTGTGGTCCTAGGTGTTGCTCTGGTCGGTCTTGCAGGTG
CCCTCTTCGCGGACAACCAAGGACACGACGTCACCCAAGGAAGTGCTGCC
ACCGTCATGACCCATGCTATCAGGGAAATCCAGGCCACAACGCGGTCTCC
GGAAGCACTGAAAGCTGTCGTTGGGGTGCTGCTTATAGCTGCAGCCCAGA
TCTTCACTGCGTCCCAATTCGTCCTGGAAGAGTGGATCTTGGAAAACTAT
GAAATGGACCCCCTACAGGTTGTTGGCTGGGAAGGTATTTTCGGGTTCTC
TGTCACCGTCATCGGCTCGATCATCTTGTACTTGACCATTGGACGCACCG
AGGCCGGCCGCTACGGCTACTTCGATGCAAAGGAAGGATGGAGCCAGGTC
TTCAACAACCGAGCAATTGCCATGTCCAGTTTCTTGATTATGATTAGCAT
TGGGACATGCAATGTGTATGGAATTGCGATTCGCCCTCTCCCAAATACCG
TCGCACCTTTGAGCAACCTGTCATCCAAACATGGCGAACAAGGCTGCTGT
TCCGTTCCTGGTGACGATGATGCTCGTCACTGGGGTGTGCAACACCATCC
TCAACAAATACCAGCGGATTCAACTTCTTCGGTCTCTCCGTCACCCGCAC
CGTATCCGCTACTTCCCGCAGCACAATCGACACCTGCCGGACCCTTTTCA
TCTGGCTCGTCTCCCTCGCTCTGGGCTGGGAGACTTTCAAATGGCTACAA
GTCGTCGGCTTCGCGCTCCTCGTTTACGGAACTTTCCTCTTTAACGACAT
TGTCCGCCCGCCGCTCAAAGCCTGCCTTCCTAGTTCTCGCCGCGACCGAG
AAATTCTCCTCCCTGAAGAGCCGATCGAGCATATGTAATATCCAGATGTT
CACCGGAGAAATGGGATGCTGGCTGGTGATCCTCATGACCCATCTGTATC
AACGGTATATTGCCCCGCGCTTGTCCAACAACTCTTCGCCTCTTCTAGCT
GGTGGCTATCACCCTGTCAATAACACTGAAGGACTCGACGAGGAGGAAGA
TTATACAATCAGAGGACCAGAAGCTTCAAATGATGTCACGAAGCCCGCCA
CTTTAGCAGACGGTCGCATTCACCTTCGTGGATACAAGATCTTTCTTCTT
GCTGCACCAGCATGTTGCGACATTGCGGGCACAACTCTGATGAACGTCGG
GTTGCTCTTCGTCGCTGCCAGTGTCTACCAGATGACTCGCGGCGCCCTCG
TTTTATTCGTCGGCCTCTTTAGTGTTCTTTTTCTCCACCGCAAACTTCAT
CTCTATCATTGGCTGGCGCTGTTCATTGTGGTCCTAGGTGTTGCTCTGGT
CGGTCTTGCAGGTGCCCTCTTCGCGGACAACCAAGGACACGACGTCACCC
AAGGAAGTGCTGCCACCGTCATGACCCATGCTATCAGGGAAATCCAGGCC
ACAACGCGGTCTCCGGAAGCACTGAAAGCTGTCGTTGGGGTGCTGCTTAT
AGCTGCAGCCCAGATCTTCACTGCGTCCCAATTCGTCCTGGAAGAGTGGA
TCTTGGAAAACTATGAAATGGACCCCCTACAGGTTGTTGGCTGGGAAGGT
ATTTTCGGGTTCTCTGTCACCGTCATCGGCTCGATCATCTTGTACTTGAC
CATTGGACGCACCGAGGCCGGCCGCTACGGCTACTTCGATGCAAAGGAAG
GATGGAGCCAGGTCTTCAACAACCGAGCAATTGCCATGTCCAGTTTCTTG
ATTATGATTAGCATTGGGACATGCAATGTGTATGGAATTGCGATTCGCCC
TCTCCCAAATACCGTCGCACCTTTGAGCAACCTGTCATCCAAACATGGCG
AACAAGGCTGCTGTTCCGTTCCTGGTGACGATGATGCTCGTCACTGGGGT
GTGCAACACCATCCTCAACAAATACCAGCGGATTCAACTTCTTCGGTCTC
TCCGTCACCCGCACCGTATCCGCTACTTCCCGCAGCACAATCGACACCTG
CCGGACCCTTTTCATCTGGCTCGTCTCCCTCGCTCTGGGCTGGGAGACTT
TCAAATGGCTACAAGTCGTCGGCTTCGCGCTCCTCGTTTACGGAACTTTC
CTCTTTAACGACATTGTCCGCCCGCCGCTCAAAGCCTGCCTTCCTAGTTC
TCGCCGCGACCGAGAAATTCTCCTCCCTGAAGAGCCGATCGAGCATATGT
AATATCCAGATGTTCACCGGAGAAATGGGATGCTGGCTGGTGATCCTCAT
GACCCATCTGTATCAACGGTATATTGCCCCGCGCTTGTCCAACAACTCTT
CGCCTCTTCTAGCTGGTGGCTATCACCCTGTCAATAACACTGAAGGACTC
GACGAGGAGGAAGATTATACAATCAGAGGACCAGAAGCTTCAAATGATGT
CACGAAGCCCGCCACTTTAGCAGACGGTCGCATTCACCTTCGTGGATACA
AGATCTTTCTTCTTGCTGCACCAGCATGTTGCGACATTGCGGGCACAACT
CTGATGAACGTCGGGTTGCTCTTCGTCGCTGCCAGTGTCTACCAGATGAC
TCGCGGCGCCCTCGTTTTATTCGTCGGCCTCTTTAGTGTTCTTTTTCTCC
ACCGCAAACTTCATCTCTATCATTGGCTGGCGCTGTTCATTGTGGTCCTA
GGTGTTGCTCTGGTCGGTCTTGCAGGTGCCCTCTTCGCGGACAACCAAGG
ACACGACGTCACCCAAGGAAGTGCTGCCACCGTCATGACCCATGCTATCA
GGGAAATCCAGGCCACAACGCGGTCTCCGGAAGCACTGAAAGCTGTCGTT
GGGGTGCTGCTTATAGCTGCAGCCCAGATCTTCACTGCGTCCCAATTCGT
CCTGGAAGAGTGGATCTTGGAAAACTATGAAATGGACCCCCTACAGGTTG
TTGGCTGGGAAGGTATTTTCGGGTTCTCTGTCACCGTCATCGGCTCGATC
ATCTTGTACTTGACCATTGGACGCACCGAGGCCGGCCGCTACGGCTACTT
CGATGCAAAGGAAGGATGGAGCCAGGTCTTCAACAACCGAGCAATTGCCA
TGTCCAGTTTCTTGATTATGATTAGCATTGGGACATGCAATGTGTATGGA
ATTGCGATTCGCCCTCTCCCAAATACCGTCGCACCTTTGAGCAACCTGTC
ATCCAAACATGGCGAACAAGGCTGCTGTTCCGTTCCTGGTGACGATGATG
CTCGTCACTGGGGTGTGCAACACCATCCTCAACAAATACCAGCGGATTCA
ACTTCTTCGGTCTCTCCGTCACCCGCACCGTATCCGCTACTTCCCGCAGC
ACAATCGACACCTGCCGGACCCTTTTCATCTGGCTCGTCTCCCTCGCTCT
GGGCTGGGAGACTTTCAAATGGCTACAAGTCGTCGGCTTCGCGCTCCTCG
TTTACGGAACTTTCCTCTTTAACGACATTGTCCGCCCGCCGCTCAAAGCC
TGCCTTCCTAGTTCTCGCCGCGACCGAGAAATTCTCCTCCCTGAAGAGCC
GATCGAGCATATGTAATATCCAGATGTTCACCGGAGAAATGGGATGCTGG
CTGGTGATCCTCATGACCCATCTGTATCAACGGTATATTGCCCCGCGCTT
GTCCAACAACTCTTCGCCTCTTCTAGCTGGTGGCTATCACCCTGTCAATA
ACACTGAAGGACTCGACGAGGAGGAAGATTATACAATCAGAGGACCAGAA
GCTTCAAATGATGTCACGAAGCCCGCCACTTTAGCAGACGGTCGCATTCA
CCTTCGTGGATACAAGATCTTTCTTCTTGCTGCACCAGCATGTTGCGACA
TTGCGGGCACAACTCTGATGAACGTCGGGTTGCTCTTCGTCGCTGCCAGT
GTCTACCAGATGACTCGCGGCGCCCTCGTTTTATTCGTCGGCCTCTTTAG
TGTTCTTTTTCTCCACCGCAAACTTCATCTCTATCATTGGCTGGCGCTGT
TCATTGTGGTCCTAGGTGTTGCTCTGGTCGGTCTTGCAGGTGCCCTCTTC
GCGGACAACCAAGGACACGACGTCACCCAAGGAAGTGCTGCCACCGTCAT
GACCCATGCTATCAGGGAAATCCAGGCCACAACGCGGTCTCCGGAAGCAC
TGAAAGCTGTCGTTGGGGTGCTGCTTATAGCTGCAGCCCAGATCTTCACT
GCGTCCCAATTCGTCCTGGAAGAGTGGATCTTGGAAAACTATGAAATGGA
CCCCCTACAGGTTGTTGGCTGGGAAGGTATTTTCGGGTTCTCTGTCACCG
TCATCGGCTCGATCATCTTGTACTTGACCATTGGACGCACCGAGGCCGGC
CGCTACGGCTACTTCGATGCAAAGGAAGGATGGAGCCAGGTCTTCAACAA
CCGAGCAATTGCCATGTCCAGTTTCTTGATTATGATTAGCATTGGGACAT
GCAATGTGTATGGAATTGCGATTCGCCCTCTCCCAAATACCGTCGCACCT
TTGAGCAACCTGTCATCCAAACATGGCGAACAAGGCTGCTGTTCCGTTCC
TGGTGACGATGATGCTCGTCACTGGGGTGTGCAACACCATCCTCAACAAA
TACCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0000139Golgi membrane
Vocabulary: Biological Process
TermDefinition
GO:0090481pyrimidine nucleotide-sugar transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015165pyrimidine nucleotide-sugar transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011611KJC3_011611Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011611-T1KJC3_011611-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011611-T1.cdsKJC3_011611-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011611-T1.utr3p1KJC3_011611-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011611-T1.exon4KJC3_011611-T1.exon4Aspergillus niger KJC3exon
KJC3_011611-T1.exon3KJC3_011611-T1.exon3Aspergillus niger KJC3exon
KJC3_011611-T1.exon2KJC3_011611-T1.exon2Aspergillus niger KJC3exon
KJC3_011611-T1.exon1KJC3_011611-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011611-T1.utr5p1KJC3_011611-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
DBxrefInterPro:IPR012404
DBxrefInterPro:IPR007271
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1127533..1129415 -
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