|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1138856..1141408+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011613-T1 ID=KJC3_011613-T1|Name=KJC3_011613-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2553bp|location=Sequence derived from alignment at ch8:1138856..1141408+ (Aspergillus niger KJC3)
AGCATCGACCAACAACGACGAGCTTTGGGAAATGAGATGATCCATAAAAC
TGTCCTCGTTTCCATTATCGACTCTCTGTCTGTCCGGTCCCTTTTTTCGC
GTCCTGTCTAACTTCCAAACCCTTCTTTGCATGCTTCTGCAACCCCCCTG
GATCTTTGGGTCAAAAAGTCCCTCTTTTAGTTGACTTACGATGATTATTA
TTGATTGACTGATCCGATCGATCAAGACCCTGGATTTCCCCGTACTAGTT
ACTCCTCCTACCTCCTTCGTCCACTGCCGCATGTCGAACGCCCCTCCAGA
ATCGCCATGATTTCCGCATCACCTGTTCCCGTGGGGTCCAGCGTCTTTTT
TACTTTGGCCCTCCTTACGATCTCCGTGCTAGTTCTGTTACTTCTGCGGC
GCTTTCTCACTCTCCGCGCGACTCCGGCCTACCTTTCAATCCCCGTCTTC
CTTGCACTCGCGCTTCCGGCCAGTGTAGTTCTTCTGGTCCCCATTGACCT
AGCATCAAGCTCACGCGATGGCGGAGGCCCCACGGCTATTTGGCTACCCG
ACCGCCTAATTCTCGTCTCCTGGCGCATTGCTTACTGGCTAATCTTTGTG
CTGACATGGTAGGTGATGTGCAGCACGATGTATCCGGTCGCGACCGTCTC
AATTTAGATCAACACTGACTCTTTACTTCGTCTCAGGGCCATCCTTCCTT
TACTCGGAGAATACATTGATTCGGGTTACCGTGAGCCGAAGGGTCGCATT
CAATACTCCATTCGTTCCAATGCGCGGTATCAACTGATCGTGCTGTGCTG
TGCAACGGTCGGATTAATCTACATTTCGATCCAGAATGGCTTTGAATTCA
CCTCGATTAAGACGCTAGTGATGGCTCTTGCATATGTTTGGGGTCTGGTT
CTGGCCATCTATCTGATGGGTCACGGACTTGTTTCCATTCCCCGCACGCT
CTTCCGTAACTCCAACGTCAGTGGTCGTCTGCGGAGGATCCAAGCACATG
CTCCGAAGCTGCACGACCGTTTGATGGACGCGATCAATGACCTGGAAAGC
CTGGAATCGCAAGTCGCCCAACTGCAGCGTCGCAAAACGGGCACCGCTCG
CGATTTTCAAGAGTGGATTGATGAATTGGCAGAGACGTCGAACCCGCCCG
AGCTGCGTTCGGGGCTCTTAGAACAGGCGGATGGGCCCGGCACTATCCCT
GCCGTCATTACTGAACGTTACCTTGCGGACTTGACCCGTCGTCTTCAGCG
CGCTCGGCATCAAAAGGCTCGCTTCGTCGACGAGTGGGATCGCTTGGTCT
TATCCGCAGCAGACATGCAGGCAATTATCAATTCGTCGGCTTCTAAGAAG
CTCGAGTTTATTCACTCCCCCCATCGATCATCTTGGCTCCCGAGCCTTAA
CTTTCTGAGTCCATACATGCGATACCATCTCTATGTGCATGTTATTCCAA
ACGTGCGACTTGGACTAGGCGCGGTTTTCTCGGCGGCCTCCGTGTGCGTT
GTCTGGTCGGAGTTGGTCAAGTCCTTGGCGCCTCGGCTATCCGTCGTGAC
GCTTTCTGTGGTTTCCTACCACAAGGAACCGGCGCCGGTCGACTTTGGGC
GCCAATTGATTGCCTCTGCTTGGCTGCTGTACATGTGCTCGGCAGCATTG
GTGGGTGTCAACGACGCCAAAGTGTGGGGCAACCGTGCTTTGGTCCGCCG
AAACACGTACGGGGAGAGTGCCTGTTGGTATGCGGGGCTAGTGGCCAGAC
TGACCGTTCCCATCGCATACAACTTCTTGACCTTTTTGCCTGCGACCGTC
CGGCAAAGCACCACTTTCTACAAGTTCTTGGGCCGGTTCATTGACCTTAC
CCCGCTCGGAAAGGGCTTTGATTACTTTTTCCCGGTCTTCATTCTGGTTC
CTATCGGTGCCACCCTTTTCAACCTCTACGGTCGCGTCCAGAATATCTGC
AGCTGGGGTCTTCTGGAAGAGGATGATGATGACCTGGAGAATAACCCCGG
TGGCTACGGGCTAGGCGGATGGCGAGAGGGACGTGATCTTATCGACCGGG
AGCTCAACGGCCTCGGTTCTTTGGGACTCTCCCCTCGTGGCGGTCGGTCA
CCTCGCCCGTCCAGTCGCATTGACGATGACACGCCAGCCTTCTCCTCCTC
CCGCACCGCACTCCTAGAGAATTCTAGAACCCCTCGAGCCTCCAGGGGAA
CACCAGCCACCACTCCTTTAATGGAGGATGAGGATGAAGATAACTTTTTC
CAGTCCTTTGCTCACCGAGTAAGAAACACTTTCGAGACCGCCAGCAAGCC
CCAGTGGCTGCAGGGCGACTCCTTCCGTCTCCCCAGATGGATGGGCAGCG
AAAGCAATGAGGGCGATAGCGGACTGGCGAGGTGGTTTGGTGGTCGACCA
GCACCTGGCGGAGTCCGACTGTAAGAACACTGACCGGTCGGTGATGTAAC
CTGACTTGCTGCATGGCGAAGGCGTTGCTGGTAGACACTCTTACATGGTA
ATGTTTATAGATGTACATAGTATATATAGCTCTGAATGACAGCTTTGCGC
TTA back to topCoding sequence (CDS) from alignment at ch8:1138856..1141408+ >KJC3_011613-T1 ID=KJC3_011613-T1|Name=KJC3_011613-T1|organism=Aspergillus niger KJC3|type=CDS|length=4080bp|location=Sequence derived from alignment at ch8:1138856..1141408+ (Aspergillus niger KJC3)
ATGATTTCCGCATCACCTGTTCCCGTGGGGTCCAGCGTCTTTTTTACTTT
GGCCCTCCTTACGATCTCCGTGCTAGTTCTGTTACTTCTGCGGCGCTTTC
TCACTCTCCGCGCGACTCCGGCCTACCTTTCAATCCCCGTCTTCCTTGCA
CTCGCGCTTCCGGCCAGTGTAGTTCTTCTGGTCCCCATTGACCTAGCATC
AAGCTCACGCGATGGCGGAGGCCCCACGGCTATTTGGCTACCCGACCGCC
TAATTCTCGTCTCCTGGCGCATTGCTTACTGGCTAATCTTTGTGCTGACA
TGGGCCATCCTTCCTTTACTCGGAGAATACATTGATTCGGGTTACCGTGA
GCCGAAGGGTCGCATTCAATACTCCATTCGTTCCAATGCGCGGTATCAAC
TGATCGTGCTGTGCTGTGCAACGGTCGGATTAATCTACATTTCGATCCAG
AATGGCTTTGAATTCACCTCGATTAAGACGCTAGTGATGGCTCTTGCATA
TGTTTGGGGTCTGGTTCTGGCCATCTATCTGATGGGTCACGGACTTGTTT
CCATTCCCCGCACGCTCTTCCGTAACTCCAACGTCAGTGGTCGTCTGCGG
AGGATCCAAGCACATGCTCCGAAGCTGCACGACCGTTTGATGGACGCGAT
CAATGACCTGGAAAGCCTGGAATCGCAAGTCGCCCAACTGCAGCGTCGCA
AAACGGGCACCGCTCGCGATTTTCAAGAGTGGATTGATGAATTGGCAGAG
ACGTCGAACCCGCCCGAGCTGCGTTCGGGGCTCTTAGAACAGGCGGATGG
GCCCGGCACTATCCCTGCCGTCATTACTGAACGTTACCTTGCGGACTTGA
CCCGTCGTCTTCAGCGCGCTCGGCATCAAAAGGCTCGCTTCGTCGACGAG
TGGGATCGCTTGGTCTTATCCGCAGCAGACATGCAGGCAATTATCAATTC
GTCGGCTTCTAAGAAGCTCGAGTTTATTCACTCCCCCCATCGATCATCTT
GGCTCCCGAGCCTTAACTTTCTGAGTCCATACATGCGATACCATCTCTAT
GTGCATGTTATTCCAAACGTGCGACTTGGACTAGGCGCGGTTTTCTCGGC
GGCCTCCGTGTGCGTTGTCTGGTCGGAGTTGGTCAAGTCCTTGGCGCCTC
GGCTATCCGTCGTGACGCTTTCTGTGGTTTCCTACCACAAGGAACCGGCG
CCGGTCGACTTTGGGCGCCAATTGATTGCCTCTGCTTGGCTGCTGTACAT
GTGCTCGGCAGCATTGGTGGGTGTCAACGACGCCAAAGTGTGGGGCAACC
GTGCTTTGGTCCGCCGAAACACGTACGGGGAGAGTGCCTGTTGGTATGCG
GGGCTAGTGGCCAGACTGACCGTTCCCATCGCATACAACTTCTTGACCTT
TTTGCCTGCGACCGTCCGGCAAAGCACCACTTTCTACAAGTTCTTGGGCC
GGTTCATTGACCTTACCCCGCTCGGAAAGGGCTTTGATTACTTTTTCCCG
GTCTTCATTCTGGTTCCTATCGGTGCCACCCTTTTCAACCTCTACGGTCG
CGTCCAGAATATCTGCAGCTGGGGTCTTCTGGAAGAGGATGATGATGACC
TGGAGAATAACCCCGGTGGCTACGGGCTAGGCGGATGGCGAGAGGGACGT
GATCTTATCGACCGGGAGCTCAACGGCCTCGGTTCTTTGGGACTCTCCCC
TCGTGGCGGTCGGTCACCTCGCCCGTCCAGTCGCATTGACGATGACACGC
CAGCCTTCTCCTCCTCCCGCACCGCACTCCTAGAGAATTCTAGAACCCCT
CGAGCCTCCAGGGGAACACCAGCCACCACTCCTTTAATGGAGGATGAGGA
TGAAGATAACTTTTTCCAGTCCTTTGCTCACCGAGTAAGAAACACTTTCG
AGACCGCCAGCAAGCCCCAGTGGCTGCAGGGCGACTCCTTCCGTCTCCCC
AGATGGATGGGCAGCGAAAGCAATGAGGGCGATAGCGGACTGGCGAGGTG
GTTTGGTGGTCGACCAGCACCTGGCGGAGTCCGACTGTAAATGATTTCCG
CATCACCTGTTCCCGTGGGGTCCAGCGTCTTTTTTACTTTGGCCCTCCTT
ACGATCTCCGTGCTAGTTCTGTTACTTCTGCGGCGCTTTCTCACTCTCCG
CGCGACTCCGGCCTACCTTTCAATCCCCGTCTTCCTTGCACTCGCGCTTC
CGGCCAGTGTAGTTCTTCTGGTCCCCATTGACCTAGCATCAAGCTCACGC
GATGGCGGAGGCCCCACGGCTATTTGGCTACCCGACCGCCTAATTCTCGT
CTCCTGGCGCATTGCTTACTGGCTAATCTTTGTGCTGACATGGGCCATCC
TTCCTTTACTCGGAGAATACATTGATTCGGGTTACCGTGAGCCGAAGGGT
CGCATTCAATACTCCATTCGTTCCAATGCGCGGTATCAACTGATCGTGCT
GTGCTGTGCAACGGTCGGATTAATCTACATTTCGATCCAGAATGGCTTTG
AATTCACCTCGATTAAGACGCTAGTGATGGCTCTTGCATATGTTTGGGGT
CTGGTTCTGGCCATCTATCTGATGGGTCACGGACTTGTTTCCATTCCCCG
CACGCTCTTCCGTAACTCCAACGTCAGTGGTCGTCTGCGGAGGATCCAAG
CACATGCTCCGAAGCTGCACGACCGTTTGATGGACGCGATCAATGACCTG
GAAAGCCTGGAATCGCAAGTCGCCCAACTGCAGCGTCGCAAAACGGGCAC
CGCTCGCGATTTTCAAGAGTGGATTGATGAATTGGCAGAGACGTCGAACC
CGCCCGAGCTGCGTTCGGGGCTCTTAGAACAGGCGGATGGGCCCGGCACT
ATCCCTGCCGTCATTACTGAACGTTACCTTGCGGACTTGACCCGTCGTCT
TCAGCGCGCTCGGCATCAAAAGGCTCGCTTCGTCGACGAGTGGGATCGCT
TGGTCTTATCCGCAGCAGACATGCAGGCAATTATCAATTCGTCGGCTTCT
AAGAAGCTCGAGTTTATTCACTCCCCCCATCGATCATCTTGGCTCCCGAG
CCTTAACTTTCTGAGTCCATACATGCGATACCATCTCTATGTGCATGTTA
TTCCAAACGTGCGACTTGGACTAGGCGCGGTTTTCTCGGCGGCCTCCGTG
TGCGTTGTCTGGTCGGAGTTGGTCAAGTCCTTGGCGCCTCGGCTATCCGT
CGTGACGCTTTCTGTGGTTTCCTACCACAAGGAACCGGCGCCGGTCGACT
TTGGGCGCCAATTGATTGCCTCTGCTTGGCTGCTGTACATGTGCTCGGCA
GCATTGGTGGGTGTCAACGACGCCAAAGTGTGGGGCAACCGTGCTTTGGT
CCGCCGAAACACGTACGGGGAGAGTGCCTGTTGGTATGCGGGGCTAGTGG
CCAGACTGACCGTTCCCATCGCATACAACTTCTTGACCTTTTTGCCTGCG
ACCGTCCGGCAAAGCACCACTTTCTACAAGTTCTTGGGCCGGTTCATTGA
CCTTACCCCGCTCGGAAAGGGCTTTGATTACTTTTTCCCGGTCTTCATTC
TGGTTCCTATCGGTGCCACCCTTTTCAACCTCTACGGTCGCGTCCAGAAT
ATCTGCAGCTGGGGTCTTCTGGAAGAGGATGATGATGACCTGGAGAATAA
CCCCGGTGGCTACGGGCTAGGCGGATGGCGAGAGGGACGTGATCTTATCG
ACCGGGAGCTCAACGGCCTCGGTTCTTTGGGACTCTCCCCTCGTGGCGGT
CGGTCACCTCGCCCGTCCAGTCGCATTGACGATGACACGCCAGCCTTCTC
CTCCTCCCGCACCGCACTCCTAGAGAATTCTAGAACCCCTCGAGCCTCCA
GGGGAACACCAGCCACCACTCCTTTAATGGAGGATGAGGATGAAGATAAC
TTTTTCCAGTCCTTTGCTCACCGAGTAAGAAACACTTTCGAGACCGCCAG
CAAGCCCCAGTGGCTGCAGGGCGACTCCTTCCGTCTCCCCAGATGGATGG
GCAGCGAAAGCAATGAGGGCGATAGCGGACTGGCGAGGTGGTTTGGTGGT
CGACCAGCACCTGGCGGAGTCCGACTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011613-T1.utr5p1 | KJC3_011613-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011613-T1.utr3p1 | KJC3_011613-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006876 |
| DBxref | PFAM:PF04791 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1138856..1141408 + |
|
