|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1142170..1144577+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011614-T1 ID=KJC3_011614-T1|Name=KJC3_011614-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2408bp|location=Sequence derived from alignment at ch8:1142170..1144577+ (Aspergillus niger KJC3)
GGAACGTGTCGATCGGCCAGTACACAGTAGGTAGTTAACTTTCATTGTGA
CCTCTAGAAGTGTTTGCCACTCAGCAGCTGAGAGTTCGCTGCCTATAAGG
CTCCAGGGGAAAATAATAAAGATAAGCAAGTGTGATAGTTGGAACCTGAC
CATACTGGGGAAGGAATCCGCTCTCAGATTAGGCGGTGGATTTGTGCGAT
AAAATAATAATCAAACCCAATCTGACGTGCGCAGTGCATTACCACGTGTG
ATCGATCAAATGGGCTGGTAGCCTATGAACAGGGGATAATGTATGGTCTT
GTGTGCAGGTTGATTGTGTTTGGTCTGTTAGGTGGGAATTTAGTACTCTG
ATGTGGGAGATTTCTACAGTGATGCTTTAGTAGGATAGTATATAAGTATG
TCTGGGCGGGGAAAATATAAATTGAGTCACTGGCTTGGCAGATTACGCTT
TTCCCCTGTAAGCCTTGAAGACCACATGGTGTGCTCGTGTTGTTATTTAT
CGCGTGAGGAGGTAGAGAAAAAAGCAAAGAGAAAGGCACAGCGGCCTTGT
CAGGAGATCATAGTAGTAACTACTGGACAGTAAATAGGGACTGTCTGCCT
TGAGCACAAGTAGTAGTACTAACACCAAGTAAGTTGACTGCGCAACTCCG
ATGCGGGCAGCTGCTCCACCGCAGGATTTGCGGCTGCGGCAAAAAATAAC
GCCCTCTCCGCCTTATCTGCCTGGTCCGGAGCTAAAGTTGGCCATCTTCC
ATGACCTCAAACACGCCCTTCCCCTGTCGTCATCCCCCTTCATTGCCTCG
TGCCCTGGCCGTCAATCCATGAGCCAGCTGCTCTCGCACATTTCTCTGTC
CTCGCTGGGCGAGACGTGTGCATCCTACTTAGACCACGTCACCACCAACC
TTCCTCCGTCCTTGCACTCTCTCCACCATCAGCTCCTCGCCACGCTCTCA
TCAGCCAAAGACTCGACTCCCCTGCGCCTGCTTACGCCTTTGCCCGATCT
ACTAGCGGACCACACAGACGGCGCATACACCACCCCCGTCGCTTATACCC
TCCTCGTTTGTACAATTGTCGTTCTCGTCATGTCCTGGCGCTCTCCGTTC
GCCAACTTCTGGCGCCGCGGTTACACCAACGTCGATAACACTCCCCAAGT
CACCGACAACGACTACAGCTACATCACACAAGATGATATTGTCGACCCAC
CCGCAAACACGTATCGCAATCAATACGCAGGGGCAGAAGATACCGAGCCC
GACACTCTTATTCTGAAACACCGCAAGGAAAAGTACGATCTGCACTTCCC
GGCTTACGCTATCAACGACGGCGCCCTCAGCGTGGGTCAACTGAGACAGC
GGGCAGCGGAGGCGACGCGCACCCCTGATCCGAAGCGGATCAAACTCCTC
TACAAGGGGAAGTTGTTGGACAACGACTCGCTGCCGTGTCGGTCGGAGGG
TCTCAAACAACAGTCGGAAGTGCTGTGTGTGGTCTCCGGAGTGGAGCCGG
GGGAGAGCTCACCCAGTGAGTTGTCCGAGGCGGAGGCTGACAGGAACGCG
GATTCCGCCCGTCATGAGGGATCTGGTCGCAAGAAGTCGGGCAAGAACAA
GAAGCGCAATGGCAAGAATAAGAAGAAGGGTGGAAAGCAGGCCGACGGCT
CAAATACCCTCCCACCTCCTCCCGCCGCCGCCGCTGAACCTCCACGCCCG
TCCAACGGAACCGGCATGCCGCCCCCGGCGCCCAATTTGAAGCTGTTCAG
CAACCCGCTCGACCAAGTGAACGCACTGTCGTCGTATCTGCAGCGGGAGC
TCGTCCCTCTCTGCGAGGAATACATCACGAACACACCGGCGGATGCCAAG
TCACGCGAGTTCGAGTATAAAAAGCTGACCGAGACGATCCTGGCGCAGGT
TCTTTTGAATGCGGACAACATCAACCCCGATGGTGTGCAGGAAATCCGCG
ATGCGCGTCGGGCACTTGTCAAGTCAGCTCAGAACGCGCTCAATAGCCTG
GACCAGGTGAGCAGGTCTTGAGAGCTCGCGGCTGGTAATTATGCAACTTT
TGCTCTATTCAATTTTATTCTTTTTTTTTCTGTACATGAGATGGGAATAT
TCCAGGGAAAGATGATCATAATAATACAACGCAATAGAGAACAATAACCT
TCTGCTGTTTTATTTCATTTGCTTTGCTTGGGTCTGTCGGTGCCATCCAG
GGGTACTTATCTAGAACAGATAGATCCCCTCGTGCATCGAGACCGACCAC
GACTGAGTTCATGCTGCACATACATACAAATGATGCGGATTTACCTATGA
TTTGCATGGGACGGCGTCCGGATGATAAATGAATGGGCTGGTGGTTGGGG
TGGTTCCTTGCAGGATATTGATTGTGATAGTCCGTACAATATCACTACCT
TTCTACCA back to topCoding sequence (CDS) from alignment at ch8:1142170..1144577+ >KJC3_011614-T1 ID=KJC3_011614-T1|Name=KJC3_011614-T1|organism=Aspergillus niger KJC3|type=CDS|length=1371bp|location=Sequence derived from alignment at ch8:1142170..1144577+ (Aspergillus niger KJC3)
ATGCGGGCAGCTGCTCCACCGCAGGATTTGCGGCTGCGGCAAAAAATAAC
GCCCTCTCCGCCTTATCTGCCTGGTCCGGAGCTAAAGTTGGCCATCTTCC
ATGACCTCAAACACGCCCTTCCCCTGTCGTCATCCCCCTTCATTGCCTCG
TGCCCTGGCCGTCAATCCATGAGCCAGCTGCTCTCGCACATTTCTCTGTC
CTCGCTGGGCGAGACGTGTGCATCCTACTTAGACCACGTCACCACCAACC
TTCCTCCGTCCTTGCACTCTCTCCACCATCAGCTCCTCGCCACGCTCTCA
TCAGCCAAAGACTCGACTCCCCTGCGCCTGCTTACGCCTTTGCCCGATCT
ACTAGCGGACCACACAGACGGCGCATACACCACCCCCGTCGCTTATACCC
TCCTCGTTTGTACAATTGTCGTTCTCGTCATGTCCTGGCGCTCTCCGTTC
GCCAACTTCTGGCGCCGCGGTTACACCAACGTCGATAACACTCCCCAAGT
CACCGACAACGACTACAGCTACATCACACAAGATGATATTGTCGACCCAC
CCGCAAACACGTATCGCAATCAATACGCAGGGGCAGAAGATACCGAGCCC
GACACTCTTATTCTGAAACACCGCAAGGAAAAGTACGATCTGCACTTCCC
GGCTTACGCTATCAACGACGGCGCCCTCAGCGTGGGTCAACTGAGACAGC
GGGCAGCGGAGGCGACGCGCACCCCTGATCCGAAGCGGATCAAACTCCTC
TACAAGGGGAAGTTGTTGGACAACGACTCGCTGCCGTGTCGGTCGGAGGG
TCTCAAACAACAGTCGGAAGTGCTGTGTGTGGTCTCCGGAGTGGAGCCGG
GGGAGAGCTCACCCAGTGAGTTGTCCGAGGCGGAGGCTGACAGGAACGCG
GATTCCGCCCGTCATGAGGGATCTGGTCGCAAGAAGTCGGGCAAGAACAA
GAAGCGCAATGGCAAGAATAAGAAGAAGGGTGGAAAGCAGGCCGACGGCT
CAAATACCCTCCCACCTCCTCCCGCCGCCGCCGCTGAACCTCCACGCCCG
TCCAACGGAACCGGCATGCCGCCCCCGGCGCCCAATTTGAAGCTGTTCAG
CAACCCGCTCGACCAAGTGAACGCACTGTCGTCGTATCTGCAGCGGGAGC
TCGTCCCTCTCTGCGAGGAATACATCACGAACACACCGGCGGATGCCAAG
TCACGCGAGTTCGAGTATAAAAAGCTGACCGAGACGATCCTGGCGCAGGT
TCTTTTGAATGCGGACAACATCAACCCCGATGGTGTGCAGGAAATCCGCG
ATGCGCGTCGGGCACTTGTCAAGTCAGCTCAGAACGCGCTCAATAGCCTG
GACCAGGTGAGCAGGTCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051087 | chaperone binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011614-T1.utr5p1 | KJC3_011614-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011614-T1.utr3p1 | KJC3_011614-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR036533 |
| DBxref | InterPro:IPR003103 |
| DBxref | PFAM:PF02179 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1142170..1144577 + |
|
