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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1145877..1148901+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011615-T1 ID=KJC3_011615-T1|Name=KJC3_011615-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3025bp|location=Sequence derived from alignment at ch8:1145877..1148901+ (Aspergillus niger KJC3)
TCTCGGTCTTGGTCTCGACATTATTCTCTTTCTCTCTCTCTCCCGTTTCT
CCTCTCCTCTCCTCTCCCCTCCCATCTTCTAGTCCTTCTTCTTCCCTTCC
ATTCGGCTTCTTCTGGGTTTGGTCCCTTGGACAGTGCACTTCCTCTATTC
TTTTCTTCCTCTTCTTACCTACTTATTATCTATCTCTATTGAGCATCTCT
TTAATCAGCTTCCCCAGGTGTCAACGAATCGATCCTGACGCCACGGGTCC
AGCCACATCTTCTTGCAACCACTCCTTTTCCTTTGGGCTTTCTTCCCCTC
CTCTTCCTCCTCCGCCTCCTCTCTTTCTTCTCCTCCTCCTCCTAGTCGCT
TGACCCTCGACTCTTCTCTATTACCCCTCATCAAAACCCATCATCCTCTC
TCCTATCCATTTATCTTCTCCCCCCCCTTAATTATTCTATTTTCTTCCAA
TCCCCCGAACGGTTCTGATTCTCGGATCCCGACATTGCTAGCCGTCTGCC
ATCCGCCGTCGGCCTATAATAGTGCCCAGCCCGGAGTTACGTCCACGGTT
CCCATCCCGCCGGTCCCTGACTTCCTCTTCCACCCCCGGGGATTACATAT
TGCGCTGCAATTTTAAGGCTCCGGATTCTCCACTTCCCTGGCTGTTTACG
ATTTCCTCCTTTCGGAGCATCTCTCGTGTTCCGCTTCCACCCTCCCCCTT
TCCCACCGACTCGTGCCCTCTCAACCGTACTACATCTCCCAACCACCTAC
CCCTCACATCGTACATACAGTTGTTGGAGTCTCGGCTTAGGGGGTATTCG
AGACAAACGGTCCAGCACAGTTGGTGATTCTGGTCTGTGCGCTACTGGGA
TGGCCTGATCGGGGAACAAGACGGGAAGGGCAACAAAAAAAAATTATTCA
CCTAGTGACCAGACTCTCTTTAATTATCCTGCAAGCACGTTCGCCGCACC
ACGGGTTCCAGCTGGCCTGGCCTTGACCGAATCTTAATAATAGCTGTTGG
AATGGCGGGGACAGCTACCGCGACTTACACGACAGATGTTTGGACGTCAC
CCAGCGTAGATGGGGGTCAGTGGGAGTATGCTGTCCCGATTCGACAGGAT
GTAAGTGTGTTACAATCCCGACATACCTTTCTGCGGTGCTCTGGTGCAAT
TGCGCCGGTCGTTCAGGCATCTGCGGGCTAAAGCCGGACTGGCATGCTAA
CCTGCGATTCGGTAGAGTACTAAGCATCGCTCAAAATCACGGTCCTCCCA
CGATTCACACGCCAGATCCAGGGAGCGTACTTCCAAGGGCTCTCGCAGCT
CCTCACTGTCGCGACACGCCTATGCTCACGAGCACTTGACCTCCCGGGGC
CGCCCACAAGCTAGCCACAGCCGACGCGGAAGTGAGGCAGGCAGCTCACG
CTCAATCTACGGACACGATGTAGCCAGTCGCAGCGCCGGCAATGTGAAGG
ACTCGACGGATAGTCTTTATCGAAAGGGGTCGGTGAGACAAGACGAGCGG
AACGAGGGAATGGGGCTGTATATGGACGAGCTGGACCAGGACAATTGGAT
TCATCGCGACAAGCTGGCCAAAATTGAGAGTGAGGAGCTGCAGCAAGCCG
CTATTCTACTACAACGTCGGGCGGGTGAGGGCAACAAGACGCGCACAAAG
AACTATGACTTGTATGGAACGCCTGCCACCTCTCCGCCGACCGAGCAACT
GGAGCCATGGCCGAGTTTGCACGGCGATTCCCAGCTCCGAGAACATAGCG
GCTCTCCGACCTTCCCAGAAGAGGGTGAAGAGCGCGACAGATGGGATCCT
CGTCGACCGGAAGAGAACACGGCTAATGGAGCGGCTGGCTTCTATCGTAA
CCCCGGACTGCGCAAGAGCTCGTCGCGGATACCCATTCCCTCGGGTATTC
CTGTACCGATCTCTCCCAATCCCGAGAACGGCGGACGGGAATTCTCCAAA
CAGCGCAGCCGCGCAAATACCAACGGGGATGACGATGCTTTGTCCTTCGG
TATGCCCCGTCGGGCCAGTGAGCCAATGTCGGTGGACTCTGCCCAGAACA
TCACTCCGGCCGGGAGCCGGCCTGGCAGTCGTGGGAACACCCTGCAAAAT
GCGGCGGGGAGAAAGACCACCAAGGGTGGTGCTACCAATCGCAAGACGTC
GGCTCCTCCGTCAACTACACGAAAGGCAACCCCGAGAAGCCGGGCACCGT
CGAGCACGTTGCGGGCCACTAAAGCCGCAGAAAATCGTCCCATTAACCGG
CCGGAAGGCGACCCTCCATGGCTGGCGACGATGTACAAGCCCGATCCACG
TCTTCCGCCTGACCAGCAGATTCTTCCCACGCATGCCCGACGCATGCAGC
AGGAGCAGTGGGAGAAGGAAGGCAAGACGCCTACCACGTATGATCGGGAG
TTTGCTCCGCTAGCCATTGGGCCAGACGGGCCGAAGCCCACAGAGAAGCC
GGCACCGAAGGAAGAGGAGCCGGAGCCGATCGAACAGAACGAAAAGGAGG
AGAAGGAAGAAGTGCAAGTGCCACAGAAGACCCCGAACTTGGAGACACCG
TCCAAGGAGTCAGGACGGCCGAACTCAGGCACCGGCTACAGCACGATGCC
GCGGGTACAGGAACCACCACAGGCGGCACTGCAGCCGAAATGGAGCCCGC
CAGTGGTGACCGCGCAGGAACCGCCGCCGAAGGAGAAGGGCTGCGGATGC
TGCATCGTGATGTAGGGGGAGGACGCATTCGTTTTGAGTGGCATATGTCC
GTCATTTAAGATACCTATTTCCTGCATTGTGGATTTGTTTTTTCAGCGAG
CTGGGTGGTGTTTGATCTGACTAGGATTTTAATAGCTATCCACCTTCTTA
CTTCTTGTCATTCCTTGGAGAGATTTTTATTCTCATTTGATTCCCTATTG
CTGTTGATTCCTGCATTGAGCGGTCATTACGACATCACGCGTCTTTCCTT
GAACAAGCATTGTTTTCTTTGTGCATATCGTTATAGACAAATAGTTCACC
ACAATGACTTTATATATCCCACTAC back to topCoding sequence (CDS) from alignment at ch8:1145877..1148901+ >KJC3_011615-T1 ID=KJC3_011615-T1|Name=KJC3_011615-T1|organism=Aspergillus niger KJC3|type=CDS|length=3198bp|location=Sequence derived from alignment at ch8:1145877..1148901+ (Aspergillus niger KJC3)
ATGGCGGGGACAGCTACCGCGACTTACACGACAGATGTTTGGACGTCACC
CAGCGTAGATGGGGGTCAGTGGGAGTATGCTGTCCCGATTCGACAGGATA
GTACTAAGCATCGCTCAAAATCACGGTCCTCCCACGATTCACACGCCAGA
TCCAGGGAGCGTACTTCCAAGGGCTCTCGCAGCTCCTCACTGTCGCGACA
CGCCTATGCTCACGAGCACTTGACCTCCCGGGGCCGCCCACAAGCTAGCC
ACAGCCGACGCGGAAGTGAGGCAGGCAGCTCACGCTCAATCTACGGACAC
GATGTAGCCAGTCGCAGCGCCGGCAATGTGAAGGACTCGACGGATAGTCT
TTATCGAAAGGGGTCGGTGAGACAAGACGAGCGGAACGAGGGAATGGGGC
TGTATATGGACGAGCTGGACCAGGACAATTGGATTCATCGCGACAAGCTG
GCCAAAATTGAGAGTGAGGAGCTGCAGCAAGCCGCTATTCTACTACAACG
TCGGGCGGGTGAGGGCAACAAGACGCGCACAAAGAACTATGACTTGTATG
GAACGCCTGCCACCTCTCCGCCGACCGAGCAACTGGAGCCATGGCCGAGT
TTGCACGGCGATTCCCAGCTCCGAGAACATAGCGGCTCTCCGACCTTCCC
AGAAGAGGGTGAAGAGCGCGACAGATGGGATCCTCGTCGACCGGAAGAGA
ACACGGCTAATGGAGCGGCTGGCTTCTATCGTAACCCCGGACTGCGCAAG
AGCTCGTCGCGGATACCCATTCCCTCGGGTATTCCTGTACCGATCTCTCC
CAATCCCGAGAACGGCGGACGGGAATTCTCCAAACAGCGCAGCCGCGCAA
ATACCAACGGGGATGACGATGCTTTGTCCTTCGGTATGCCCCGTCGGGCC
AGTGAGCCAATGTCGGTGGACTCTGCCCAGAACATCACTCCGGCCGGGAG
CCGGCCTGGCAGTCGTGGGAACACCCTGCAAAATGCGGCGGGGAGAAAGA
CCACCAAGGGTGGTGCTACCAATCGCAAGACGTCGGCTCCTCCGTCAACT
ACACGAAAGGCAACCCCGAGAAGCCGGGCACCGTCGAGCACGTTGCGGGC
CACTAAAGCCGCAGAAAATCGTCCCATTAACCGGCCGGAAGGCGACCCTC
CATGGCTGGCGACGATGTACAAGCCCGATCCACGTCTTCCGCCTGACCAG
CAGATTCTTCCCACGCATGCCCGACGCATGCAGCAGGAGCAGTGGGAGAA
GGAAGGCAAGACGCCTACCACGTATGATCGGGAGTTTGCTCCGCTAGCCA
TTGGGCCAGACGGGCCGAAGCCCACAGAGAAGCCGGCACCGAAGGAAGAG
GAGCCGGAGCCGATCGAACAGAACGAAAAGGAGGAGAAGGAAGAAGTGCA
AGTGCCACAGAAGACCCCGAACTTGGAGACACCGTCCAAGGAGTCAGGAC
GGCCGAACTCAGGCACCGGCTACAGCACGATGCCGCGGGTACAGGAACCA
CCACAGGCGGCACTGCAGCCGAAATGGAGCCCGCCAGTGGTGACCGCGCA
GGAACCGCCGCCGAAGGAGAAGGGCTGCGGATGCTGCATCGTGATGTAGA
TGGCGGGGACAGCTACCGCGACTTACACGACAGATGTTTGGACGTCACCC
AGCGTAGATGGGGGTCAGTGGGAGTATGCTGTCCCGATTCGACAGGATAG
TACTAAGCATCGCTCAAAATCACGGTCCTCCCACGATTCACACGCCAGAT
CCAGGGAGCGTACTTCCAAGGGCTCTCGCAGCTCCTCACTGTCGCGACAC
GCCTATGCTCACGAGCACTTGACCTCCCGGGGCCGCCCACAAGCTAGCCA
CAGCCGACGCGGAAGTGAGGCAGGCAGCTCACGCTCAATCTACGGACACG
ATGTAGCCAGTCGCAGCGCCGGCAATGTGAAGGACTCGACGGATAGTCTT
TATCGAAAGGGGTCGGTGAGACAAGACGAGCGGAACGAGGGAATGGGGCT
GTATATGGACGAGCTGGACCAGGACAATTGGATTCATCGCGACAAGCTGG
CCAAAATTGAGAGTGAGGAGCTGCAGCAAGCCGCTATTCTACTACAACGT
CGGGCGGGTGAGGGCAACAAGACGCGCACAAAGAACTATGACTTGTATGG
AACGCCTGCCACCTCTCCGCCGACCGAGCAACTGGAGCCATGGCCGAGTT
TGCACGGCGATTCCCAGCTCCGAGAACATAGCGGCTCTCCGACCTTCCCA
GAAGAGGGTGAAGAGCGCGACAGATGGGATCCTCGTCGACCGGAAGAGAA
CACGGCTAATGGAGCGGCTGGCTTCTATCGTAACCCCGGACTGCGCAAGA
GCTCGTCGCGGATACCCATTCCCTCGGGTATTCCTGTACCGATCTCTCCC
AATCCCGAGAACGGCGGACGGGAATTCTCCAAACAGCGCAGCCGCGCAAA
TACCAACGGGGATGACGATGCTTTGTCCTTCGGTATGCCCCGTCGGGCCA
GTGAGCCAATGTCGGTGGACTCTGCCCAGAACATCACTCCGGCCGGGAGC
CGGCCTGGCAGTCGTGGGAACACCCTGCAAAATGCGGCGGGGAGAAAGAC
CACCAAGGGTGGTGCTACCAATCGCAAGACGTCGGCTCCTCCGTCAACTA
CACGAAAGGCAACCCCGAGAAGCCGGGCACCGTCGAGCACGTTGCGGGCC
ACTAAAGCCGCAGAAAATCGTCCCATTAACCGGCCGGAAGGCGACCCTCC
ATGGCTGGCGACGATGTACAAGCCCGATCCACGTCTTCCGCCTGACCAGC
AGATTCTTCCCACGCATGCCCGACGCATGCAGCAGGAGCAGTGGGAGAAG
GAAGGCAAGACGCCTACCACGTATGATCGGGAGTTTGCTCCGCTAGCCAT
TGGGCCAGACGGGCCGAAGCCCACAGAGAAGCCGGCACCGAAGGAAGAGG
AGCCGGAGCCGATCGAACAGAACGAAAAGGAGGAGAAGGAAGAAGTGCAA
GTGCCACAGAAGACCCCGAACTTGGAGACACCGTCCAAGGAGTCAGGACG
GCCGAACTCAGGCACCGGCTACAGCACGATGCCGCGGGTACAGGAACCAC
CACAGGCGGCACTGCAGCCGAAATGGAGCCCGCCAGTGGTGACCGCGCAG
GAACCGCCGCCGAAGGAGAAGGGCTGCGGATGCTGCATCGTGATGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011615-T1.utr5p1 | KJC3_011615-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011615-T1.utr3p1 | KJC3_011615-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1145877..1148901 + |
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