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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1154253..1155775+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011619-T1 ID=KJC3_011619-T1|Name=KJC3_011619-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1523bp|location=Sequence derived from alignment at ch8:1154253..1155775+ (Aspergillus niger KJC3)
ATGCAACTAAGAGCTTCGGTTTTGCTCTCTTTCCTGGGGCTGGCCTCCGT
TGGCCATGCAGGTAATGTGGAAAACAACCACAATGTCTGCACCGTCCGAG
CAAACGGGGGACACCAAGATGACGTCCCCAATATTATGGCGGCGTTCAAA
GAGTGTGGCAATGGAGGTACCATTATTTTCCCCGAAGACCAATCGTACTG
GATTGCGACGAGACTGCATCCCACATTGAAGGACGTCGCAATCGAATGGC
GGGGGAAGTGGACAGTAAGACTCCCTCACTATCCATCTCGTGACTTGTGA
AACGCTGATTCGGTCCAGTTTTCCGACAACCTCACCTACTGGCGTAACAA
CTCCTACCCCATTGCGTTCCAGAACCATCATGCCGGCTTCATTATTAGCG
GCGACAACATCACCATCAATGGCTATGGCACCGGCGGCATTGATGGCAAT
GGCAATACTTGGTACACAGCCGAGAAGGGCGACACGCAGCCGGGGCGTCC
GATGCCATTTGTCTTTTGGAACGTGTCTGAGGTTATTGTTGACAGTTTCT
ACGTCAAGGATCCGCCCCTCTGGAGTGTCAACATCATGAACGGGACTAAC
ATGCGTTTCAACAATATCTACTGCAACGCCACGGCTGTAGATGCCCCCTG
GGGCGATAACTGGGTGCAGAATACGGATGGTTTCGGTATGATTCTTTTTG
TCCGCGCTCTAGTGGAATGGGTTAGGTTCTGACTAGCACTCGTATCCAGA
TACCATGGACGCTACCAACATCCAGCTCACCAACTTCGTCTACCAAGGCG
GAGATGACTGCATCGCTATCAAGCCCCGCTCCTACAACATCGACATCCAG
AATGTTACCTGCCGTGGAGGCAACGGCATTGCCATTGGCAGCTTGGGTCA
ATATTTGGAAGATAGCAGTGTTGCTAACATTCGCGTGGACAAGGTCAATG
TACGTGATTGTTTCCCGGCCACCATCGCCATTAGTATTAACCGTAATCCA
GATCATCCGCTACAACGAAGACATGCACAACAGCGCCTACCTCAAGACCT
GGGTCGGAGCTCTCGTCCCCCAAAGTTCCTACGAAAGCGCCGGCGTACCT
CGTGGCGATGGCTGGGGCAGCATCCGTAACGTCCTATTTTCAAACTTCAA
TGTACAAGGCGCAAGCGCTGGCCCTTCCATCAGTCAGGACAGTGGAGACA
ACGGTTCCTATGCGGGTACAAGCAAGATGTCTATTTCAAATGTTGCGTTT
GTCAATTTCACGGGATGGGTGGATACTGAGAAGTCTGTGGTCTCGACGGT
CTCCTGCTCAGAGGTACATCCGTGCTACAATATCGACTATGACAATGTGG
TGTTGTATCCAGGGAAGAATGCCACAACAGCTGGGACAGGGTCTTGTAAA
TATACAGCTGATGGAGGAGTGCATGGGTTGAGTGGGTGTTGATTTGTGGA
TCGCTAAGGAAGCGATTTGGTTGATATGTGTATATATGACTGCAAGTAAG
AAGGATCAATGGGTGACAGTAAT back to topCoding sequence (CDS) from alignment at ch8:1154253..1155775+ >KJC3_011619-T1 ID=KJC3_011619-T1|Name=KJC3_011619-T1|organism=Aspergillus niger KJC3|type=CDS|length=5088bp|location=Sequence derived from alignment at ch8:1154253..1155775+ (Aspergillus niger KJC3)
ATGCAACTAAGAGCTTCGGTTTTGCTCTCTTTCCTGGGGCTGGCCTCCGT
TGGCCATGCAGGTAATGTGGAAAACAACCACAATGTCTGCACCGTCCGAG
CAAACGGGGGACACCAAGATGACGTCCCCAATATTATGGCGGCGTTCAAA
GAGTGTGGCAATGGAGGTACCATTATTTTCCCCGAAGACCAATCGTACTG
GATTGCGACGAGACTGCATCCCACATTGAAGGACGTCGCAATCGAATGGC
GGGGGAAGTGGACATTTTCCGACAACCTCACCTACTGGCGTAACAACTCC
TACCCCATTGCGTTCCAGAACCATCATGCCGGCTTCATTATTAGCGGCGA
CAACATCACCATCAATGGCTATGGCACCGGCGGCATTGATGGCAATGGCA
ATACTTGGTACACAGCCGAGAAGGGCGACACGCAGCCGGGGCGTCCGATG
CCATTTGTCTTTTGGAACGTGTCTGAGGTTATTGTTGACAGTTTCTACGT
CAAGGATCCGCCCCTCTGGAGTGTCAACATCATGAACGGGACTAACATGC
GTTTCAACAATATCTACTGCAACGCCACGGCTGTAGATGCCCCCTGGGGC
GATAACTGGGTGCAGAATACGGATGGTTTCGATACCATGGACGCTACCAA
CATCCAGCTCACCAACTTCGTCTACCAAGGCGGAGATGACTGCATCGCTA
TCAAGCCCCGCTCCTACAACATCGACATCCAGAATGTTACCTGCCGTGGA
GGCAACGGCATTGCCATTGGCAGCTTGGGTCAATATTTGGAAGATAGCAG
TGTTGCTAACATTCGCGTGGACAAGGTCAATATCATCCGCTACAACGAAG
ACATGCACAACAGCGCCTACCTCAAGACCTGGGTCGGAGCTCTCGTCCCC
CAAAGTTCCTACGAAAGCGCCGGCGTACCTCGTGGCGATGGCTGGGGCAG
CATCCGTAACGTCCTATTTTCAAACTTCAATGTACAAGGCGCAAGCGCTG
GCCCTTCCATCAGTCAGGACAGTGGAGACAACGGTTCCTATGCGGGTACA
AGCAAGATGTCTATTTCAAATGTTGCGTTTGTCAATTTCACGGGATGGGT
GGATACTGAGAAGTCTGTGGTCTCGACGGTCTCCTGCTCAGAGGTACATC
CGTGCTACAATATCGACTATGACAATGTGGTGTTGTATCCAGGGAAGAAT
GCCACAACAGCTGGGACAGGGTCTTGTAAATATACAGCTGATGGAGGAGT
GCATGGGTTGAGTGGGTGTTGAATGCAACTAAGAGCTTCGGTTTTGCTCT
CTTTCCTGGGGCTGGCCTCCGTTGGCCATGCAGGTAATGTGGAAAACAAC
CACAATGTCTGCACCGTCCGAGCAAACGGGGGACACCAAGATGACGTCCC
CAATATTATGGCGGCGTTCAAAGAGTGTGGCAATGGAGGTACCATTATTT
TCCCCGAAGACCAATCGTACTGGATTGCGACGAGACTGCATCCCACATTG
AAGGACGTCGCAATCGAATGGCGGGGGAAGTGGACATTTTCCGACAACCT
CACCTACTGGCGTAACAACTCCTACCCCATTGCGTTCCAGAACCATCATG
CCGGCTTCATTATTAGCGGCGACAACATCACCATCAATGGCTATGGCACC
GGCGGCATTGATGGCAATGGCAATACTTGGTACACAGCCGAGAAGGGCGA
CACGCAGCCGGGGCGTCCGATGCCATTTGTCTTTTGGAACGTGTCTGAGG
TTATTGTTGACAGTTTCTACGTCAAGGATCCGCCCCTCTGGAGTGTCAAC
ATCATGAACGGGACTAACATGCGTTTCAACAATATCTACTGCAACGCCAC
GGCTGTAGATGCCCCCTGGGGCGATAACTGGGTGCAGAATACGGATGGTT
TCGATACCATGGACGCTACCAACATCCAGCTCACCAACTTCGTCTACCAA
GGCGGAGATGACTGCATCGCTATCAAGCCCCGCTCCTACAACATCGACAT
CCAGAATGTTACCTGCCGTGGAGGCAACGGCATTGCCATTGGCAGCTTGG
GTCAATATTTGGAAGATAGCAGTGTTGCTAACATTCGCGTGGACAAGGTC
AATATCATCCGCTACAACGAAGACATGCACAACAGCGCCTACCTCAAGAC
CTGGGTCGGAGCTCTCGTCCCCCAAAGTTCCTACGAAAGCGCCGGCGTAC
CTCGTGGCGATGGCTGGGGCAGCATCCGTAACGTCCTATTTTCAAACTTC
AATGTACAAGGCGCAAGCGCTGGCCCTTCCATCAGTCAGGACAGTGGAGA
CAACGGTTCCTATGCGGGTACAAGCAAGATGTCTATTTCAAATGTTGCGT
TTGTCAATTTCACGGGATGGGTGGATACTGAGAAGTCTGTGGTCTCGACG
GTCTCCTGCTCAGAGGTACATCCGTGCTACAATATCGACTATGACAATGT
GGTGTTGTATCCAGGGAAGAATGCCACAACAGCTGGGACAGGGTCTTGTA
AATATACAGCTGATGGAGGAGTGCATGGGTTGAGTGGGTGTTGAATGCAA
CTAAGAGCTTCGGTTTTGCTCTCTTTCCTGGGGCTGGCCTCCGTTGGCCA
TGCAGGTAATGTGGAAAACAACCACAATGTCTGCACCGTCCGAGCAAACG
GGGGACACCAAGATGACGTCCCCAATATTATGGCGGCGTTCAAAGAGTGT
GGCAATGGAGGTACCATTATTTTCCCCGAAGACCAATCGTACTGGATTGC
GACGAGACTGCATCCCACATTGAAGGACGTCGCAATCGAATGGCGGGGGA
AGTGGACATTTTCCGACAACCTCACCTACTGGCGTAACAACTCCTACCCC
ATTGCGTTCCAGAACCATCATGCCGGCTTCATTATTAGCGGCGACAACAT
CACCATCAATGGCTATGGCACCGGCGGCATTGATGGCAATGGCAATACTT
GGTACACAGCCGAGAAGGGCGACACGCAGCCGGGGCGTCCGATGCCATTT
GTCTTTTGGAACGTGTCTGAGGTTATTGTTGACAGTTTCTACGTCAAGGA
TCCGCCCCTCTGGAGTGTCAACATCATGAACGGGACTAACATGCGTTTCA
ACAATATCTACTGCAACGCCACGGCTGTAGATGCCCCCTGGGGCGATAAC
TGGGTGCAGAATACGGATGGTTTCGATACCATGGACGCTACCAACATCCA
GCTCACCAACTTCGTCTACCAAGGCGGAGATGACTGCATCGCTATCAAGC
CCCGCTCCTACAACATCGACATCCAGAATGTTACCTGCCGTGGAGGCAAC
GGCATTGCCATTGGCAGCTTGGGTCAATATTTGGAAGATAGCAGTGTTGC
TAACATTCGCGTGGACAAGGTCAATATCATCCGCTACAACGAAGACATGC
ACAACAGCGCCTACCTCAAGACCTGGGTCGGAGCTCTCGTCCCCCAAAGT
TCCTACGAAAGCGCCGGCGTACCTCGTGGCGATGGCTGGGGCAGCATCCG
TAACGTCCTATTTTCAAACTTCAATGTACAAGGCGCAAGCGCTGGCCCTT
CCATCAGTCAGGACAGTGGAGACAACGGTTCCTATGCGGGTACAAGCAAG
ATGTCTATTTCAAATGTTGCGTTTGTCAATTTCACGGGATGGGTGGATAC
TGAGAAGTCTGTGGTCTCGACGGTCTCCTGCTCAGAGGTACATCCGTGCT
ACAATATCGACTATGACAATGTGGTGTTGTATCCAGGGAAGAATGCCACA
ACAGCTGGGACAGGGTCTTGTAAATATACAGCTGATGGAGGAGTGCATGG
GTTGAGTGGGTGTTGAATGCAACTAAGAGCTTCGGTTTTGCTCTCTTTCC
TGGGGCTGGCCTCCGTTGGCCATGCAGGTAATGTGGAAAACAACCACAAT
GTCTGCACCGTCCGAGCAAACGGGGGACACCAAGATGACGTCCCCAATAT
TATGGCGGCGTTCAAAGAGTGTGGCAATGGAGGTACCATTATTTTCCCCG
AAGACCAATCGTACTGGATTGCGACGAGACTGCATCCCACATTGAAGGAC
GTCGCAATCGAATGGCGGGGGAAGTGGACATTTTCCGACAACCTCACCTA
CTGGCGTAACAACTCCTACCCCATTGCGTTCCAGAACCATCATGCCGGCT
TCATTATTAGCGGCGACAACATCACCATCAATGGCTATGGCACCGGCGGC
ATTGATGGCAATGGCAATACTTGGTACACAGCCGAGAAGGGCGACACGCA
GCCGGGGCGTCCGATGCCATTTGTCTTTTGGAACGTGTCTGAGGTTATTG
TTGACAGTTTCTACGTCAAGGATCCGCCCCTCTGGAGTGTCAACATCATG
AACGGGACTAACATGCGTTTCAACAATATCTACTGCAACGCCACGGCTGT
AGATGCCCCCTGGGGCGATAACTGGGTGCAGAATACGGATGGTTTCGATA
CCATGGACGCTACCAACATCCAGCTCACCAACTTCGTCTACCAAGGCGGA
GATGACTGCATCGCTATCAAGCCCCGCTCCTACAACATCGACATCCAGAA
TGTTACCTGCCGTGGAGGCAACGGCATTGCCATTGGCAGCTTGGGTCAAT
ATTTGGAAGATAGCAGTGTTGCTAACATTCGCGTGGACAAGGTCAATATC
ATCCGCTACAACGAAGACATGCACAACAGCGCCTACCTCAAGACCTGGGT
CGGAGCTCTCGTCCCCCAAAGTTCCTACGAAAGCGCCGGCGTACCTCGTG
GCGATGGCTGGGGCAGCATCCGTAACGTCCTATTTTCAAACTTCAATGTA
CAAGGCGCAAGCGCTGGCCCTTCCATCAGTCAGGACAGTGGAGACAACGG
TTCCTATGCGGGTACAAGCAAGATGTCTATTTCAAATGTTGCGTTTGTCA
ATTTCACGGGATGGGTGGATACTGAGAAGTCTGTGGTCTCGACGGTCTCC
TGCTCAGAGGTACATCCGTGCTACAATATCGACTATGACAATGTGGTGTT
GTATCCAGGGAAGAATGCCACAACAGCTGGGACAGGGTCTTGTAAATATA
CAGCTGATGGAGGAGTGCATGGGTTGAGTGGGTGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011619-T1.utr3p1 | KJC3_011619-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR000743 |
| DBxref | PFAM:PF00295 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1154253..1155775 + |
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