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KJC3_011622-T1, KJC3_011622-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011622-T1
Unique NameKJC3_011622-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1161350..1163252-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011622-T1 ID=KJC3_011622-T1|Name=KJC3_011622-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1903bp|location=Sequence derived from alignment at ch8:1161350..1163252- (Aspergillus niger KJC3)
TTTCCTCCCTCGTCCGCTTCAGTACGTATATCTTCCCCCCCTCTCTCTTC
CTTCTCACTCTTCTCTCCTTCTTTCTTGATTCATCCTCTCTCTAACTGAC
TTCTTTGCTCAGCACCTCTACGCGTTCTGGCCGTAGTATCTGAGCAATTT
CTCTACAGACTTTTTCTATCTAATTCCAAAAAAGAACTTCGAGTTCATTC
ACAACCGTCATCATGGGGTGAGTCAAGACAACGATCATCATCTGACAAAG
GAAGGACATGGGCTAACGGATATCTTCTACAACAGTAAGGAGGACAAGAC
TCACATCAACATCGTCGTTATCGGCCACGTCGATTCCGGCAAGTCCACCA
CCACTGGTCACCTGATCTACAAGTGCGGTGGTATCGACCAGCGTACCATC
GAGAAGTTCGAGAAGGTAAGGAGGATTATACATCTGAAAGAAGAATATCA
AGACATGGTGCTAACAACATCCTACAGGAAGCCGCCGAGCTCGGTAAGGG
TTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGTCCGAGCGTGAGC
GTGGTATCACCATCGACATTGCCCTCTGGAAGTTCCAGACTGGCAAGTAT
GAGGTCACCGTCATTGGTAAGTACTATCACAGAGTTCTCTCGATCAAATT
AACATACTAACGTACATGATAGACGCCCCCGGTCACCGTGACTTCATCAA
GAACATGATCACTGGTACCTCCCAGGCTGACTGCGCTATCCTCATCATTG
CCTCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGCCAGACT
CGTGAGCACGCTCTGCTTGCTTTCACCCTCGGTGTCCGTCAGCTCATTGT
TGCCCTCAACAAGATGGACACCTGCAAGTGGTCCGAGGACCGTTACAACG
AAATCGTTAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTACAACCCC
AAGGGTGTTCCTTTCGTCCCCATCTCCGGTTTCAACGGTGACAACATGCT
CGAGCCCTCCCCCAACTGCCCCTGGTACAAGGGTTGGGAGAAGGAGACCA
AGGCCGGCAAGGTCACCGGTAAGACCCTCCTCGAGGCCATCGACGCCATC
GAGCCCCCCGTCCGTCCCTCCAACAAGCCCCTCCGTCTTCCCCTCCAGGA
TGTCTACAAGATCTCCGGTATTGGAACTGTTCCCGTCGGTCGTGTCGAGA
CCGGTATCATTGCCCCTGGTATGGTCGTGACCTTCGCTCCCGCCAACGTC
ACCACTGAAGTCAAGTCCGTTGAGATGCACCACCAGCAGCTCAAGGAGGG
TGTCCCCGGTGACAACGTTGGTTTCAACGTCAAGAACGTTTCCGTCAAGG
AGGTTCGCCGTGGTAACGTTGCCGGTGACTCCAAGAACGACCCCCCTCTT
GGCTGTGAGAGCTTCACCGCCCAGGTCATCGTCCTCAACCACCCCGGTCA
GGTCGGCGCTGGTTACGCTCCCGTCCTGGACTGCCACACTGCTCACATTG
CTTGCAAGTTCGCTGAGCTCCTTGAGAAGATTGACCGCCGTACCGGAAAG
TCTGTTGAATCTTCCCCCAAGTTCATCAAGTCCGGTGACGCTGCCATCGT
CAAGATGATTCCCTCCAAGCCCATGTGTGTTGAGGCTTTCACTGACTACC
CCCCTCTTGGTCGTTTCGCTGTCCGCGACATGCGCCAGACTGTTGCTGTC
GGTGTTATCAAGGCTGTTGAGAAGAAGGAGGGTGGTTCCGGTAAGGTTAC
CAAGGCCGCCCAGAAGGCCGGTAAGAAATAAGCTGGTGCAGGGTGAAAAT
GGCATGATGAACCTTTGATGATCAAACAAAACAATGGAATTACGGAATTA
GACTTTGAGTTTATGTAGTTGATCCTACAGGACTTGAATTACGACTCGTT
TCG
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Coding sequence (CDS) from alignment at ch8:1161350..1163252-

>KJC3_011622-T1 ID=KJC3_011622-T1|Name=KJC3_011622-T1|organism=Aspergillus niger KJC3|type=CDS|length=5532bp|location=Sequence derived from alignment at ch8:1161350..1163252- (Aspergillus niger KJC3)
ACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCC
CAGGCTGACTGCGCTATCCTCATCATTGCCTCCGGTACTGGTGAGTTCGA
GGCTGGTATCTCCAAGGATGGCCAGACTCGTGAGCACGCTCTGCTTGCTT
TCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACC
TGCAAGTGGTCCGAGGACCGTTACAACGAAATCGTTAAGGAGACCTCCAA
CTTCATCAAGAAGGTCGGCTACAACCCCAAGGGTGTTCCTTTCGTCCCCA
TCTCCGGTTTCAACGGTGACAACATGCTCGAGCCCTCCCCCAACTGCCCC
TGGTACAAGGGTTGGGAGAAGGAGACCAAGGCCGGCAAGGTCACCGGTAA
GACCCTCCTCGAGGCCATCGACGCCATCGAGCCCCCCGTCCGTCCCTCCA
ACAAGCCCCTCCGTCTTCCCCTCCAGGATGTCTACAAGATCTCCGGTATT
GGAACTGTTCCCGTCGGTCGTGTCGAGACCGGTATCATTGCCCCTGGTAT
GGTCGTGACCTTCGCTCCCGCCAACGTCACCACTGAAGTCAAGTCCGTTG
AGATGCACCACCAGCAGCTCAAGGAGGGTGTCCCCGGTGACAACGTTGGT
TTCAACGTCAAGAACGTTTCCGTCAAGGAGGTTCGCCGTGGTAACGTTGC
CGGTGACTCCAAGAACGACCCCCCTCTTGGCTGTGAGAGCTTCACCGCCC
AGGTCATCGTCCTCAACCACCCCGGTCAGGTCGGCGCTGGTTACGCTCCC
GTCCTGGACTGCCACACTGCTCACATTGCTTGCAAGTTCGCTGAGCTCCT
TGAGAAGATTGACCGCCGTACCGGAAAGTCTGTTGAATCTTCCCCCAAGT
TCATCAAGTCCGGTGACGCTGCCATCGTCAAGATGATTCCCTCCAAGCCC
ATGTGTGTTGAGGCTTTCACTGACTACCCCCCTCTTGGTCGTTTCGCTGT
CCGCGACATGCGCCAGACTGTTGCTGTCGGTGTTATCAAGGCTGTTGAGA
AGAAGGAGGGTGGTTCCGGTAAGGTTACCAAGGCCGCCCAGAAGGCCGGT
AAGAAATAAGAAGCCGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCTTG
GGTTCTTGACAAGCTCAAGTCCGAGCGTGAGCGTGGTATCACCATCGACA
TTGCCCTCTGGAAGTTCCAGACTGGCAAGTATGAGGTCACCGTCATTGTA
AGGAGGACAAGACTCACATCAACATCGTCGTTATCGGCCACGTCGATTCC
GGCAAGTCCACCACCACTGGTCACCTGATCTACAAGTGCGGTGGTATCGA
CCAGCGTACCATCGAGAAGTTCGAGAAGATGGGACGCCCCCGGTCACCGT
GACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCTGACTGCGCTAT
CCTCATCATTGCCTCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGG
ATGGCCAGACTCGTGAGCACGCTCTGCTTGCTTTCACCCTCGGTGTCCGT
CAGCTCATTGTTGCCCTCAACAAGATGGACACCTGCAAGTGGTCCGAGGA
CCGTTACAACGAAATCGTTAAGGAGACCTCCAACTTCATCAAGAAGGTCG
GCTACAACCCCAAGGGTGTTCCTTTCGTCCCCATCTCCGGTTTCAACGGT
GACAACATGCTCGAGCCCTCCCCCAACTGCCCCTGGTACAAGGGTTGGGA
GAAGGAGACCAAGGCCGGCAAGGTCACCGGTAAGACCCTCCTCGAGGCCA
TCGACGCCATCGAGCCCCCCGTCCGTCCCTCCAACAAGCCCCTCCGTCTT
CCCCTCCAGGATGTCTACAAGATCTCCGGTATTGGAACTGTTCCCGTCGG
TCGTGTCGAGACCGGTATCATTGCCCCTGGTATGGTCGTGACCTTCGCTC
CCGCCAACGTCACCACTGAAGTCAAGTCCGTTGAGATGCACCACCAGCAG
CTCAAGGAGGGTGTCCCCGGTGACAACGTTGGTTTCAACGTCAAGAACGT
TTCCGTCAAGGAGGTTCGCCGTGGTAACGTTGCCGGTGACTCCAAGAACG
ACCCCCCTCTTGGCTGTGAGAGCTTCACCGCCCAGGTCATCGTCCTCAAC
CACCCCGGTCAGGTCGGCGCTGGTTACGCTCCCGTCCTGGACTGCCACAC
TGCTCACATTGCTTGCAAGTTCGCTGAGCTCCTTGAGAAGATTGACCGCC
GTACCGGAAAGTCTGTTGAATCTTCCCCCAAGTTCATCAAGTCCGGTGAC
GCTGCCATCGTCAAGATGATTCCCTCCAAGCCCATGTGTGTTGAGGCTTT
CACTGACTACCCCCCTCTTGGTCGTTTCGCTGTCCGCGACATGCGCCAGA
CTGTTGCTGTCGGTGTTATCAAGGCTGTTGAGAAGAAGGAGGGTGGTTCC
GGTAAGGTTACCAAGGCCGCCCAGAAGGCCGGTAAGAAATAAGAAGCCGC
CGAGCTCGGTAAGGGTTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCA
AGTCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTC
CAGACTGGCAAGTATGAGGTCACCGTCATTGTAAGGAGGACAAGACTCAC
ATCAACATCGTCGTTATCGGCCACGTCGATTCCGGCAAGTCCACCACCAC
TGGTCACCTGATCTACAAGTGCGGTGGTATCGACCAGCGTACCATCGAGA
AGTTCGAGAAGATGGGACGCCCCCGGTCACCGTGACTTCATCAAGAACAT
GATCACTGGTACCTCCCAGGCTGACTGCGCTATCCTCATCATTGCCTCCG
GTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGCCAGACTCGTGAG
CACGCTCTGCTTGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCT
CAACAAGATGGACACCTGCAAGTGGTCCGAGGACCGTTACAACGAAATCG
TTAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTACAACCCCAAGGGT
GTTCCTTTCGTCCCCATCTCCGGTTTCAACGGTGACAACATGCTCGAGCC
CTCCCCCAACTGCCCCTGGTACAAGGGTTGGGAGAAGGAGACCAAGGCCG
GCAAGGTCACCGGTAAGACCCTCCTCGAGGCCATCGACGCCATCGAGCCC
CCCGTCCGTCCCTCCAACAAGCCCCTCCGTCTTCCCCTCCAGGATGTCTA
CAAGATCTCCGGTATTGGAACTGTTCCCGTCGGTCGTGTCGAGACCGGTA
TCATTGCCCCTGGTATGGTCGTGACCTTCGCTCCCGCCAACGTCACCACT
GAAGTCAAGTCCGTTGAGATGCACCACCAGCAGCTCAAGGAGGGTGTCCC
CGGTGACAACGTTGGTTTCAACGTCAAGAACGTTTCCGTCAAGGAGGTTC
GCCGTGGTAACGTTGCCGGTGACTCCAAGAACGACCCCCCTCTTGGCTGT
GAGAGCTTCACCGCCCAGGTCATCGTCCTCAACCACCCCGGTCAGGTCGG
CGCTGGTTACGCTCCCGTCCTGGACTGCCACACTGCTCACATTGCTTGCA
AGTTCGCTGAGCTCCTTGAGAAGATTGACCGCCGTACCGGAAAGTCTGTT
GAATCTTCCCCCAAGTTCATCAAGTCCGGTGACGCTGCCATCGTCAAGAT
GATTCCCTCCAAGCCCATGTGTGTTGAGGCTTTCACTGACTACCCCCCTC
TTGGTCGTTTCGCTGTCCGCGACATGCGCCAGACTGTTGCTGTCGGTGTT
ATCAAGGCTGTTGAGAAGAAGGAGGGTGGTTCCGGTAAGGTTACCAAGGC
CGCCCAGAAGGCCGGTAAGAAATAAGAAGCCGCCGAGCTCGGTAAGGGTT
CCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGTCCGAGCGTGAGCGT
GGTATCACCATCGACATTGCCCTCTGGAAGTTCCAGACTGGCAAGTATGA
GGTCACCGTCATTGTAAGGAGGACAAGACTCACATCAACATCGTCGTTAT
CGGCCACGTCGATTCCGGCAAGTCCACCACCACTGGTCACCTGATCTACA
AGTGCGGTGGTATCGACCAGCGTACCATCGAGAAGTTCGAGAAGATGGGA
CGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCC
AGGCTGACTGCGCTATCCTCATCATTGCCTCCGGTACTGGTGAGTTCGAG
GCTGGTATCTCCAAGGATGGCCAGACTCGTGAGCACGCTCTGCTTGCTTT
CACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACCT
GCAAGTGGTCCGAGGACCGTTACAACGAAATCGTTAAGGAGACCTCCAAC
TTCATCAAGAAGGTCGGCTACAACCCCAAGGGTGTTCCTTTCGTCCCCAT
CTCCGGTTTCAACGGTGACAACATGCTCGAGCCCTCCCCCAACTGCCCCT
GGTACAAGGGTTGGGAGAAGGAGACCAAGGCCGGCAAGGTCACCGGTAAG
ACCCTCCTCGAGGCCATCGACGCCATCGAGCCCCCCGTCCGTCCCTCCAA
CAAGCCCCTCCGTCTTCCCCTCCAGGATGTCTACAAGATCTCCGGTATTG
GAACTGTTCCCGTCGGTCGTGTCGAGACCGGTATCATTGCCCCTGGTATG
GTCGTGACCTTCGCTCCCGCCAACGTCACCACTGAAGTCAAGTCCGTTGA
GATGCACCACCAGCAGCTCAAGGAGGGTGTCCCCGGTGACAACGTTGGTT
TCAACGTCAAGAACGTTTCCGTCAAGGAGGTTCGCCGTGGTAACGTTGCC
GGTGACTCCAAGAACGACCCCCCTCTTGGCTGTGAGAGCTTCACCGCCCA
GGTCATCGTCCTCAACCACCCCGGTCAGGTCGGCGCTGGTTACGCTCCCG
TCCTGGACTGCCACACTGCTCACATTGCTTGCAAGTTCGCTGAGCTCCTT
GAGAAGATTGACCGCCGTACCGGAAAGTCTGTTGAATCTTCCCCCAAGTT
CATCAAGTCCGGTGACGCTGCCATCGTCAAGATGATTCCCTCCAAGCCCA
TGTGTGTTGAGGCTTTCACTGACTACCCCCCTCTTGGTCGTTTCGCTGTC
CGCGACATGCGCCAGACTGTTGCTGTCGGTGTTATCAAGGCTGTTGAGAA
GAAGGAGGGTGGTTCCGGTAAGGTTACCAAGGCCGCCCAGAAGGCCGGTA
AGAAATAAGAAGCCGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCTTGG
GTTCTTGACAAGCTCAAGTCCGAGCGTGAGCGTGGTATCACCATCGACAT
TGCCCTCTGGAAGTTCCAGACTGGCAAGTATGAGGTCACCGTCATTGTAA
GGAGGACAAGACTCACATCAACATCGTCGTTATCGGCCACGTCGATTCCG
GCAAGTCCACCACCACTGGTCACCTGATCTACAAGTGCGGTGGTATCGAC
CAGCGTACCATCGAGAAGTTCGAGAAGATGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TEF1KJC3_011622Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011622-T1KJC3_011622-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011622-T1.cdsKJC3_011622-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011622-T1.utr3p1KJC3_011622-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011622-T1.exon4KJC3_011622-T1.exon4Aspergillus niger KJC3exon
KJC3_011622-T1.exon3KJC3_011622-T1.exon3Aspergillus niger KJC3exon
KJC3_011622-T1.exon2KJC3_011622-T1.exon2Aspergillus niger KJC3exon
KJC3_011622-T1.exon1KJC3_011622-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011622-T1.utr5p1KJC3_011622-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009001
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR031157
DBxrefInterPro:IPR004539
DBxrefInterPro:IPR004160
DBxrefInterPro:IPR004161
DBxrefInterPro:IPR000795
DBxrefPFAM:PF03143
DBxrefPFAM:PF03144
DBxrefPFAM:PF00009
Producttranslation elongation factor EF-1 alpha
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1161350..1163252 -
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