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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1164882..1165485- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011623-T1 ID=KJC3_011623-T1|Name=KJC3_011623-T1|organism=Aspergillus niger KJC3|type=mRNA|length=604bp|location=Sequence derived from alignment at ch8:1164882..1165485- (Aspergillus niger KJC3)
ATGCCGTTGACCTGTTAGTTTTCTCCTGCAGTCCCTACATCTACAGTACT
TTTTTTTTGGCTAACTGTCACCTTTCTACTCCCCAGTCTGCCCTAATTGC
AGCAATGCGCTCACGATTTCTCGTGCGGAGCCGACCACAAGGCATCCCTT
AGGCGTTAATCGATTCGAGTGTCGCACATGCCCATACCAATATGCCCTCG
ACCAGAGCTGGTTTGAGAAGACACCCATGAAACAAAAAGAAGTGGAGGAT
GTCTTTGGAGGAAAGGAAGAATTCGCAAATGCGGATAGCATGGCCAGTAA
GTTACGAACTTTGAGGGGCACTCTTCCCTACGGTTGTTGGAATAAACTTG
GGGGCTTGGGGCTAATGTTGTGCTTTCTCTTCCTTTTCCCCTACCCGCAG
CTCAATGCCCCGCAGAAGACTGTAATGGCGACCGCGCATACTTTTTCCAG
CTGCAGATTCGGAGTGCAGACGAGCCGATGACCACATTCCTAAAGGTGGG
TGCGCACCGGCGGCTTATGCGGTTCTCATGCATCTGGCCTGACATGCTTT
GCTGATTGCGGTTGACAGTGTACCACGTGTGGTGCCCGATGGAGAGAGAA
CTGA back to topCoding sequence (CDS) from alignment at ch8:1164882..1165485- >KJC3_011623-T1 ID=KJC3_011623-T1|Name=KJC3_011623-T1|organism=Aspergillus niger KJC3|type=CDS|length=1416bp|location=Sequence derived from alignment at ch8:1164882..1165485- (Aspergillus niger KJC3)
TGTACCACGTGTGGTGCCCGATGGAGAGAGAACTGACTCAATGCCCCGCA
GAAGACTGTAATGGCGACCGCGCATACTTTTTCCAGCTGCAGATTCGGAG
TGCAGACGAGCCGATGACCACATTCCTAAAGTCTGCCCTAATTGCAGCAA
TGCGCTCACGATTTCTCGTGCGGAGCCGACCACAAGGCATCCCTTAGGCG
TTAATCGATTCGAGTGTCGCACATGCCCATACCAATATGCCCTCGACCAG
AGCTGGTTTGAGAAGACACCCATGAAACAAAAAGAAGTGGAGGATGTCTT
TGGAGGAAAGGAAGAATTCGCAAATGCGGATAGCATGGCCAATGCCGTTG
ACCTTGTACCACGTGTGGTGCCCGATGGAGAGAGAACTGACTCAATGCCC
CGCAGAAGACTGTAATGGCGACCGCGCATACTTTTTCCAGCTGCAGATTC
GGAGTGCAGACGAGCCGATGACCACATTCCTAAAGTCTGCCCTAATTGCA
GCAATGCGCTCACGATTTCTCGTGCGGAGCCGACCACAAGGCATCCCTTA
GGCGTTAATCGATTCGAGTGTCGCACATGCCCATACCAATATGCCCTCGA
CCAGAGCTGGTTTGAGAAGACACCCATGAAACAAAAAGAAGTGGAGGATG
TCTTTGGAGGAAAGGAAGAATTCGCAAATGCGGATAGCATGGCCAATGCC
GTTGACCTTGTACCACGTGTGGTGCCCGATGGAGAGAGAACTGACTCAAT
GCCCCGCAGAAGACTGTAATGGCGACCGCGCATACTTTTTCCAGCTGCAG
ATTCGGAGTGCAGACGAGCCGATGACCACATTCCTAAAGTCTGCCCTAAT
TGCAGCAATGCGCTCACGATTTCTCGTGCGGAGCCGACCACAAGGCATCC
CTTAGGCGTTAATCGATTCGAGTGTCGCACATGCCCATACCAATATGCCC
TCGACCAGAGCTGGTTTGAGAAGACACCCATGAAACAAAAAGAAGTGGAG
GATGTCTTTGGAGGAAAGGAAGAATTCGCAAATGCGGATAGCATGGCCAA
TGCCGTTGACCTTGTACCACGTGTGGTGCCCGATGGAGAGAGAACTGACT
CAATGCCCCGCAGAAGACTGTAATGGCGACCGCGCATACTTTTTCCAGCT
GCAGATTCGGAGTGCAGACGAGCCGATGACCACATTCCTAAAGTCTGCCC
TAATTGCAGCAATGCGCTCACGATTTCTCGTGCGGAGCCGACCACAAGGC
ATCCCTTAGGCGTTAATCGATTCGAGTGTCGCACATGCCCATACCAATAT
GCCCTCGACCAGAGCTGGTTTGAGAAGACACCCATGAAACAAAAAGAAGT
GGAGGATGTCTTTGGAGGAAAGGAAGAATTCGCAAATGCGGATAGCATGG
CCAATGCCGTTGACCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042779 | tRNA 3'-trailer cleavage |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926539T |
| DBxref | InterPro:IPR034014 |
| DBxref | InterPro:IPR001529 |
| DBxref | InterPro:IPR012164 |
| DBxref | InterPro:IPR001222 |
| DBxref | PFAM:PF01096 |
| DBxref | PFAM:PF02150 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1164882..1165485 - |
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