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KJC3_011637-T1, KJC3_011637-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011637-T1
Unique NameKJC3_011637-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1198418..1199979-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011637-T1 ID=KJC3_011637-T1|Name=KJC3_011637-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1562bp|location=Sequence derived from alignment at ch8:1198418..1199979- (Aspergillus niger KJC3)
GTCCTCTATACCTCATCATCTCATCTCTCATCGTGTCTAGGGCCTCCCCG
CTCTGTGCATTACCTGTCACTTCGTTGGCAGATTTAGAACTACCCGCAAT
CCCTCCAGATTTCCTCCGCCGCCCCTCACAGCCCCGATCTAGTCATGGCA
CCCTCTTCGACGACCGCTGGGCGGATAGACGAAGCCCGGGGTCTCGTGAA
GAGCGACCCTTCCAAGGCCGAGAGCATCCTCAAGGAAATCCTTGCGCAAG
GTACCGGCTCGTCTGAGGCCTCATCGCGCGATTACGAGAATGCCCTGGTG
TTGCTGGGAGAGCTCTACCGGGACCAGAAGAAGCCCCACGAGATTGCCGA
ACTCATCAAGACCAGCCGCGATTCCTTCTCTTCATTTGCCAAGGCAAAGA
CAGCTAAGCTGGGTATGTAGCATTGACAGAGATGATGTTTTGCTTCCAGG
GTTACTGACCACCCGTCCTCTGATAGTCCGCCAGCTGTTGGACCTGTTCA
GCGAGATCCCGAACACACTCGATATCCAAGTTTCCGTCATCCAATCATGC
ATTGAATGGGCCATCGCCGAGCGGAGGTCCTTCCTTCGTCAGAACCTCCA
GACTCGCCTTGTAGCTATCTACATGCAGAAACAGACCTACTACGATGCGC
TCACCCTCATCAACTCCCTCCTCCGCGAGCTAAAGCGCCTGGATGACAAG
CTCATGCTGGTTGAGGTGCAGCTGCTGGAGTCGCGGGTGTACCATGCATT
GGGCAACCAGGCCAAGGCACGTGCTGCCTTGACGGCAGCCCGGACATCGG
CCGCTTCCGTTTACACGCCGCCGAACCTGCAGGCCGGTCTCGACATGCAG
AGTGGTATGCTACACGCAGAGGACAAGGATTTCAACACGTCATTCTCCTA
TTTCATTGAGGCTCTGGAAGGGTACAGCTCCCTCGATGAGGGAGAAAAGG
CCACTGCGGCCCTCCAATATATGCTGCTGTGCAAGATCATGTTGAACCTG
GTGGATGATGTGACAAATTTGCTGGGATCGAAGCAGGCTCAGAAGTATGC
CAGCCCGCGACTCGAGGCCATGAAGGCTGTGGCGCGTGCACATGCCAACC
GGTCCCTGGAGGAGTACGAAAAGGCGCTCTCGGACTACCGGTTCGAGCTG
GGCAGTGATACATTCATCCGCAACCACCTCCGCAGATTGTACGATGCCAT
GTTGGAGCAGAACCTGATCAAGGTTATTGAACCTTTCAGCCGGGTCGAGC
TGGACCACATTGCTAAGATGGTTGGGCTGGACACGCAGCAGGTGGAGCGG
AAGCTCTCCCAGATGATCCTGGACAAGGTGATTATTGGAGTGCTCGACCA
GGGGGCTGGATGCCTGATTGTCTACGATGAGACGGAGCGGGACCAGGCAT
ACGATGCTGCGTTGGACACGATCGAGAAGCTGAGCAATGTGGTGGAAGAG
CTGTACACTAATCAAGCATCGCTGCTAGAGTAAGAAACGGCAACTGATGC
GGGGGTTATTGAGTTAATGGCTTGGAAATGAAACAGCATTACTACAAATG
AATATATGAGAG
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Coding sequence (CDS) from alignment at ch8:1198418..1199979-

>KJC3_011637-T1 ID=KJC3_011637-T1|Name=KJC3_011637-T1|organism=Aspergillus niger KJC3|type=CDS|length=2550bp|location=Sequence derived from alignment at ch8:1198418..1199979- (Aspergillus niger KJC3)
TCCGCCAGCTGTTGGACCTGTTCAGCGAGATCCCGAACACACTCGATATC
CAAGTTTCCGTCATCCAATCATGCATTGAATGGGCCATCGCCGAGCGGAG
GTCCTTCCTTCGTCAGAACCTCCAGACTCGCCTTGTAGCTATCTACATGC
AGAAACAGACCTACTACGATGCGCTCACCCTCATCAACTCCCTCCTCCGC
GAGCTAAAGCGCCTGGATGACAAGCTCATGCTGGTTGAGGTGCAGCTGCT
GGAGTCGCGGGTGTACCATGCATTGGGCAACCAGGCCAAGGCACGTGCTG
CCTTGACGGCAGCCCGGACATCGGCCGCTTCCGTTTACACGCCGCCGAAC
CTGCAGGCCGGTCTCGACATGCAGAGTGGTATGCTACACGCAGAGGACAA
GGATTTCAACACGTCATTCTCCTATTTCATTGAGGCTCTGGAAGGGTACA
GCTCCCTCGATGAGGGAGAAAAGGCCACTGCGGCCCTCCAATATATGCTG
CTGTGCAAGATCATGTTGAACCTGGTGGATGATGTGACAAATTTGCTGGG
ATCGAAGCAGGCTCAGAAGTATGCCAGCCCGCGACTCGAGGCCATGAAGG
CTGTGGCGCGTGCACATGCCAACCGGTCCCTGGAGGAGTACGAAAAGGCG
CTCTCGGACTACCGGTTCGAGCTGGGCAGTGATACATTCATCCGCAACCA
CCTCCGCAGATTGTACGATGCCATGTTGGAGCAGAACCTGATCAAGGTTA
TTGAACCTTTCAGCCGGGTCGAGCTGGACCACATTGCTAAGATGGTTGGG
CTGGACACGCAGCAGGTGGAGCGGAAGCTCTCCCAGATGATCCTGGACAA
GGTGATTATTGGAGTGCTCGACCAGGGGGCTGGATGCCTGATTGTCTACG
ATGAGACGGAGCGGGACCAGGCATACGATGCTGCGTTGGACACGATCGAG
AAGCTGAGCAATGTGGTGGAAGAGCTGTACACTAATCAAGCATCGCTGCT
AGAGTAAATGGCACCCTCTTCGACGACCGCTGGGCGGATAGACGAAGCCC
GGGGTCTCGTGAAGAGCGACCCTTCCAAGGCCGAGAGCATCCTCAAGGAA
ATCCTTGCGCAAGGTACCGGCTCGTCTGAGGCCTCATCGCGCGATTACGA
GAATGCCCTGGTGTTGCTGGGAGAGCTCTACCGGGACCAGAAGAAGCCCC
ACGAGATTGCCGAACTCATCAAGACCAGCCGCGATTCCTTCTCTTCATTT
GCCAAGGCAAAGACAGCTAAGCTGGTCCGCCAGCTGTTGGACCTGTTCAG
CGAGATCCCGAACACACTCGATATCCAAGTTTCCGTCATCCAATCATGCA
TTGAATGGGCCATCGCCGAGCGGAGGTCCTTCCTTCGTCAGAACCTCCAG
ACTCGCCTTGTAGCTATCTACATGCAGAAACAGACCTACTACGATGCGCT
CACCCTCATCAACTCCCTCCTCCGCGAGCTAAAGCGCCTGGATGACAAGC
TCATGCTGGTTGAGGTGCAGCTGCTGGAGTCGCGGGTGTACCATGCATTG
GGCAACCAGGCCAAGGCACGTGCTGCCTTGACGGCAGCCCGGACATCGGC
CGCTTCCGTTTACACGCCGCCGAACCTGCAGGCCGGTCTCGACATGCAGA
GTGGTATGCTACACGCAGAGGACAAGGATTTCAACACGTCATTCTCCTAT
TTCATTGAGGCTCTGGAAGGGTACAGCTCCCTCGATGAGGGAGAAAAGGC
CACTGCGGCCCTCCAATATATGCTGCTGTGCAAGATCATGTTGAACCTGG
TGGATGATGTGACAAATTTGCTGGGATCGAAGCAGGCTCAGAAGTATGCC
AGCCCGCGACTCGAGGCCATGAAGGCTGTGGCGCGTGCACATGCCAACCG
GTCCCTGGAGGAGTACGAAAAGGCGCTCTCGGACTACCGGTTCGAGCTGG
GCAGTGATACATTCATCCGCAACCACCTCCGCAGATTGTACGATGCCATG
TTGGAGCAGAACCTGATCAAGGTTATTGAACCTTTCAGCCGGGTCGAGCT
GGACCACATTGCTAAGATGGTTGGGCTGGACACGCAGCAGGTGGAGCGGA
AGCTCTCCCAGATGATCCTGGACAAGGTGATTATTGGAGTGCTCGACCAG
GGGGCTGGATGCCTGATTGTCTACGATGAGACGGAGCGGGACCAGGCATA
CGATGCTGCGTTGGACACGATCGAGAAGCTGAGCAATGTGGTGGAAGAGC
TGTACACTAATCAAGCATCGCTGCTAGAGTAAATGGCACCCTCTTCGACG
ACCGCTGGGCGGATAGACGAAGCCCGGGGTCTCGTGAAGAGCGACCCTTC
CAAGGCCGAGAGCATCCTCAAGGAAATCCTTGCGCAAGGTACCGGCTCGT
CTGAGGCCTCATCGCGCGATTACGAGAATGCCCTGGTGTTGCTGGGAGAG
CTCTACCGGGACCAGAAGAAGCCCCACGAGATTGCCGAACTCATCAAGAC
CAGCCGCGATTCCTTCTCTTCATTTGCCAAGGCAAAGACAGCTAAGCTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011637KJC3_011637Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011637-T1KJC3_011637-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011637-T1.cdsKJC3_011637-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011637-T1.utr3p1KJC3_011637-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011637-T1.exon2KJC3_011637-T1.exon2Aspergillus niger KJC3exon
KJC3_011637-T1.exon1KJC3_011637-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011637-T1.utr5p1KJC3_011637-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092630YS
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR040780
DBxrefInterPro:IPR040773
DBxrefInterPro:IPR000717
DBxrefPFAM:PF18055
DBxrefPFAM:PF18503
DBxrefPFAM:PF01399
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1198418..1199979 -
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