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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1221456..1222997+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011649-T1 ID=KJC3_011649-T1|Name=KJC3_011649-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1542bp|location=Sequence derived from alignment at ch8:1221456..1222997+ (Aspergillus niger KJC3)
CGCAACGGCATGTACTACACTAACTGCCCCTTCTGGGGTCCTTTCTCCGC
ATCAATCTATCTTCGACCTCTAGATAAAGAAGCGTCCCCCGTAGGCCCTA
TCATTGTCCTTAATCGTTAATCGTGTTTGGTGGATTTTCTGCATTTTGAT
CAACCTTCGATAATGTCAACCCCAGGAGCTGGTCATGAATTTCCTCGCCA
GGAGGTGTCCTGGCTCAAGCGTGACGCTCTGCTATTTGCCTACAGTATCG
GCTGCAAGGCCGATGAGCTGCATTTCCTCTACGTGAGTTCCACTTTATAG
CCTTATATCAATTATACACTTATCTTACTGAGGCTCTCACAGGAGCTTCA
CCCAAACTTCGCTGTCTTTCCCACATATCCTCTAATCCTTCGTATGTATA
ATTTACTCGGCCAAGCCTAAGAGGTGAAGTGGTGTTTAAGAGTCATGTTT
TGGATATGAACTCTCGGGATTGATTGTTTACAGCTGGATGGAATGAATAC
CCCGCTAATAATATATTCCATACAGCGTTCAAGCTCACTGATCAAGAAGT
AACGGACTTCTATGCCCGTTCTGGCGGATCTCCTATCCCTGGTGTTCCGA
AGTTCGACTATCGCCGCGTCGTTGACGGCCAGCGCAAGCTCACCATCCTC
AAGCCCTTGCCCCCAACGAGCGAGGGTAAGAAGTTCGAGCTACGCAACAA
GGTCATTGGAGTCTATGACAAGGGCAAGCCTGGCACTGTCATCGAAACAG
AACAGACCATTGTGGATAAGGAGACAGGTGAGATCTACTCAAGAACTGTG
GGCAGCGGTTTCTTCGTTGGCCAGGGTAATTGGGGTGGACCGAAAGGTAA
GGCTTCCAAAGGCACTCGTTACATCAAAGAGTCTTGTTACTGACGCGGTT
ATTTTTAGGCCCCAGCAATGTCAACTATGCCCCACCTGAAGGCAAGCAGC
CAGATGCCGTCCATGTAGTTCAAACAACTCCGGAGACAGCCCATCTCTAT
CGGTGAGACACCGCCCCAGCCACATAAGAGTACTAGCGTCGTGGAAAAGG
TGGATCCTCAATTGCTGACAATGATTCCGCTGATTAGACTCAACGGGGAC
TACAACCCTCTACATGCTACCCCCGAGCCAGGTGAGAAGATGGGCTTCGG
CGGCGCCATCGTCCATGGCCTCTTCAGCTGGAATTCCGCTGCTCATGGTA
TCCTGCGGGAGCTCGGTGGTAGTGATCCGAAGAATCTTAAAGAGATTCAA
GCGCGCTTTGCTTCGCCAGTTATACCTGGTGACAAGCTTATCACTGAGAT
CTGGAGAACGGGCAGTCTCCAAGACGGTTATGAAGAAATCCGATTCGTAA
CCAAGAATGGTAAGGGCAAGGCGGTCCTGAGCAACGGCCGCTGCCTGATG
AAGGTCACCGGCCCAAGAAGCAAGCTATGATTGACACCTGTGGTCTAGTT
AGTTAGTGTAGAGATCTGTCACCAGCTGTTCTTCTATTAGTTAGCCCAGC
AAATTTACGGGCAGTTAATCTAATAATGGAGTCCATCGGCCA back to topCoding sequence (CDS) from alignment at ch8:1221456..1222997+ >KJC3_011649-T1 ID=KJC3_011649-T1|Name=KJC3_011649-T1|organism=Aspergillus niger KJC3|type=CDS|length=4635bp|location=Sequence derived from alignment at ch8:1221456..1222997+ (Aspergillus niger KJC3)
ATGTCAACCCCAGGAGCTGGTCATGAATTTCCTCGCCAGGAGGTGTCCTG
GCTCAAGCGTGACGCTCTGCTATTTGCCTACAGTATCGGCTGCAAGGCCG
ATGAGCTGCATTTCCTCTACGAGCTTCACCCAAACTTCGCTGTCTTTCCC
ACATATCCTCTAATCCTTCCGTTCAAGCTCACTGATCAAGAAGTAACGGA
CTTCTATGCCCGTTCTGGCGGATCTCCTATCCCTGGTGTTCCGAAGTTCG
ACTATCGCCGCGTCGTTGACGGCCAGCGCAAGCTCACCATCCTCAAGCCC
TTGCCCCCAACGAGCGAGGGTAAGAAGTTCGAGCTACGCAACAAGGTCAT
TGGAGTCTATGACAAGGGCAAGCCTGGCACTGTCATCGAAACAGAACAGA
CCATTGTGGATAAGGAGACAGGTGAGATCTACTCAAGAACTGTGGGCAGC
GGTTTCTTCGTTGGCCAGGGTAATTGGGGTGGACCGAAAGGCCCCAGCAA
TGTCAACTATGCCCCACCTGAAGGCAAGCAGCCAGATGCCGTCCATGTAG
TTCAAACAACTCCGGAGACAGCCCATCTCTATCGACTCAACGGGGACTAC
AACCCTCTACATGCTACCCCCGAGCCAGGTGAGAAGATGGGCTTCGGCGG
CGCCATCGTCCATGGCCTCTTCAGCTGGAATTCCGCTGCTCATGGTATCC
TGCGGGAGCTCGGTGGTAGTGATCCGAAGAATCTTAAAGAGATTCAAGCG
CGCTTTGCTTCGCCAGTTATACCTGGTGACAAGCTTATCACTGAGATCTG
GAGAACGGGCAGTCTCCAAGACGGTTATGAAGAAATCCGATTCGTAACCA
AGAATGGTAAGGGCAAGGCGGTCCTGAGCAACGGCCGCTGCCTGATGAAG
GTCACCGGCCCAAGAAGCAAGCTATGAATGTCAACCCCAGGAGCTGGTCA
TGAATTTCCTCGCCAGGAGGTGTCCTGGCTCAAGCGTGACGCTCTGCTAT
TTGCCTACAGTATCGGCTGCAAGGCCGATGAGCTGCATTTCCTCTACGAG
CTTCACCCAAACTTCGCTGTCTTTCCCACATATCCTCTAATCCTTCCGTT
CAAGCTCACTGATCAAGAAGTAACGGACTTCTATGCCCGTTCTGGCGGAT
CTCCTATCCCTGGTGTTCCGAAGTTCGACTATCGCCGCGTCGTTGACGGC
CAGCGCAAGCTCACCATCCTCAAGCCCTTGCCCCCAACGAGCGAGGGTAA
GAAGTTCGAGCTACGCAACAAGGTCATTGGAGTCTATGACAAGGGCAAGC
CTGGCACTGTCATCGAAACAGAACAGACCATTGTGGATAAGGAGACAGGT
GAGATCTACTCAAGAACTGTGGGCAGCGGTTTCTTCGTTGGCCAGGGTAA
TTGGGGTGGACCGAAAGGCCCCAGCAATGTCAACTATGCCCCACCTGAAG
GCAAGCAGCCAGATGCCGTCCATGTAGTTCAAACAACTCCGGAGACAGCC
CATCTCTATCGACTCAACGGGGACTACAACCCTCTACATGCTACCCCCGA
GCCAGGTGAGAAGATGGGCTTCGGCGGCGCCATCGTCCATGGCCTCTTCA
GCTGGAATTCCGCTGCTCATGGTATCCTGCGGGAGCTCGGTGGTAGTGAT
CCGAAGAATCTTAAAGAGATTCAAGCGCGCTTTGCTTCGCCAGTTATACC
TGGTGACAAGCTTATCACTGAGATCTGGAGAACGGGCAGTCTCCAAGACG
GTTATGAAGAAATCCGATTCGTAACCAAGAATGGTAAGGGCAAGGCGGTC
CTGAGCAACGGCCGCTGCCTGATGAAGGTCACCGGCCCAAGAAGCAAGCT
ATGAATGTCAACCCCAGGAGCTGGTCATGAATTTCCTCGCCAGGAGGTGT
CCTGGCTCAAGCGTGACGCTCTGCTATTTGCCTACAGTATCGGCTGCAAG
GCCGATGAGCTGCATTTCCTCTACGAGCTTCACCCAAACTTCGCTGTCTT
TCCCACATATCCTCTAATCCTTCCGTTCAAGCTCACTGATCAAGAAGTAA
CGGACTTCTATGCCCGTTCTGGCGGATCTCCTATCCCTGGTGTTCCGAAG
TTCGACTATCGCCGCGTCGTTGACGGCCAGCGCAAGCTCACCATCCTCAA
GCCCTTGCCCCCAACGAGCGAGGGTAAGAAGTTCGAGCTACGCAACAAGG
TCATTGGAGTCTATGACAAGGGCAAGCCTGGCACTGTCATCGAAACAGAA
CAGACCATTGTGGATAAGGAGACAGGTGAGATCTACTCAAGAACTGTGGG
CAGCGGTTTCTTCGTTGGCCAGGGTAATTGGGGTGGACCGAAAGGCCCCA
GCAATGTCAACTATGCCCCACCTGAAGGCAAGCAGCCAGATGCCGTCCAT
GTAGTTCAAACAACTCCGGAGACAGCCCATCTCTATCGACTCAACGGGGA
CTACAACCCTCTACATGCTACCCCCGAGCCAGGTGAGAAGATGGGCTTCG
GCGGCGCCATCGTCCATGGCCTCTTCAGCTGGAATTCCGCTGCTCATGGT
ATCCTGCGGGAGCTCGGTGGTAGTGATCCGAAGAATCTTAAAGAGATTCA
AGCGCGCTTTGCTTCGCCAGTTATACCTGGTGACAAGCTTATCACTGAGA
TCTGGAGAACGGGCAGTCTCCAAGACGGTTATGAAGAAATCCGATTCGTA
ACCAAGAATGGTAAGGGCAAGGCGGTCCTGAGCAACGGCCGCTGCCTGAT
GAAGGTCACCGGCCCAAGAAGCAAGCTATGAATGTCAACCCCAGGAGCTG
GTCATGAATTTCCTCGCCAGGAGGTGTCCTGGCTCAAGCGTGACGCTCTG
CTATTTGCCTACAGTATCGGCTGCAAGGCCGATGAGCTGCATTTCCTCTA
CGAGCTTCACCCAAACTTCGCTGTCTTTCCCACATATCCTCTAATCCTTC
CGTTCAAGCTCACTGATCAAGAAGTAACGGACTTCTATGCCCGTTCTGGC
GGATCTCCTATCCCTGGTGTTCCGAAGTTCGACTATCGCCGCGTCGTTGA
CGGCCAGCGCAAGCTCACCATCCTCAAGCCCTTGCCCCCAACGAGCGAGG
GTAAGAAGTTCGAGCTACGCAACAAGGTCATTGGAGTCTATGACAAGGGC
AAGCCTGGCACTGTCATCGAAACAGAACAGACCATTGTGGATAAGGAGAC
AGGTGAGATCTACTCAAGAACTGTGGGCAGCGGTTTCTTCGTTGGCCAGG
GTAATTGGGGTGGACCGAAAGGCCCCAGCAATGTCAACTATGCCCCACCT
GAAGGCAAGCAGCCAGATGCCGTCCATGTAGTTCAAACAACTCCGGAGAC
AGCCCATCTCTATCGACTCAACGGGGACTACAACCCTCTACATGCTACCC
CCGAGCCAGGTGAGAAGATGGGCTTCGGCGGCGCCATCGTCCATGGCCTC
TTCAGCTGGAATTCCGCTGCTCATGGTATCCTGCGGGAGCTCGGTGGTAG
TGATCCGAAGAATCTTAAAGAGATTCAAGCGCGCTTTGCTTCGCCAGTTA
TACCTGGTGACAAGCTTATCACTGAGATCTGGAGAACGGGCAGTCTCCAA
GACGGTTATGAAGAAATCCGATTCGTAACCAAGAATGGTAAGGGCAAGGC
GGTCCTGAGCAACGGCCGCTGCCTGATGAAGGTCACCGGCCCAAGAAGCA
AGCTATGAATGTCAACCCCAGGAGCTGGTCATGAATTTCCTCGCCAGGAG
GTGTCCTGGCTCAAGCGTGACGCTCTGCTATTTGCCTACAGTATCGGCTG
CAAGGCCGATGAGCTGCATTTCCTCTACGAGCTTCACCCAAACTTCGCTG
TCTTTCCCACATATCCTCTAATCCTTCCGTTCAAGCTCACTGATCAAGAA
GTAACGGACTTCTATGCCCGTTCTGGCGGATCTCCTATCCCTGGTGTTCC
GAAGTTCGACTATCGCCGCGTCGTTGACGGCCAGCGCAAGCTCACCATCC
TCAAGCCCTTGCCCCCAACGAGCGAGGGTAAGAAGTTCGAGCTACGCAAC
AAGGTCATTGGAGTCTATGACAAGGGCAAGCCTGGCACTGTCATCGAAAC
AGAACAGACCATTGTGGATAAGGAGACAGGTGAGATCTACTCAAGAACTG
TGGGCAGCGGTTTCTTCGTTGGCCAGGGTAATTGGGGTGGACCGAAAGGC
CCCAGCAATGTCAACTATGCCCCACCTGAAGGCAAGCAGCCAGATGCCGT
CCATGTAGTTCAAACAACTCCGGAGACAGCCCATCTCTATCGACTCAACG
GGGACTACAACCCTCTACATGCTACCCCCGAGCCAGGTGAGAAGATGGGC
TTCGGCGGCGCCATCGTCCATGGCCTCTTCAGCTGGAATTCCGCTGCTCA
TGGTATCCTGCGGGAGCTCGGTGGTAGTGATCCGAAGAATCTTAAAGAGA
TTCAAGCGCGCTTTGCTTCGCCAGTTATACCTGGTGACAAGCTTATCACT
GAGATCTGGAGAACGGGCAGTCTCCAAGACGGTTATGAAGAAATCCGATT
CGTAACCAAGAATGGTAAGGGCAAGGCGGTCCTGAGCAACGGCCGCTGCC
TGATGAAGGTCACCGGCCCAAGAAGCAAGCTATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011649-T1.utr5p1 | KJC3_011649-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011649-T1.utr3p1 | KJC3_011649-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029069 |
| DBxref | InterPro:IPR002539 |
| DBxref | PFAM:PF01575 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1221456..1222997 + |
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