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KJC3_011651-T1, KJC3_011651-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011651-T1
Unique NameKJC3_011651-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1225620..1227164+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011651-T1 ID=KJC3_011651-T1|Name=KJC3_011651-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1545bp|location=Sequence derived from alignment at ch8:1225620..1227164+ (Aspergillus niger KJC3)
ATGTCGACCTTGGAAGACCTCGACGACCTTGAGCGTGAGCAGAGAGACAA
GAAGAAGGACCAAGGAGATGACGGTGACGGCAGGAAGCCCGAAGGTGAAG
GAGATGCTGATATGAAAGATGCCGATGCCAAGAGAGATGAGGATGATGGA
CTCTTGGACGAGGAGATCCTTAGCTCGAGCACAGCGGACATCGTCAAGCG
ACGGCGGATGCTGGAGAACGAGCTGCGTATAATGAAGAGCGAATACCAGC
GCCTGACTCACGAGCAAAACACGATGCGAGAGAAAGTCAAGGATAACCAA
GAAAAGATCGAGAACAACAGGTAAGCTCCGGTTGTCTTCCGTTCCGCCAG
CGCCTGTTCGACGCGGTGGCAATTGCGGCGTAAGCCGGGTCTTTTACTGA
CTGTCCGTCTGCTAGGCAATTACCCTACCTGGTCGGAAACGTCGTCGAGC
TTTTGGATTTGGATGTTGAAGCTGAGGCGGCTGAGGAGGGGGCGAACATT
GACCTTGATGCTACACGGGTGGGCAAGTCGGCTGTCATCAAGACGTCGAC
CCGCCAGACTATCTATCTTCCTCTCATTGGTCTAGTAGATCACGAGAAGC
TGAAGCCTGGTGATCTGATCGGTGTCAACAAGGACTCATACCTCGTCCTG
GATACGCTACCTGCCGAGTACGATAACCGTGTCAAGGCCATGGAGGTCGA
TGAGAAGCCGACGGAGAAGTACACCGACATTGGTGGTTTGGATAAGCAAA
TCGAGGAAATTGTGGAGGCTATCGTATGGCCTATGAAGGAAGCTGACAGG
TTCAAGAAGCTTGGCATTAAGGCACCGAAAGGTATGTAATCGTGGATTTC
CCAGCCTAGCACGGGTCTTCTGACACACTTTCACAGGTGCTCTAATGTAT
GGGCCGCCCGGTACTGGTAAAACACTTCTTGCCCGAGCCTGTGCAGCAGA
GACGAACGCCACTTTCCTCAAGCTTGCCGGTCCGCAGTTGGTGCAGATGT
TCATCGGTGATGGTGCGAAACTCGTTCGTGACTGCTTCGCCCTTGCCAAG
GAGAAGGCACCTTCCATCATCTTCATCGACGAGCTGGATGCGGTCGGTAC
GAAGCGGTTCGACTCCGAGAAGTCCGGTGACCGTGAAGTGCAGCGAACCA
TGCTTGAACTTCTCAACCAGCTCGACGGATTTGCCTCGGACGATCGCATC
AAGGTTCTCGCGGCCACGAATCGTGTCGACGTTCTCGATCCCGCCCTGCT
CCGTTCCGGTCGTCTGGACCGCAAGATCGAGTTCCCGCTACCCAACGAGG
AGGCGAGAGCCAACATCCTGCAGATTCACTCCCGCAAAATGGCTGTGGAT
GACCGGGTTAACTGGGCGGAACTGGCCCGCAGTACCGACGAGTTTGGTGG
TGCTCAGCTGAAGGCCGTGTGCGTGGAGGCAGGTATGATTGCTCTCCGGA
AGGGCATGAGCAAGGTAGGACACGAGAACTACGTGGATGCCATTTCGGAA
GTACAGGCAAAGAAGAAGGACACGAACATGGGTATCTATGTCTAA
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Coding sequence (CDS) from alignment at ch8:1225620..1227164+

>KJC3_011651-T1 ID=KJC3_011651-T1|Name=KJC3_011651-T1|organism=Aspergillus niger KJC3|type=CDS|length=4185bp|location=Sequence derived from alignment at ch8:1225620..1227164+ (Aspergillus niger KJC3)
ATGTCGACCTTGGAAGACCTCGACGACCTTGAGCGTGAGCAGAGAGACAA
GAAGAAGGACCAAGGAGATGACGGTGACGGCAGGAAGCCCGAAGGTGAAG
GAGATGCTGATATGAAAGATGCCGATGCCAAGAGAGATGAGGATGATGGA
CTCTTGGACGAGGAGATCCTTAGCTCGAGCACAGCGGACATCGTCAAGCG
ACGGCGGATGCTGGAGAACGAGCTGCGTATAATGAAGAGCGAATACCAGC
GCCTGACTCACGAGCAAAACACGATGCGAGAGAAAGTCAAGGATAACCAA
GAAAAGATCGAGAACAACAGGCAATTACCCTACCTGGTCGGAAACGTCGT
CGAGCTTTTGGATTTGGATGTTGAAGCTGAGGCGGCTGAGGAGGGGGCGA
ACATTGACCTTGATGCTACACGGGTGGGCAAGTCGGCTGTCATCAAGACG
TCGACCCGCCAGACTATCTATCTTCCTCTCATTGGTCTAGTAGATCACGA
GAAGCTGAAGCCTGGTGATCTGATCGGTGTCAACAAGGACTCATACCTCG
TCCTGGATACGCTACCTGCCGAGTACGATAACCGTGTCAAGGCCATGGAG
GTCGATGAGAAGCCGACGGAGAAGTACACCGACATTGGTGGTTTGGATAA
GCAAATCGAGGAAATTGTGGAGGCTATCGTATGGCCTATGAAGGAAGCTG
ACAGGTTCAAGAAGCTTGGCATTAAGGCACCGAAAGGTGCTCTAATGTAT
GGGCCGCCCGGTACTGGTAAAACACTTCTTGCCCGAGCCTGTGCAGCAGA
GACGAACGCCACTTTCCTCAAGCTTGCCGGTCCGCAGTTGGTGCAGATGT
TCATCGGTGATGGTGCGAAACTCGTTCGTGACTGCTTCGCCCTTGCCAAG
GAGAAGGCACCTTCCATCATCTTCATCGACGAGCTGGATGCGGTCGGTAC
GAAGCGGTTCGACTCCGAGAAGTCCGGTGACCGTGAAGTGCAGCGAACCA
TGCTTGAACTTCTCAACCAGCTCGACGGATTTGCCTCGGACGATCGCATC
AAGGTTCTCGCGGCCACGAATCGTGTCGACGTTCTCGATCCCGCCCTGCT
CCGTTCCGGTCGTCTGGACCGCAAGATCGAGTTCCCGCTACCCAACGAGG
AGGCGAGAGCCAACATCCTGCAGATTCACTCCCGCAAAATGGCTGTGGAT
GACCGGGTTAACTGGGCGGAACTGGCCCGCAGTACCGACGAGTTTGGTGG
TGCTCAGCTGAAGGCCGTGTGCGTGGAGGCAGGTATGATTGCTCTCCGGA
AGGGCATGAGCAAGGTAGGACACGAGAACTACGTGGATGCCATTTCGGAA
GTACAGGCAAAGAAGAAGGACACGAACATGGGTATCTATGTCTAAATGTC
GACCTTGGAAGACCTCGACGACCTTGAGCGTGAGCAGAGAGACAAGAAGA
AGGACCAAGGAGATGACGGTGACGGCAGGAAGCCCGAAGGTGAAGGAGAT
GCTGATATGAAAGATGCCGATGCCAAGAGAGATGAGGATGATGGACTCTT
GGACGAGGAGATCCTTAGCTCGAGCACAGCGGACATCGTCAAGCGACGGC
GGATGCTGGAGAACGAGCTGCGTATAATGAAGAGCGAATACCAGCGCCTG
ACTCACGAGCAAAACACGATGCGAGAGAAAGTCAAGGATAACCAAGAAAA
GATCGAGAACAACAGGCAATTACCCTACCTGGTCGGAAACGTCGTCGAGC
TTTTGGATTTGGATGTTGAAGCTGAGGCGGCTGAGGAGGGGGCGAACATT
GACCTTGATGCTACACGGGTGGGCAAGTCGGCTGTCATCAAGACGTCGAC
CCGCCAGACTATCTATCTTCCTCTCATTGGTCTAGTAGATCACGAGAAGC
TGAAGCCTGGTGATCTGATCGGTGTCAACAAGGACTCATACCTCGTCCTG
GATACGCTACCTGCCGAGTACGATAACCGTGTCAAGGCCATGGAGGTCGA
TGAGAAGCCGACGGAGAAGTACACCGACATTGGTGGTTTGGATAAGCAAA
TCGAGGAAATTGTGGAGGCTATCGTATGGCCTATGAAGGAAGCTGACAGG
TTCAAGAAGCTTGGCATTAAGGCACCGAAAGGTGCTCTAATGTATGGGCC
GCCCGGTACTGGTAAAACACTTCTTGCCCGAGCCTGTGCAGCAGAGACGA
ACGCCACTTTCCTCAAGCTTGCCGGTCCGCAGTTGGTGCAGATGTTCATC
GGTGATGGTGCGAAACTCGTTCGTGACTGCTTCGCCCTTGCCAAGGAGAA
GGCACCTTCCATCATCTTCATCGACGAGCTGGATGCGGTCGGTACGAAGC
GGTTCGACTCCGAGAAGTCCGGTGACCGTGAAGTGCAGCGAACCATGCTT
GAACTTCTCAACCAGCTCGACGGATTTGCCTCGGACGATCGCATCAAGGT
TCTCGCGGCCACGAATCGTGTCGACGTTCTCGATCCCGCCCTGCTCCGTT
CCGGTCGTCTGGACCGCAAGATCGAGTTCCCGCTACCCAACGAGGAGGCG
AGAGCCAACATCCTGCAGATTCACTCCCGCAAAATGGCTGTGGATGACCG
GGTTAACTGGGCGGAACTGGCCCGCAGTACCGACGAGTTTGGTGGTGCTC
AGCTGAAGGCCGTGTGCGTGGAGGCAGGTATGATTGCTCTCCGGAAGGGC
ATGAGCAAGGTAGGACACGAGAACTACGTGGATGCCATTTCGGAAGTACA
GGCAAAGAAGAAGGACACGAACATGGGTATCTATGTCTAAATGTCGACCT
TGGAAGACCTCGACGACCTTGAGCGTGAGCAGAGAGACAAGAAGAAGGAC
CAAGGAGATGACGGTGACGGCAGGAAGCCCGAAGGTGAAGGAGATGCTGA
TATGAAAGATGCCGATGCCAAGAGAGATGAGGATGATGGACTCTTGGACG
AGGAGATCCTTAGCTCGAGCACAGCGGACATCGTCAAGCGACGGCGGATG
CTGGAGAACGAGCTGCGTATAATGAAGAGCGAATACCAGCGCCTGACTCA
CGAGCAAAACACGATGCGAGAGAAAGTCAAGGATAACCAAGAAAAGATCG
AGAACAACAGGCAATTACCCTACCTGGTCGGAAACGTCGTCGAGCTTTTG
GATTTGGATGTTGAAGCTGAGGCGGCTGAGGAGGGGGCGAACATTGACCT
TGATGCTACACGGGTGGGCAAGTCGGCTGTCATCAAGACGTCGACCCGCC
AGACTATCTATCTTCCTCTCATTGGTCTAGTAGATCACGAGAAGCTGAAG
CCTGGTGATCTGATCGGTGTCAACAAGGACTCATACCTCGTCCTGGATAC
GCTACCTGCCGAGTACGATAACCGTGTCAAGGCCATGGAGGTCGATGAGA
AGCCGACGGAGAAGTACACCGACATTGGTGGTTTGGATAAGCAAATCGAG
GAAATTGTGGAGGCTATCGTATGGCCTATGAAGGAAGCTGACAGGTTCAA
GAAGCTTGGCATTAAGGCACCGAAAGGTGCTCTAATGTATGGGCCGCCCG
GTACTGGTAAAACACTTCTTGCCCGAGCCTGTGCAGCAGAGACGAACGCC
ACTTTCCTCAAGCTTGCCGGTCCGCAGTTGGTGCAGATGTTCATCGGTGA
TGGTGCGAAACTCGTTCGTGACTGCTTCGCCCTTGCCAAGGAGAAGGCAC
CTTCCATCATCTTCATCGACGAGCTGGATGCGGTCGGTACGAAGCGGTTC
GACTCCGAGAAGTCCGGTGACCGTGAAGTGCAGCGAACCATGCTTGAACT
TCTCAACCAGCTCGACGGATTTGCCTCGGACGATCGCATCAAGGTTCTCG
CGGCCACGAATCGTGTCGACGTTCTCGATCCCGCCCTGCTCCGTTCCGGT
CGTCTGGACCGCAAGATCGAGTTCCCGCTACCCAACGAGGAGGCGAGAGC
CAACATCCTGCAGATTCACTCCCGCAAAATGGCTGTGGATGACCGGGTTA
ACTGGGCGGAACTGGCCCGCAGTACCGACGAGTTTGGTGGTGCTCAGCTG
AAGGCCGTGTGCGTGGAGGCAGGTATGATTGCTCTCCGGAAGGGCATGAG
CAAGGTAGGACACGAGAACTACGTGGATGCCATTTCGGAAGTACAGGCAA
AGAAGAAGGACACGAACATGGGTATCTATGTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPT5KJC3_011651Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011651-T1.exon1KJC3_011651-T1.exon1Aspergillus niger KJC3exon
KJC3_011651-T1.exon2KJC3_011651-T1.exon2Aspergillus niger KJC3exon
KJC3_011651-T1.exon3KJC3_011651-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011651-T1.cdsKJC3_011651-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011651-T1KJC3_011651-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003960
DBxrefInterPro:IPR041569
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR032501
DBxrefInterPro:IPR005937
DBxrefInterPro:IPR003593
DBxrefPFAM:PF16450
DBxrefPFAM:PF17862
DBxrefPFAM:PF00004
Product26S proteasome regulatory subunit 6A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1225620..1227164 +
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