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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1240845..1245060- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011659-T1 ID=KJC3_011659-T1|Name=KJC3_011659-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4216bp|location=Sequence derived from alignment at ch8:1240845..1245060- (Aspergillus niger KJC3)
GTCGTCATCCTTGACCCATCCCAAACTCTTGGTTCTGTTGGGTGGGATCG
GAGCTACGGTGTGCTACCGTCTACACCATCAAATCAACAAGAAGGATGAG
GAGGAAAAAGCCAATGCACGGTTTTCAGGCCTTTTGATCTACTGGTGATG
ATAATGATGATGCTCATCTGCGAAACATTTGCGGAGTCGCTCATCCTCCC
ACTGAATTGTCGCATCGTTACTTGTTTGGGGTGATACTACGGCCGCCACT
ACTGTCTCCAAAAGACTAACCCTCCAGCTAACGATTTAGTTCACGGGCCT
CTGTCCGCTTTTGCAATGGCAGTTGAATCCTGGAGTCGCCCGACAGTTTC
CTTCTGCTTAGTTCAGATTATTATCCTCCGTACGGCTGATGCAGCCCGTC
ATAACCGAGCATCGCTTCTTACTCCCCCCTGGCGATGGCTGCTCTTCCTT
GGGTCCATCAGTATTGGACGGATGAATATCGGATGGAGTGATGTTTGAGC
CGAAGTCTCCGCTTTTCCATTTCCAGCACGAGTCGCTGTGATGCCGATGC
CCTGCAGTCTCACCACGGACTAGTGAACCTAAGATCCTCGTTCCTCCGGT
GGGGACGATCGGCCCTCGACTGCCGTCCCAGGTCCTCCTATCTGGTAGTC
CGACCACTCTTGACTACAGAATGTACACTCTCGGAGAAGTGGCGTGTTCG
CGGTGGCCTGCCTCTTGACTTTCTCGTGCCATCAATGGTTTTGCGTTAAG
CTCTTTTGGGCGTCCAAACTAACTTCAGCCGACCAAATGTGTGGTCCTTG
ATACTTGTTGGCGCCCGCTCTCACGCTACTGTTCCCCTCGTTCTCCTAAA
ATAGCGCCGCGCTGTCTTTTTTTTCTTCTTTCCCTCTCGTTCTCAAGTAC
TTCCTTTTGGCCATCAGATTACAACTTTCGTTGTGATTTCTTACTGTTGC
TTGTTGTGTGTCCTTCATTTTCGTTCCTTACACCCACACTCCTTCGTATA
TACACGCTCTAGCTGGTGTGTCTCTTAATTCACTATTCATACATTCCTGT
CCCGTCCGTTCTTTTCGACCGTCGTTTCCCCACTCGAGCGCCTTTCCCCC
TTTCCCTGTCTCCAACGGTCCTTTGCGCACTATTATACAGGCCACCACCA
CCACCACCACTTTTCTTTACCCCTCTACTGGCTCTCCCCTGTGCGCCTTG
TTACGGTGCTCGTCAGATGCAACACCGGTGTTCATGATGAGTGTCGTCGC
CAGTAGACCCGAGAGCGCTGCTGTGCCTTTCAGCCCCATTCCTCAAAGCG
AATTTATACATTGCAAAGATGCAGCATATGCCGTGACAGTGCAGCCGGTC
TCCTCTCGAACGTCATCAGTTTCTTCCTTCAAGAGCAATTACAGTGTCTC
TACTGCCCCAACAGTCTACTCTCCTATCTCTCCCGCATCACCAGTTCGCG
TATTCGACTCCGCTGCTTCGCTGGATAAGATACTGGAGTCGGTATTCAAG
CGACTACCGCAAGAAGTCTACGATGTCATTCTTGATCAATTGGAACTTTT
ACATGTTGGCCCGAATCAGACCGGATGCTTAACATGCTTTCAGCGCGATT
TACACGCTCTTTCTTTGACCTGCCGGGCGTGGGAGAAAGTAGTCAGAGCG
AAGTTGTGAGTATATTGTTATGCCTTCGGGCACGCCCTTCGTCATAGCGA
TTCCCACGTATGCTAATCAAATCATCTCCATCCAGGTATAATCGCATACA
TATCATTGGAAATGATTCACCGTCGCAGTTGAAGAAGTACCGGCTTAAGA
GGGGAAGCCGCTTAAAGTTGCTCAGACGAACCCTCCGGGAGAGGAAGTTG
CTGGCCAATCTCGTTCTGGAGCTTCGAGTCCCCCAAATGGACCTGTTATT
CACCACCGTGAAGCAGAGCACTCAATGGCAAGAATACCGAGACCTAGTCG
CCTCGGTCGTCATGGTGTGCCCGAACTTGGAACGATTGCTCGGCTTGACC
ATCCCGTACAACCATGAGTTCGATCGCCTGACACATGCGTTGTCTACACG
TCGAAAGTTGAAGGAGCATACATGGGTTCTAGGAGAGGCCCCGGCGGTTT
CTGAAGAATCCCCTCGCAGCACATCTTGCCCCTGGAGCTTGGGCCCCTCG
CAAATGTTCGAGTTTCTTAACTACCATGTCTCATGGACTAATCTAGAGAC
GCTGATGCTTTATGGCGTGAACGAGAACAACGCCCTGGAACCGAGTATCT
TCCTTCGCATGGTCAGCCTTCTGCCGTCACTGCGGAATCTTTGCATTTCC
AACTTCGACGCAGATGCCTTTGCGGACAGCGCACTGCTGTGCCTACCGTC
GCTGGAATCGCTCCGCTTGGAGAACCTGCCGGGCGTAACTGATTCAGGGC
TGTGCCAATATGCCATGCGTCCGGAGTCTCACTCGCTCAAGACCTTGGCC
CTTGTGGAACAGAACATAGATTCGTTGCTTACGATTTCGAAAATCCTATC
GTCTCTAAGACAATTAGAACGATTCAAATTCGTCCAGAGCAACAAAAACC
CTACGCTGAACGCCGATGGGATTGTCTTTCAACCGCTTTTCGCCTCCTCG
ACCCTCCGATACCTGCATTGGGACGTTACGGGACCCGACTCTGCCGCCGG
ACTCGGCAGGCTCGATTACGCTCCGTTCGTGAAACCACCGCGGCATACAG
AATCACCAAATTCTCATTTGGCTCAGAGTATTCTGTCCGTGGGCTTCCCT
CGTCTTGAAGCACTGCGAGCACCCTCGGATATAGAACCTCCAGGAGTCCT
CCAGGCTGTATGCCAGCCGATACCACGCGGACAGGCACTGCTCAAGCCGG
ACCGTTACAGCCTTCCCCGTAGCTCCCACGGCTCTGTTACGACCCGACCA
ATGGCTCTGCCCGCGGGAAACAATCTGACCTCTGCTCGGATACGAGCACA
GACTTTTATCGATATGGCAGCGAAGGACACGGAAACTGGAATGCGGCTGC
TCATCACTGATCACTCGGATTCGTACGTTCCAGACAATGCATTGGACGAA
CTTTCCGATGATGGTTCCGACCTGGACATGGACGAGTTCGGCATAGGTGG
TGTGCAGCCTAAGAACGATGTCTTGCCCGACGATCACGAAGGTCCGGTCA
CAGTGTATGACTTCCGGATGCCAGCCTTCATGGGGAGGATAGGATCTAGG
ACAAGTGACAAGGACATCTCAATCCCAAAGTTTATCCTTCGTCCAGACAT
ACCAGGGCAGGATGGTGATGGGGGTCTAGTTGATTGGAAACATGTGCTGG
CCTCCAGCCAGTCGCTCACGTATGCTGCTGGAGTTGGAGTGAATTGCTTT
GGCGGCAAGGGCCACACTAAACCGGCCCCCGAGGAGCCACCATCGCCGAC
ATCAACTACAACCTCACGCTTTGGATGGGGCAGCATCGGTAGTCGGTCCG
CGCTGGGCACCAGTCCGAACACCCCTACAACACCAGCGACGCCGATGAGT
CTTTCGTCTACAACGGCACTCCCTTGGGACCGGGATACCTGCACCGGATC
ATGGAATTATAGCCACAAAAGTGGAAGGGACTGGTGGTTCCATATGGAAC
GAGACCGCCCAGGAAACGTCGAAATAGTCGACGTTAAGCGACTATTCTAG
TCAGGTTGATGTACATCACCGGTGACGTGCATTTGGATTTCATTTTTCAT
TGGTACTTTTAATTTTCTCAGGAATGGCATGCTATGGTACATGCTATCTG
TTGGTATACACGCAGAAACGGCGTTTACGGATTGACGGACGGATGGACGA
TCTCATCAATTGTGGATATTCTTTTTCTTTATTTCTCTGGGCGTGTTTCT
GGTCTCGACATACCCGGTGCAGCAGGGGTTATTCCCATCTCTCTCTCATT
AATTGGCATCTCTGACACACTCTCATTCTGGTGATTCTCGCTTACCGCAT
AGATTCCTATCATCTGGGTCATCTCCGTCTAATAGTGTTTGGCGCACATG
GAGAGAATCGCACCGGCGCGAGCAACGCATCTTACATAATGCTGCAGCTT
TTGTTTATATTGTATATCCATGTGCCTTCGTTTGTACAACTTATCATCTG
GGGTGGCATTTGTCGATTTTTACGTGTTTTGTTCCTGTGTACTTATAGTA
CTTACGTTGGTCAGACTGATCAGTACATATACTTAGTGCGTAATGCATTA
CTACGGACATCTAACA back to topCoding sequence (CDS) from alignment at ch8:1240845..1245060- >KJC3_011659-T1 ID=KJC3_011659-T1|Name=KJC3_011659-T1|organism=Aspergillus niger KJC3|type=CDS|length=4674bp|location=Sequence derived from alignment at ch8:1240845..1245060- (Aspergillus niger KJC3)
GTATAATCGCATACATATCATTGGAAATGATTCACCGTCGCAGTTGAAGA
AGTACCGGCTTAAGAGGGGAAGCCGCTTAAAGTTGCTCAGACGAACCCTC
CGGGAGAGGAAGTTGCTGGCCAATCTCGTTCTGGAGCTTCGAGTCCCCCA
AATGGACCTGTTATTCACCACCGTGAAGCAGAGCACTCAATGGCAAGAAT
ACCGAGACCTAGTCGCCTCGGTCGTCATGGTGTGCCCGAACTTGGAACGA
TTGCTCGGCTTGACCATCCCGTACAACCATGAGTTCGATCGCCTGACACA
TGCGTTGTCTACACGTCGAAAGTTGAAGGAGCATACATGGGTTCTAGGAG
AGGCCCCGGCGGTTTCTGAAGAATCCCCTCGCAGCACATCTTGCCCCTGG
AGCTTGGGCCCCTCGCAAATGTTCGAGTTTCTTAACTACCATGTCTCATG
GACTAATCTAGAGACGCTGATGCTTTATGGCGTGAACGAGAACAACGCCC
TGGAACCGAGTATCTTCCTTCGCATGGTCAGCCTTCTGCCGTCACTGCGG
AATCTTTGCATTTCCAACTTCGACGCAGATGCCTTTGCGGACAGCGCACT
GCTGTGCCTACCGTCGCTGGAATCGCTCCGCTTGGAGAACCTGCCGGGCG
TAACTGATTCAGGGCTGTGCCAATATGCCATGCGTCCGGAGTCTCACTCG
CTCAAGACCTTGGCCCTTGTGGAACAGAACATAGATTCGTTGCTTACGAT
TTCGAAAATCCTATCGTCTCTAAGACAATTAGAACGATTCAAATTCGTCC
AGAGCAACAAAAACCCTACGCTGAACGCCGATGGGATTGTCTTTCAACCG
CTTTTCGCCTCCTCGACCCTCCGATACCTGCATTGGGACGTTACGGGACC
CGACTCTGCCGCCGGACTCGGCAGGCTCGATTACGCTCCGTTCGTGAAAC
CACCGCGGCATACAGAATCACCAAATTCTCATTTGGCTCAGAGTATTCTG
TCCGTGGGCTTCCCTCGTCTTGAAGCACTGCGAGCACCCTCGGATATAGA
ACCTCCAGGAGTCCTCCAGGCTGTATGCCAGCCGATACCACGCGGACAGG
CACTGCTCAAGCCGGACCGTTACAGCCTTCCCCGTAGCTCCCACGGCTCT
GTTACGACCCGACCAATGGCTCTGCCCGCGGGAAACAATCTGACCTCTGC
TCGGATACGAGCACAGACTTTTATCGATATGGCAGCGAAGGACACGGAAA
CTGGAATGCGGCTGCTCATCACTGATCACTCGGATTCGTACGTTCCAGAC
AATGCATTGGACGAACTTTCCGATGATGGTTCCGACCTGGACATGGACGA
GTTCGGCATAGGTGGTGTGCAGCCTAAGAACGATGTCTTGCCCGACGATC
ACGAAGGTCCGGTCACAGTGTATGACTTCCGGATGCCAGCCTTCATGGGG
AGGATAGGATCTAGGACAAGTGACAAGGACATCTCAATCCCAAAGTTTAT
CCTTCGTCCAGACATACCAGGGCAGGATGGTGATGGGGGTCTAGTTGATT
GGAAACATGTGCTGGCCTCCAGCCAGTCGCTCACGTATGCTGCTGGAGTT
GGAGTGAATTGCTTTGGCGGCAAGGGCCACACTAAACCGGCCCCCGAGGA
GCCACCATCGCCGACATCAACTACAACCTCACGCTTTGGATGGGGCAGCA
TCGGTAGTCGGTCCGCGCTGGGCACCAGTCCGAACACCCCTACAACACCA
GCGACGCCGATGAGTCTTTCGTCTACAACGGCACTCCCTTGGGACCGGGA
TACCTGCACCGGATCATGGAATTATAGCCACAAAAGTGGAAGGGACTGGT
GGTTCCATATGGAACGAGACCGCCCAGGAAACGTCGAAATAGTCGACGTT
AAGCGACTATTCTAGATGATGAGTGTCGTCGCCAGTAGACCCGAGAGCGC
TGCTGTGCCTTTCAGCCCCATTCCTCAAAGCGAATTTATACATTGCAAAG
ATGCAGCATATGCCGTGACAGTGCAGCCGGTCTCCTCTCGAACGTCATCA
GTTTCTTCCTTCAAGAGCAATTACAGTGTCTCTACTGCCCCAACAGTCTA
CTCTCCTATCTCTCCCGCATCACCAGTTCGCGTATTCGACTCCGCTGCTT
CGCTGGATAAGATACTGGAGTCGGTATTCAAGCGACTACCGCAAGAAGTC
TACGATGTCATTCTTGATCAATTGGAACTTTTACATGTTGGCCCGAATCA
GACCGGATGCTTAACATGCTTTCAGCGCGATTTACACGCTCTTTCTTTGA
CCTGCCGGGCGTGGGAGAAAGTAGTCAGAGCGAAGTTGTATAATCGCATA
CATATCATTGGAAATGATTCACCGTCGCAGTTGAAGAAGTACCGGCTTAA
GAGGGGAAGCCGCTTAAAGTTGCTCAGACGAACCCTCCGGGAGAGGAAGT
TGCTGGCCAATCTCGTTCTGGAGCTTCGAGTCCCCCAAATGGACCTGTTA
TTCACCACCGTGAAGCAGAGCACTCAATGGCAAGAATACCGAGACCTAGT
CGCCTCGGTCGTCATGGTGTGCCCGAACTTGGAACGATTGCTCGGCTTGA
CCATCCCGTACAACCATGAGTTCGATCGCCTGACACATGCGTTGTCTACA
CGTCGAAAGTTGAAGGAGCATACATGGGTTCTAGGAGAGGCCCCGGCGGT
TTCTGAAGAATCCCCTCGCAGCACATCTTGCCCCTGGAGCTTGGGCCCCT
CGCAAATGTTCGAGTTTCTTAACTACCATGTCTCATGGACTAATCTAGAG
ACGCTGATGCTTTATGGCGTGAACGAGAACAACGCCCTGGAACCGAGTAT
CTTCCTTCGCATGGTCAGCCTTCTGCCGTCACTGCGGAATCTTTGCATTT
CCAACTTCGACGCAGATGCCTTTGCGGACAGCGCACTGCTGTGCCTACCG
TCGCTGGAATCGCTCCGCTTGGAGAACCTGCCGGGCGTAACTGATTCAGG
GCTGTGCCAATATGCCATGCGTCCGGAGTCTCACTCGCTCAAGACCTTGG
CCCTTGTGGAACAGAACATAGATTCGTTGCTTACGATTTCGAAAATCCTA
TCGTCTCTAAGACAATTAGAACGATTCAAATTCGTCCAGAGCAACAAAAA
CCCTACGCTGAACGCCGATGGGATTGTCTTTCAACCGCTTTTCGCCTCCT
CGACCCTCCGATACCTGCATTGGGACGTTACGGGACCCGACTCTGCCGCC
GGACTCGGCAGGCTCGATTACGCTCCGTTCGTGAAACCACCGCGGCATAC
AGAATCACCAAATTCTCATTTGGCTCAGAGTATTCTGTCCGTGGGCTTCC
CTCGTCTTGAAGCACTGCGAGCACCCTCGGATATAGAACCTCCAGGAGTC
CTCCAGGCTGTATGCCAGCCGATACCACGCGGACAGGCACTGCTCAAGCC
GGACCGTTACAGCCTTCCCCGTAGCTCCCACGGCTCTGTTACGACCCGAC
CAATGGCTCTGCCCGCGGGAAACAATCTGACCTCTGCTCGGATACGAGCA
CAGACTTTTATCGATATGGCAGCGAAGGACACGGAAACTGGAATGCGGCT
GCTCATCACTGATCACTCGGATTCGTACGTTCCAGACAATGCATTGGACG
AACTTTCCGATGATGGTTCCGACCTGGACATGGACGAGTTCGGCATAGGT
GGTGTGCAGCCTAAGAACGATGTCTTGCCCGACGATCACGAAGGTCCGGT
CACAGTGTATGACTTCCGGATGCCAGCCTTCATGGGGAGGATAGGATCTA
GGACAAGTGACAAGGACATCTCAATCCCAAAGTTTATCCTTCGTCCAGAC
ATACCAGGGCAGGATGGTGATGGGGGTCTAGTTGATTGGAAACATGTGCT
GGCCTCCAGCCAGTCGCTCACGTATGCTGCTGGAGTTGGAGTGAATTGCT
TTGGCGGCAAGGGCCACACTAAACCGGCCCCCGAGGAGCCACCATCGCCG
ACATCAACTACAACCTCACGCTTTGGATGGGGCAGCATCGGTAGTCGGTC
CGCGCTGGGCACCAGTCCGAACACCCCTACAACACCAGCGACGCCGATGA
GTCTTTCGTCTACAACGGCACTCCCTTGGGACCGGGATACCTGCACCGGA
TCATGGAATTATAGCCACAAAAGTGGAAGGGACTGGTGGTTCCATATGGA
ACGAGACCGCCCAGGAAACGTCGAAATAGTCGACGTTAAGCGACTATTCT
AGATGATGAGTGTCGTCGCCAGTAGACCCGAGAGCGCTGCTGTGCCTTTC
AGCCCCATTCCTCAAAGCGAATTTATACATTGCAAAGATGCAGCATATGC
CGTGACAGTGCAGCCGGTCTCCTCTCGAACGTCATCAGTTTCTTCCTTCA
AGAGCAATTACAGTGTCTCTACTGCCCCAACAGTCTACTCTCCTATCTCT
CCCGCATCACCAGTTCGCGTATTCGACTCCGCTGCTTCGCTGGATAAGAT
ACTGGAGTCGGTATTCAAGCGACTACCGCAAGAAGTCTACGATGTCATTC
TTGATCAATTGGAACTTTTACATGTTGGCCCGAATCAGACCGGATGCTTA
ACATGCTTTCAGCGCGATTTACACGCTCTTTCTTTGACCTGCCGGGCGTG
GGAGAAAGTAGTCAGAGCGAAGTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011659-T1.utr3p1 | KJC3_011659-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011659-T1.utr5p1 | KJC3_011659-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032675 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1240845..1245060 - |
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