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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1256082..1259100+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011661-T2 ID=KJC3_011661-T2|Name=KJC3_011661-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3019bp|location=Sequence derived from alignment at ch8:1256082..1259100+ (Aspergillus niger KJC3)
CAGAAGCTCCCTCTCCCACCGCCTCTTTTGCGGACATGTGAAGGTGAGGC
CGAACAGGTTATCGCTGTCACATACATACGTCAGTGGTCAGGCTGGCGCA
TACCTTATCGCTGCAGATGATTCATCTGCTGGCTTGGGTCGTGCTGGCAA
TGGTTCTGTTCAGCTTCCGCCAGGATGCAAGGCTACCGTACCTGTCTAGA
CCACATAGCTCTTGTGTAGCGAAAGTCAACGGATGACTGACCCTCGGAGG
AAATCCCGCATACTGCACTTGCTATTTGCCGTGTAGTAGTAGGGGGTTAG
GGGGGGTGTATCTACACGGGGAAGCCGATAACTGTTCAGCGGGAAACGGC
AACACAAGATGGCTCGCGCGATCACGAATCAGTTCGAAGGAACGAACCGT
CGGCGATCAGCGGAAAGGGACCATGACATCATGGTGCAGGAAGCGCCAAA
CGGACTCCAGCCTCGATGAGGGTCTCCGATTATCTCCATCATTGGTTCGG
CACGTGGCTGGAACAACTCTATATGCCTCAGGCATCAGGGGTATTCTGTG
TAATCACGTGATGCTAAACCGGGGACTCGGAGAAACCTAGTCCCGTCTGG
CTCTAGCGCGAATGGCTGCGGAAAGGAACATCCCCAAGGGCCTCCATTCA
GCTCTGTCGCTCCAGTAAATTCAGGTCGGCGTTCCTTGCCCATCTTACCA
TTCACCCGTCGGTATGGCTAGGAAACTTCGTGCGGCTGCTCAAGCAGCTG
CGCAATCAATGCGTACGTGACTTGCTTGGTTTCCACCTCAACCCTATCCT
TGGCCGCCGCGGCCTCGGTCGTCACGGACGCGAACAACTAATTACCCAGT
AGGGAATGCCGCCCCTCCGCTCCCCGATGCCTCGGACGAGGAGATGATCG
AAGCACCCCCATCGCGTGGATCATCACCAGCGATGGAAGATCCAGGAGAT
GCTTCGGATAAGGATCCTGAGGCGGAAGCCCAGGCAGAACCCAGCCAGGA
GGAAGAGACAGCCGCAACACCCGCCCAGGATTCAAACCCTCCATCGCGCG
GCGACACTCCTTCACGCATGGGTGGCCGCATGTCAGCCATCCCGCGAAAG
CGCCGCATAGGTCGTCCCCCGAAGAACCGTCCCCCAGACTGGGATGCGCC
TGATGACGGCGCCCCTCAGACACCGATCCATACGTCCACGCCGGTCAAGC
GCAGACGTGGTCGTCCCGCTGCTAGTGGTGGAAGGTGGGCACGTAACCGG
GGCCCGTCGCATGTTACCCAGGTTCCGATCGACAAGGAGGGGAACATGAT
GGACGTTATCGACGACGAAGTTGCCCTCCCAGACGACCCCGAGGGCGAGA
CGAAGGTGGACAAGAACGGCAATCTACTGGGCGATCGAGAATATAGGGTC
CGTGTGTTTACGATTCTCAACCGTGGAGATCGCAAATACATGTTGTCTAC
TGAGCCTGCGCGATGCATTGGTTTCAGGGACTCGTACCTTTTCTTCCAGA
AGCACAAACTACTGTATAAAATCATCATCGACGACGAGGCGAAACGCGAC
CTCATTGAACGGGAAATTATCCCCCACTCTTACAAAGGCCGAGCTATCGG
TGTCGTCACCGCTCGGTCTGTCTTCCGCGAATTCGGCGCAAAGATTATTG
TTGGTGGAAAGAAGGTCACCGATGATTACCATACACAGGCTGCGAGGGAG
CGTGGAGATGTCGAAGGCGAACTTGCCGTCCCTGAAGATAAGCTCCCTCC
TCCAGGCGAACCTTACAACAAGAACCAGTACGTAGCCTGGCACGGTGCCA
GTAGTGTCTATCACACCAGCGCCCCGTCGGTGCCTTTGCCCACCGGAAAG
GCGGTGGATTCGAAGAAGCGCAAGGTCACGGTTACTGGCGATAACTGGAT
GCTCGAACATGCTCGAGAGGCGAGGTATGTGATGACAAGCCTGTCTGACA
CTCTAGTGACTAACTTTACATGTAGCAACTTCAACTCGCTCATATCGCTT
GCGCGCCGCGAAAACCTTGAAGGACAGTACGACATCCATACAAACGTCAT
GCAGTACCCCAAGATCATGCAACCGACTCATGCCCGCTGGGAGCGTCTGC
CTCCTCCCGACCCTCGAGTTGCAACCAAATTAGCTCAGGGCATGTCCACG
TTGAGCCTGACGAACGGCACCGGCGAAGCAGAGCCAGCTGCTGCGGACAA
AGAAGCCCACGAACCCAGCGACAGCCAAACCGAACAACACACCACCGAGT
CTTCCCTCTTCTCCTCAGTTCCGGCTGCGCTTTCCCGCCGATTTGCCATT
CATGACATTCAGTTCGAATCTTCGCCGTATTCCAACCTGGGCGTTCCCGG
CCCAGACGGCGATGTGCACGATCTCGGCTCCAACGGCCTCATCAGTGTCG
CCGACTCCGCAAATCCCGAGTTTACGAGCCCCGAAATCCTGGAGGAACTT
CCTCCTGAGTGCAAGGAAGCCCTTATCGAGGCGGCTGCGCAAGAGTGGGA
ATGGAAATCCAAGTGGTGCCACGAAGCGAACGACGGGGCTCGCGCCAAAT
TACTCAAGAGTTACGCTTGGTTTCCATGATGTGCATGCTTTCTTATCCTA
TTTTCCCTCTTACTACCCCCCTTTCAAGCCACTGGAGGGACTTTTAACCA
AGGTCGTTCGCTACCTAATATACCACTTCCCTCGCAGTGGCTTTACCATT
CTTCTTTGCTTCGGGGGCTCACGTATATCTAACTAACCAACTGATTATTT
CCATTTCACTTCGGCAAACACACACTCAAATGGGCGGGGGTTTCATTCCG
GATGGGTTGCGAGATTATTTACCAAAAAACAGGGAGTTTGAGCGTTTCAA
TATCTGGAGTGTCGTTATAAGTGGTTACTTCTTTATTACTTTCTTATTTC
TATTCTCAAATCATATCTTATTCTTAGCCTTTGCCGTATATTCTCTTTTA
TCTCCAAATCTTATCCTCATTGCCATGAGATTATAATTTCAGTTTAGTCT
AAACGGATGGGAAGTAAAG back to topCoding sequence (CDS) from alignment at ch8:1256082..1259100+ >KJC3_011661-T2 ID=KJC3_011661-T2|Name=KJC3_011661-T2|organism=Aspergillus niger KJC3|type=CDS|length=5175bp|location=Sequence derived from alignment at ch8:1256082..1259100+ (Aspergillus niger KJC3)
ATGGCTAGGAAACTTCGTGCGGCTGCTCAAGCAGCTGCGCAATCAATGCG
GAATGCCGCCCCTCCGCTCCCCGATGCCTCGGACGAGGAGATGATCGAAG
CACCCCCATCGCGTGGATCATCACCAGCGATGGAAGATCCAGGAGATGCT
TCGGATAAGGATCCTGAGGCGGAAGCCCAGGCAGAACCCAGCCAGGAGGA
AGAGACAGCCGCAACACCCGCCCAGGATTCAAACCCTCCATCGCGCGGCG
ACACTCCTTCACGCATGGGTGGCCGCATGTCAGCCATCCCGCGAAAGCGC
CGCATAGGTCGTCCCCCGAAGAACCGTCCCCCAGACTGGGATGCGCCTGA
TGACGGCGCCCCTCAGACACCGATCCATACGTCCACGCCGGTCAAGCGCA
GACGTGGTCGTCCCGCTGCTAGTGGTGGAAGGTGGGCACGTAACCGGGGC
CCGTCGCATGTTACCCAGGTTCCGATCGACAAGGAGGGGAACATGATGGA
CGTTATCGACGACGAAGTTGCCCTCCCAGACGACCCCGAGGGCGAGACGA
AGGTGGACAAGAACGGCAATCTACTGGGCGATCGAGAATATAGGGTCCGT
GTGTTTACGATTCTCAACCGTGGAGATCGCAAATACATGTTGTCTACTGA
GCCTGCGCGATGCATTGGTTTCAGGGACTCGTACCTTTTCTTCCAGAAGC
ACAAACTACTGTATAAAATCATCATCGACGACGAGGCGAAACGCGACCTC
ATTGAACGGGAAATTATCCCCCACTCTTACAAAGGCCGAGCTATCGGTGT
CGTCACCGCTCGGTCTGTCTTCCGCGAATTCGGCGCAAAGATTATTGTTG
GTGGAAAGAAGGTCACCGATGATTACCATACACAGGCTGCGAGGGAGCGT
GGAGATGTCGAAGGCGAACTTGCCGTCCCTGAAGATAAGCTCCCTCCTCC
AGGCGAACCTTACAACAAGAACCAGTACGTAGCCTGGCACGGTGCCAGTA
GTGTCTATCACACCAGCGCCCCGTCGGTGCCTTTGCCCACCGGAAAGGCG
GTGGATTCGAAGAAGCGCAAGGTCACGGTTACTGGCGATAACTGGATGCT
CGAACATGCTCGAGAGGCGAGCAACTTCAACTCGCTCATATCGCTTGCGC
GCCGCGAAAACCTTGAAGGACAGTACGACATCCATACAAACGTCATGCAG
TACCCCAAGATCATGCAACCGACTCATGCCCGCTGGGAGCGTCTGCCTCC
TCCCGACCCTCGAGTTGCAACCAAATTAGCTCAGGGCATGTCCACGTTGA
GCCTGACGAACGGCACCGGCGAAGCAGAGCCAGCTGCTGCGGACAAAGAA
GCCCACGAACCCAGCGACAGCCAAACCGAACAACACACCACCGAGTCTTC
CCTCTTCTCCTCAGTTCCGGCTGCGCTTTCCCGCCGATTTGCCATTCATG
ACATTCAGTTCGAATCTTCGCCGTATTCCAACCTGGGCGTTCCCGGCCCA
GACGGCGATGTGCACGATCTCGGCTCCAACGGCCTCATCAGTGTCGCCGA
CTCCGCAAATCCCGAGTTTACGAGCCCCGAAATCCTGGAGGAACTTCCTC
CTGAGTGCAAGGAAGCCCTTATCGAGGCGGCTGCGCAAGAGTGGGAATGG
AAATCCAAGTGGTGCCACGAAGCGAACGACGGGGCTCGCGCCAAATTACT
CAAGAGTTACGCTTGGTTTCCATGAATGGCTAGGAAACTTCGTGCGGCTG
CTCAAGCAGCTGCGCAATCAATGCGGAATGCCGCCCCTCCGCTCCCCGAT
GCCTCGGACGAGGAGATGATCGAAGCACCCCCATCGCGTGGATCATCACC
AGCGATGGAAGATCCAGGAGATGCTTCGGATAAGGATCCTGAGGCGGAAG
CCCAGGCAGAACCCAGCCAGGAGGAAGAGACAGCCGCAACACCCGCCCAG
GATTCAAACCCTCCATCGCGCGGCGACACTCCTTCACGCATGGGTGGCCG
CATGTCAGCCATCCCGCGAAAGCGCCGCATAGGTCGTCCCCCGAAGAACC
GTCCCCCAGACTGGGATGCGCCTGATGACGGCGCCCCTCAGACACCGATC
CATACGTCCACGCCGGTCAAGCGCAGACGTGGTCGTCCCGCTGCTAGTGG
TGGAAGGTGGGCACGTAACCGGGGCCCGTCGCATGTTACCCAGGTTCCGA
TCGACAAGGAGGGGAACATGATGGACGTTATCGACGACGAAGTTGCCCTC
CCAGACGACCCCGAGGGCGAGACGAAGGTGGACAAGAACGGCAATCTACT
GGGCGATCGAGAATATAGGGTCCGTGTGTTTACGATTCTCAACCGTGGAG
ATCGCAAATACATGTTGTCTACTGAGCCTGCGCGATGCATTGGTTTCAGG
GACTCGTACCTTTTCTTCCAGAAGCACAAACTACTGTATAAAATCATCAT
CGACGACGAGGCGAAACGCGACCTCATTGAACGGGAAATTATCCCCCACT
CTTACAAAGGCCGAGCTATCGGTGTCGTCACCGCTCGGTCTGTCTTCCGC
GAATTCGGCGCAAAGATTATTGTTGGTGGAAAGAAGGTCACCGATGATTA
CCATACACAGGCTGCGAGGGAGCGTGGAGATGTCGAAGGCGAACTTGCCG
TCCCTGAAGATAAGCTCCCTCCTCCAGGCGAACCTTACAACAAGAACCAG
TACGTAGCCTGGCACGGTGCCAGTAGTGTCTATCACACCAGCGCCCCGTC
GGTGCCTTTGCCCACCGGAAAGGCGGTGGATTCGAAGAAGCGCAAGGTCA
CGGTTACTGGCGATAACTGGATGCTCGAACATGCTCGAGAGGCGAGCAAC
TTCAACTCGCTCATATCGCTTGCGCGCCGCGAAAACCTTGAAGGACAGTA
CGACATCCATACAAACGTCATGCAGTACCCCAAGATCATGCAACCGACTC
ATGCCCGCTGGGAGCGTCTGCCTCCTCCCGACCCTCGAGTTGCAACCAAA
TTAGCTCAGGGCATGTCCACGTTGAGCCTGACGAACGGCACCGGCGAAGC
AGAGCCAGCTGCTGCGGACAAAGAAGCCCACGAACCCAGCGACAGCCAAA
CCGAACAACACACCACCGAGTCTTCCCTCTTCTCCTCAGTTCCGGCTGCG
CTTTCCCGCCGATTTGCCATTCATGACATTCAGTTCGAATCTTCGCCGTA
TTCCAACCTGGGCGTTCCCGGCCCAGACGGCGATGTGCACGATCTCGGCT
CCAACGGCCTCATCAGTGTCGCCGACTCCGCAAATCCCGAGTTTACGAGC
CCCGAAATCCTGGAGGAACTTCCTCCTGAGTGCAAGGAAGCCCTTATCGA
GGCGGCTGCGCAAGAGTGGGAATGGAAATCCAAGTGGTGCCACGAAGCGA
ACGACGGGGCTCGCGCCAAATTACTCAAGAGTTACGCTTGGTTTCCATGA
ATGGCTAGGAAACTTCGTGCGGCTGCTCAAGCAGCTGCGCAATCAATGCG
GAATGCCGCCCCTCCGCTCCCCGATGCCTCGGACGAGGAGATGATCGAAG
CACCCCCATCGCGTGGATCATCACCAGCGATGGAAGATCCAGGAGATGCT
TCGGATAAGGATCCTGAGGCGGAAGCCCAGGCAGAACCCAGCCAGGAGGA
AGAGACAGCCGCAACACCCGCCCAGGATTCAAACCCTCCATCGCGCGGCG
ACACTCCTTCACGCATGGGTGGCCGCATGTCAGCCATCCCGCGAAAGCGC
CGCATAGGTCGTCCCCCGAAGAACCGTCCCCCAGACTGGGATGCGCCTGA
TGACGGCGCCCCTCAGACACCGATCCATACGTCCACGCCGGTCAAGCGCA
GACGTGGTCGTCCCGCTGCTAGTGGTGGAAGGTGGGCACGTAACCGGGGC
CCGTCGCATGTTACCCAGGTTCCGATCGACAAGGAGGGGAACATGATGGA
CGTTATCGACGACGAAGTTGCCCTCCCAGACGACCCCGAGGGCGAGACGA
AGGTGGACAAGAACGGCAATCTACTGGGCGATCGAGAATATAGGGTCCGT
GTGTTTACGATTCTCAACCGTGGAGATCGCAAATACATGTTGTCTACTGA
GCCTGCGCGATGCATTGGTTTCAGGGACTCGTACCTTTTCTTCCAGAAGC
ACAAACTACTGTATAAAATCATCATCGACGACGAGGCGAAACGCGACCTC
ATTGAACGGGAAATTATCCCCCACTCTTACAAAGGCCGAGCTATCGGTGT
CGTCACCGCTCGGTCTGTCTTCCGCGAATTCGGCGCAAAGATTATTGTTG
GTGGAAAGAAGGTCACCGATGATTACCATACACAGGCTGCGAGGGAGCGT
GGAGATGTCGAAGGCGAACTTGCCGTCCCTGAAGATAAGCTCCCTCCTCC
AGGCGAACCTTACAACAAGAACCAGTACGTAGCCTGGCACGGTGCCAGTA
GTGTCTATCACACCAGCGCCCCGTCGGTGCCTTTGCCCACCGGAAAGGCG
GTGGATTCGAAGAAGCGCAAGGTCACGGTTACTGGCGATAACTGGATGCT
CGAACATGCTCGAGAGGCGAGCAACTTCAACTCGCTCATATCGCTTGCGC
GCCGCGAAAACCTTGAAGGACAGTACGACATCCATACAAACGTCATGCAG
TACCCCAAGATCATGCAACCGACTCATGCCCGCTGGGAGCGTCTGCCTCC
TCCCGACCCTCGAGTTGCAACCAAATTAGCTCAGGGCATGTCCACGTTGA
GCCTGACGAACGGCACCGGCGAAGCAGAGCCAGCTGCTGCGGACAAAGAA
GCCCACGAACCCAGCGACAGCCAAACCGAACAACACACCACCGAGTCTTC
CCTCTTCTCCTCAGTTCCGGCTGCGCTTTCCCGCCGATTTGCCATTCATG
ACATTCAGTTCGAATCTTCGCCGTATTCCAACCTGGGCGTTCCCGGCCCA
GACGGCGATGTGCACGATCTCGGCTCCAACGGCCTCATCAGTGTCGCCGA
CTCCGCAAATCCCGAGTTTACGAGCCCCGAAATCCTGGAGGAACTTCCTC
CTGAGTGCAAGGAAGCCCTTATCGAGGCGGCTGCGCAAGAGTGGGAATGG
AAATCCAAGTGGTGCCACGAAGCGAACGACGGGGCTCGCGCCAAATTACT
CAAGAGTTACGCTTGGTTTCCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011661-T2.utr5p1 | KJC3_011661-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011661-T2.utr3p1 | KJC3_011661-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013933 |
| DBxref | PFAM:PF08624 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1256082..1259100 + |
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