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KJC3_011662-T1, KJC3_011662-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011662-T1
Unique NameKJC3_011662-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1259392..1260985-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011662-T1 ID=KJC3_011662-T1|Name=KJC3_011662-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1594bp|location=Sequence derived from alignment at ch8:1259392..1260985- (Aspergillus niger KJC3)
GCTCTTCTCTCGTCTCGAACTTTCTTATCACTCTCTCTCTGTTTTCCTGG
CGCTTATCAAGGACCGCTGCCTTGCTCGACCTGGTCTAGGTGACTCGGAG
CTGATCGCCTCCCGCACCCATCACCAGGATAAACACCGTCCAGCGATCTC
TCACCGATCCCGCCCCGTTGCCACGGACCATCATCTCTTCCCATCCCACC
TTCCACCGATTCCAGACCCGTCGTTACACTTCTTCCCGACTCAACACCAA
CAACTTCCCCCATCGGACGTCGGATCACCCGTCCCTAGCATAACCTCGAT
CACCGCAATAGCAACCGCTCTCTATCACAGCCTAATCAAACCCCATACAC
CCTTATCAACATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGA
AAGATGCGCCCAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGATATG
CTCCAAAAGCGCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGATGC
AATTGCTCGGAAGAACGTAACGTCAAACAAGGCCGGTAGGTGACAGCAGA
AAAACAGCAACTAGGCAACAACAAATGATGTCTAACGGGTTATTGATCTG
TATAGCGGCTAAGAACGCCCTTCGACGGAAGAAGGTTCATGAGAAGAACC
TCGAACAGACGACGGCGCAGATCGTTCAGCTAGAACAGCAGATCTACTCG
ATTGAGGCGGCGAATATCAACCAGGAGACTTTGAAGGCTATGGAGGCGGC
TGGTGCGGCGATGGCGAAGATCCATGGCTCCATGACGCTTGATACGGTGG
ATCAGACAATGTATGTTGTTTCGTTACGGTATCATTTGAGTGATGGGAAC
ACGGCAACTGACTATGGTCTAGGGATACACTTCGCGAACAGCACCAACTC
AGCACCGAAATCGCACAAGCCATTACAAGCACCAATCTGGTCGACCAACC
AGACGAGGCCGATTTGGAAGAGGAACTCGAGGGCTTGGAGCAGGAGGCCA
TGGACGAGCGGATGCTCAACACAGGTACGGTGCCGGTTGCAGACCAACTC
AACCGTTTACCTCCTGCGGCAAATGGAGAAAGTAAGCCACTGTCCCTCCC
TCTTTACTATGAAACTCTTCTAACGTACATGCAACAGTCAAATCCAAACC
TCAGACCGAAGAGGAAGACGAGGAAGCAGAACTGGAGAAGCTACGTGCGG
AAATGGCCATGGGATAACTGCCCAACTAGCTATTGTGTTTTCCTCCAATT
CCTACAGACTCGGGTTTCTTTCATTTTTCCTGCTCTTTTAATCATATGTG
TCAAAGAACATTGCTGCCTCAACCGTTTTGATTGATTGCGTTATTTGCGG
CCTTGGAGTTAGTTACTTTCTATTACTTGAATCCTTGCATGATGGAATGA
ATCATTGTCTACTTACTCTCTTGTTGTCGAGTACATTGGCTAGTAGAGTT
TGAATTGTGTAGCTGATCCTTAATACACAGTATACACGAATACATCAATT
GTATCTCTACCTCGTTCGAATGTATTACGTCCACATGTACTCCTGCAGCC
TTGTCTACTACTACTCATAGTAATCATGCTGCCTAGAACCCATC
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Coding sequence (CDS) from alignment at ch8:1259392..1260985-

>KJC3_011662-T1 ID=KJC3_011662-T1|Name=KJC3_011662-T1|organism=Aspergillus niger KJC3|type=CDS|length=2676bp|location=Sequence derived from alignment at ch8:1259392..1260985- (Aspergillus niger KJC3)
TCAAATCCAAACCTCAGACCGAAGAGGAAGACGAGGAAGCAGAACTGGAG
AAGCTACGTGCGGAAATGGCCATGGGATAAGGATACACTTCGCGAACAGC
ACCAACTCAGCACCGAAATCGCACAAGCCATTACAAGCACCAATCTGGTC
GACCAACCAGACGAGGCCGATTTGGAAGAGGAACTCGAGGGCTTGGAGCA
GGAGGCCATGGACGAGCGGATGCTCAACACAGGTACGGTGCCGGTTGCAG
ACCAACTCAACCGTTTACCTCCTGCGGCAAATGGAGAAACGGCTAAGAAC
GCCCTTCGACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGACGACGGC
GCAGATCGTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCGGCGAATA
TCAACCAGGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGCGATGGCG
AAGATCCATGGCTCCATGACGCTTGATACGGTGGATCAGACAATATGTGG
TCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGCCCAAGAA
TGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAGCGCGAGA
AGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCGGAAGAAC
GTAACGTCAAACAAGGCCGTCAAATCCAAACCTCAGACCGAAGAGGAAGA
CGAGGAAGCAGAACTGGAGAAGCTACGTGCGGAAATGGCCATGGGATAAG
GATACACTTCGCGAACAGCACCAACTCAGCACCGAAATCGCACAAGCCAT
TACAAGCACCAATCTGGTCGACCAACCAGACGAGGCCGATTTGGAAGAGG
AACTCGAGGGCTTGGAGCAGGAGGCCATGGACGAGCGGATGCTCAACACA
GGTACGGTGCCGGTTGCAGACCAACTCAACCGTTTACCTCCTGCGGCAAA
TGGAGAAACGGCTAAGAACGCCCTTCGACGGAAGAAGGTTCATGAGAAGA
ACCTCGAACAGACGACGGCGCAGATCGTTCAGCTAGAACAGCAGATCTAC
TCGATTGAGGCGGCGAATATCAACCAGGAGACTTTGAAGGCTATGGAGGC
GGCTGGTGCGGCGATGGCGAAGATCCATGGCTCCATGACGCTTGATACGG
TGGATCAGACAATATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGC
GGAAAGATGCGCCCAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGAT
ATGCTCCAAAAGCGCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGA
TGCAATTGCTCGGAAGAACGTAACGTCAAACAAGGCCGTCAAATCCAAAC
CTCAGACCGAAGAGGAAGACGAGGAAGCAGAACTGGAGAAGCTACGTGCG
GAAATGGCCATGGGATAAGGATACACTTCGCGAACAGCACCAACTCAGCA
CCGAAATCGCACAAGCCATTACAAGCACCAATCTGGTCGACCAACCAGAC
GAGGCCGATTTGGAAGAGGAACTCGAGGGCTTGGAGCAGGAGGCCATGGA
CGAGCGGATGCTCAACACAGGTACGGTGCCGGTTGCAGACCAACTCAACC
GTTTACCTCCTGCGGCAAATGGAGAAACGGCTAAGAACGCCCTTCGACGG
AAGAAGGTTCATGAGAAGAACCTCGAACAGACGACGGCGCAGATCGTTCA
GCTAGAACAGCAGATCTACTCGATTGAGGCGGCGAATATCAACCAGGAGA
CTTTGAAGGCTATGGAGGCGGCTGGTGCGGCGATGGCGAAGATCCATGGC
TCCATGACGCTTGATACGGTGGATCAGACAATATGTGGTCTTGGTTCGGC
GGATCCGCCGCTCAGAAGCGGAAAGATGCGCCCAAGAATGCGATCCTCAT
GCTTCGCGAGCAGCTGGATATGCTCCAAAAGCGCGAGAAGCATTTGGAGA
ATCTGATGGAGGAGCAGGATGCAATTGCTCGGAAGAACGTAACGTCAAAC
AAGGCCGTCAAATCCAAACCTCAGACCGAAGAGGAAGACGAGGAAGCAGA
ACTGGAGAAGCTACGTGCGGAAATGGCCATGGGATAAGGATACACTTCGC
GAACAGCACCAACTCAGCACCGAAATCGCACAAGCCATTACAAGCACCAA
TCTGGTCGACCAACCAGACGAGGCCGATTTGGAAGAGGAACTCGAGGGCT
TGGAGCAGGAGGCCATGGACGAGCGGATGCTCAACACAGGTACGGTGCCG
GTTGCAGACCAACTCAACCGTTTACCTCCTGCGGCAAATGGAGAAACGGC
TAAGAACGCCCTTCGACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGA
CGACGGCGCAGATCGTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCG
GCGAATATCAACCAGGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGC
GATGGCGAAGATCCATGGCTCCATGACGCTTGATACGGTGGATCAGACAA
TATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGC
CCAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAG
CGCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCG
GAAGAACGTAACGTCAAACAAGGCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SNF7KJC3_011662Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011662-T1KJC3_011662-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011662-T1.cdsKJC3_011662-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011662-T1.utr3p1KJC3_011662-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011662-T1.exon4KJC3_011662-T1.exon4Aspergillus niger KJC3exon
KJC3_011662-T1.exon3KJC3_011662-T1.exon3Aspergillus niger KJC3exon
KJC3_011662-T1.exon2KJC3_011662-T1.exon2Aspergillus niger KJC3exon
KJC3_011662-T1.exon1KJC3_011662-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011662-T1.utr5p1KJC3_011662-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264W71
DBxrefInterPro:IPR005024
DBxrefPFAM:PF03357
ProductESCRT-III subunit protein snf7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1259392..1260985 -
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